Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 KRT8P51-201ENST00000438938 274 ntBASIC4.3□□□□□ -1.72
LITAFQ99732 ARF4P4-201ENST00000439608 520 ntBASIC4.3□□□□□ -1.72
LITAFQ99732 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC4.3□□□□□ -1.72
LITAFQ99732 RPL6P5-201ENST00000445678 828 ntBASIC4.3□□□□□ -1.72
LITAFQ99732 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC4.3□□□□□ -1.72
LITAFQ99732 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
LITAFQ99732 AL591379.2-201ENST00000450223 397 ntBASIC4.3□□□□□ -1.72
LITAFQ99732 AL021154.1-201ENST00000451217 456 ntTSL 3 BASIC4.3□□□□□ -1.72
LITAFQ99732 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC4.3□□□□□ -1.72
LITAFQ99732 AC022415.1-202ENST00000486612 523 ntBASIC4.3□□□□□ -1.72
LITAFQ99732 AC079594.1-201ENST00000489757 331 ntBASIC4.3□□□□□ -1.72
LITAFQ99732 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.3□□□□□ -1.72
LITAFQ99732 AC021491.1-201ENST00000502300 349 ntTSL 5 BASIC4.3□□□□□ -1.72
LITAFQ99732 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
LITAFQ99732 AC021106.1-201ENST00000509020 1058 ntBASIC4.3□□□□□ -1.72
LITAFQ99732 AC108103.1-201ENST00000511286 446 ntBASIC4.3□□□□□ -1.72
LITAFQ99732 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
LITAFQ99732 DCAF13P2-201ENST00000514188 555 ntBASIC4.3□□□□□ -1.72
LITAFQ99732 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC4.3□□□□□ -1.72
LITAFQ99732 AC097486.1-201ENST00000515331 210 ntBASIC4.3□□□□□ -1.72
LITAFQ99732 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC4.3□□□□□ -1.72
LITAFQ99732 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.3□□□□□ -1.72
LITAFQ99732 AP003032.1-201ENST00000526730 277 ntTSL 3 BASIC4.3□□□□□ -1.72
LITAFQ99732 UBTFL10-201ENST00000528532 562 ntBASIC4.3□□□□□ -1.72
LITAFQ99732 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.3□□□□□ -1.72
LITAFQ99732 MRPS36P5-201ENST00000551909 298 ntBASIC4.3□□□□□ -1.72
LITAFQ99732 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC4.3□□□□□ -1.72
LITAFQ99732 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC4.3□□□□□ -1.72
LITAFQ99732 AC021755.3-201ENST00000560376 864 ntTSL 5 BASIC4.3□□□□□ -1.72
LITAFQ99732 RN7SL155P-201ENST00000581538 263 ntBASIC4.3□□□□□ -1.72
LITAFQ99732 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC4.3□□□□□ -1.72
LITAFQ99732 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC4.3□□□□□ -1.72
LITAFQ99732 LINC01255-203ENST00000587189 591 ntTSL 4 BASIC4.3□□□□□ -1.72
LITAFQ99732 SNRPCP20-201ENST00000588011 210 ntBASIC4.3□□□□□ -1.72
LITAFQ99732 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.3□□□□□ -1.72
LITAFQ99732 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC4.3□□□□□ -1.72
LITAFQ99732 AC008751.2-201ENST00000597885 980 ntBASIC4.3□□□□□ -1.72
LITAFQ99732 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.3□□□□□ -1.72
LITAFQ99732 AL049840.5-201ENST00000602827 552 ntBASIC4.3□□□□□ -1.72
LITAFQ99732 AC073137.1-201ENST00000605636 634 ntBASIC4.3□□□□□ -1.72
LITAFQ99732 RN7SL760P-201ENST00000607344 270 ntBASIC4.3□□□□□ -1.72
LITAFQ99732 AC106052.1-201ENST00000608029 497 ntBASIC4.3□□□□□ -1.72
LITAFQ99732 AL022324.3-201ENST00000609330 747 ntBASIC4.3□□□□□ -1.72
LITAFQ99732 AC093673.2-201ENST00000609674 331 ntBASIC4.3□□□□□ -1.72
LITAFQ99732 AC009309.1-201ENST00000610262 460 ntBASIC4.3□□□□□ -1.72
LITAFQ99732 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC4.3□□□□□ -1.72
LITAFQ99732 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC4.3□□□□□ -1.72
LITAFQ99732 AL161420.1-201ENST00000619393 264 ntBASIC4.3□□□□□ -1.72
LITAFQ99732 AC006386.1-201ENST00000619436 415 ntBASIC4.3□□□□□ -1.72
LITAFQ99732 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.3□□□□□ -1.72
LITAFQ99732 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
LITAFQ99732 AP002791.1-201ENST00000623291 381 ntBASIC4.3□□□□□ -1.72
LITAFQ99732 AC087894.3-201ENST00000623682 349 ntBASIC4.3□□□□□ -1.72
LITAFQ99732 AC104073.4-201ENST00000632111 598 ntTSL 2 BASIC4.3□□□□□ -1.72
LITAFQ99732 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.3□□□□□ -1.72
LITAFQ99732 AC083865.1-201ENST00000636634 831 ntBASIC4.3□□□□□ -1.72
LITAFQ99732 AC017104.5-201ENST00000637647 639 ntBASIC4.3□□□□□ -1.72
LITAFQ99732 CASC19-274ENST00000642018 970 ntBASIC4.3□□□□□ -1.72
LITAFQ99732 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC4.3□□□□□ -1.72
LITAFQ99732 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
LITAFQ99732 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
LITAFQ99732 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC4.3□□□□□ -1.72
LITAFQ99732 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC4.3□□□□□ -1.72
LITAFQ99732 FGG-204ENST00000405164 1539 ntTSL 5 BASIC4.3□□□□□ -1.72
LITAFQ99732 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
LITAFQ99732 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LITAFQ99732 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
LITAFQ99732 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
LITAFQ99732 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
LITAFQ99732 NLN-202ENST00000502464 8354 ntTSL 5 BASIC4.3□□□□□ -1.72
LITAFQ99732 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
LITAFQ99732 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC4.3□□□□□ -1.72
LITAFQ99732 MFSD8-220ENST00000641243 1422 ntBASIC4.29□□□□□ -1.72
LITAFQ99732 AC078880.4-201ENST00000617627 1749 ntBASIC4.29□□□□□ -1.72
LITAFQ99732 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC4.29□□□□□ -1.72
LITAFQ99732 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC4.29□□□□□ -1.72
LITAFQ99732 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
LITAFQ99732 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
LITAFQ99732 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
LITAFQ99732 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC4.29□□□□□ -1.72
LITAFQ99732 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC4.29□□□□□ -1.72
LITAFQ99732 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
LITAFQ99732 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
LITAFQ99732 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
LITAFQ99732 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
LITAFQ99732 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
LITAFQ99732 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC4.29□□□□□ -1.72
LITAFQ99732 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC4.29□□□□□ -1.72
LITAFQ99732 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
LITAFQ99732 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
LITAFQ99732 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
LITAFQ99732 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
LITAFQ99732 RNA5SP478-201ENST00000364657 115 ntBASIC4.29□□□□□ -1.72
LITAFQ99732 SNORA70.5-201ENST00000365519 135 ntBASIC4.29□□□□□ -1.72
LITAFQ99732 CST13P-201ENST00000376992 428 ntBASIC4.29□□□□□ -1.72
LITAFQ99732 MIR181C-201ENST00000384881 110 ntBASIC4.29□□□□□ -1.72
LITAFQ99732 RNA5SP297-201ENST00000391029 113 ntBASIC4.29□□□□□ -1.72
LITAFQ99732 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.29□□□□□ -1.72
LITAFQ99732 RN7SKP194-201ENST00000411328 351 ntBASIC4.29□□□□□ -1.72
LITAFQ99732 Z68694.1-201ENST00000413929 841 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms