Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC6.31□□□□□ -1.4
VPS50Q96JG6 RPS3AP49-201ENST00000472161 790 ntBASIC6.31□□□□□ -1.4
VPS50Q96JG6 RN7SL413P-201ENST00000482700 297 ntBASIC6.31□□□□□ -1.4
VPS50Q96JG6 OR9N1P-201ENST00000491296 333 ntBASIC6.31□□□□□ -1.4
VPS50Q96JG6 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC6.31□□□□□ -1.4
VPS50Q96JG6 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC6.31□□□□□ -1.4
VPS50Q96JG6 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC6.31□□□□□ -1.4
VPS50Q96JG6 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC6.31□□□□□ -1.4
VPS50Q96JG6 IGHV3-57-201ENST00000520143 280 ntBASIC6.31□□□□□ -1.4
VPS50Q96JG6 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC6.31□□□□□ -1.4
VPS50Q96JG6 AP003102.1-201ENST00000525638 661 ntBASIC6.31□□□□□ -1.4
VPS50Q96JG6 AP003033.2-201ENST00000528901 805 ntBASIC6.31□□□□□ -1.4
VPS50Q96JG6 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC6.31□□□□□ -1.4
VPS50Q96JG6 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC6.31□□□□□ -1.4
VPS50Q96JG6 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC6.31□□□□□ -1.4
VPS50Q96JG6 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC6.31□□□□□ -1.4
VPS50Q96JG6 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC6.31□□□□□ -1.4
VPS50Q96JG6 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC6.31□□□□□ -1.4
VPS50Q96JG6 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC6.31□□□□□ -1.4
VPS50Q96JG6 PPATP2-201ENST00000605635 508 ntBASIC6.31□□□□□ -1.4
VPS50Q96JG6 AC009779.8-202ENST00000607990 932 ntBASIC6.31□□□□□ -1.4
VPS50Q96JG6 AL391834.1-201ENST00000609609 560 ntBASIC6.31□□□□□ -1.4
VPS50Q96JG6 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.31□□□□□ -1.4
VPS50Q96JG6 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC6.31□□□□□ -1.4
VPS50Q96JG6 TCL6_3.1-201ENST00000619064 137 ntBASIC6.31□□□□□ -1.4
VPS50Q96JG6 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
VPS50Q96JG6 AC140134.1-201ENST00000511830 3544 ntBASIC6.31□□□□□ -1.4
VPS50Q96JG6 AC079753.1-201ENST00000623243 3868 ntBASIC6.31□□□□□ -1.4
VPS50Q96JG6 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
VPS50Q96JG6 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.31□□□□□ -1.4
VPS50Q96JG6 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC6.31□□□□□ -1.4
VPS50Q96JG6 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC6.31□□□□□ -1.4
VPS50Q96JG6 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
VPS50Q96JG6 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.31□□□□□ -1.4
VPS50Q96JG6 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
VPS50Q96JG6 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.3□□□□□ -1.4
VPS50Q96JG6 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
VPS50Q96JG6 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
VPS50Q96JG6 AC015799.1-201ENST00000622996 3122 ntBASIC6.3□□□□□ -1.4
VPS50Q96JG6 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
VPS50Q96JG6 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
VPS50Q96JG6 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
VPS50Q96JG6 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
VPS50Q96JG6 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC6.3□□□□□ -1.4
VPS50Q96JG6 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC6.3□□□□□ -1.4
VPS50Q96JG6 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
VPS50Q96JG6 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
VPS50Q96JG6 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.3□□□□□ -1.4
VPS50Q96JG6 RNU4-39P-201ENST00000362455 127 ntBASIC6.3□□□□□ -1.4
VPS50Q96JG6 RNA5SP188-201ENST00000362916 129 ntBASIC6.3□□□□□ -1.4
VPS50Q96JG6 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
VPS50Q96JG6 CCNB2P1-201ENST00000399411 1150 ntBASIC6.3□□□□□ -1.4
VPS50Q96JG6 VIM2P-201ENST00000402383 1294 ntBASIC6.3□□□□□ -1.4
VPS50Q96JG6 NPM1P37-201ENST00000403105 874 ntBASIC6.3□□□□□ -1.4
VPS50Q96JG6 UBTFL2-201ENST00000411859 1191 ntBASIC6.3□□□□□ -1.4
VPS50Q96JG6 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC6.3□□□□□ -1.4
VPS50Q96JG6 RANP6-201ENST00000413691 644 ntBASIC6.3□□□□□ -1.4
VPS50Q96JG6 AL359885.1-201ENST00000415786 903 ntBASIC6.3□□□□□ -1.4
VPS50Q96JG6 AL929472.1-201ENST00000417484 429 ntBASIC6.3□□□□□ -1.4
VPS50Q96JG6 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.3□□□□□ -1.4
VPS50Q96JG6 RPL12P43-201ENST00000420608 499 ntBASIC6.3□□□□□ -1.4
VPS50Q96JG6 FAM183DP-201ENST00000421987 399 ntBASIC6.3□□□□□ -1.4
VPS50Q96JG6 AC073464.3-201ENST00000422564 712 ntBASIC6.3□□□□□ -1.4
VPS50Q96JG6 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC6.3□□□□□ -1.4
VPS50Q96JG6 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC6.3□□□□□ -1.4
VPS50Q96JG6 AC017019.1-201ENST00000426129 261 ntBASIC6.3□□□□□ -1.4
VPS50Q96JG6 AC023141.6-201ENST00000429418 337 ntBASIC6.3□□□□□ -1.4
VPS50Q96JG6 AL392003.1-201ENST00000434394 243 ntBASIC6.3□□□□□ -1.4
VPS50Q96JG6 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC6.3□□□□□ -1.4
VPS50Q96JG6 GAPDHP37-201ENST00000442317 968 ntBASIC6.3□□□□□ -1.4
VPS50Q96JG6 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC6.3□□□□□ -1.4
VPS50Q96JG6 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC6.3□□□□□ -1.4
VPS50Q96JG6 YRDCP3-201ENST00000456507 480 ntBASIC6.3□□□□□ -1.4
VPS50Q96JG6 AC083806.1-201ENST00000468934 316 ntBASIC6.3□□□□□ -1.4
VPS50Q96JG6 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.3□□□□□ -1.4
VPS50Q96JG6 AC012123.2-201ENST00000485809 248 ntBASIC6.3□□□□□ -1.4
VPS50Q96JG6 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC6.3□□□□□ -1.4
VPS50Q96JG6 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC6.3□□□□□ -1.4
VPS50Q96JG6 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
VPS50Q96JG6 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
VPS50Q96JG6 OR9G2P-201ENST00000533326 880 ntBASIC6.3□□□□□ -1.4
VPS50Q96JG6 AC124891.1-201ENST00000536322 519 ntBASIC6.3□□□□□ -1.4
VPS50Q96JG6 AC007068.2-201ENST00000543168 395 ntBASIC6.3□□□□□ -1.4
VPS50Q96JG6 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC6.3□□□□□ -1.4
VPS50Q96JG6 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC6.3□□□□□ -1.4
VPS50Q96JG6 AC005519.1-201ENST00000554490 601 ntBASIC6.3□□□□□ -1.4
VPS50Q96JG6 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
VPS50Q96JG6 WDR61-205ENST00000558459 884 ntTSL 3 BASIC6.3□□□□□ -1.4
VPS50Q96JG6 AC106785.3-201ENST00000564064 847 ntBASIC6.3□□□□□ -1.4
VPS50Q96JG6 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC6.3□□□□□ -1.4
VPS50Q96JG6 AP003115.1-201ENST00000569849 463 ntBASIC6.3□□□□□ -1.4
VPS50Q96JG6 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.3□□□□□ -1.4
VPS50Q96JG6 CTSLP2-201ENST00000580501 394 ntBASIC6.3□□□□□ -1.4
VPS50Q96JG6 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC6.3□□□□□ -1.4
VPS50Q96JG6 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC6.3□□□□□ -1.4
VPS50Q96JG6 AC011500.1-201ENST00000601963 469 ntBASIC6.3□□□□□ -1.4
VPS50Q96JG6 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC6.3□□□□□ -1.4
VPS50Q96JG6 AC026979.4-201ENST00000606555 645 ntBASIC6.3□□□□□ -1.4
VPS50Q96JG6 AL355802.4-201ENST00000607635 548 ntBASIC6.3□□□□□ -1.4
VPS50Q96JG6 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms