Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC7.57□□□□□ -1.2
CHMP4CQ96CF2 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
CHMP4CQ96CF2 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CHMP4CQ96CF2 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC7.57□□□□□ -1.2
CHMP4CQ96CF2 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CHMP4CQ96CF2 OR11H13P-201ENST00000359695 979 ntBASIC7.57□□□□□ -1.2
CHMP4CQ96CF2 RN7SKP237-201ENST00000364663 301 ntBASIC7.57□□□□□ -1.2
CHMP4CQ96CF2 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
CHMP4CQ96CF2 SNORA11.3-201ENST00000408471 128 ntBASIC7.57□□□□□ -1.2
CHMP4CQ96CF2 ARAFP1-201ENST00000422172 605 ntBASIC7.57□□□□□ -1.2
CHMP4CQ96CF2 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC7.57□□□□□ -1.2
CHMP4CQ96CF2 AC017019.1-201ENST00000426129 261 ntBASIC7.57□□□□□ -1.2
CHMP4CQ96CF2 AL390879.2-203ENST00000426943 1121 ntBASIC7.57□□□□□ -1.2
CHMP4CQ96CF2 BMP6P1-201ENST00000431230 679 ntBASIC7.57□□□□□ -1.2
CHMP4CQ96CF2 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC7.57□□□□□ -1.2
CHMP4CQ96CF2 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC7.57□□□□□ -1.2
CHMP4CQ96CF2 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC7.57□□□□□ -1.2
CHMP4CQ96CF2 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC7.57□□□□□ -1.2
CHMP4CQ96CF2 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CHMP4CQ96CF2 AC118758.1-202ENST00000454719 225 ntBASIC7.57□□□□□ -1.2
CHMP4CQ96CF2 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC7.57□□□□□ -1.2
CHMP4CQ96CF2 HMGN1P17-201ENST00000513734 295 ntBASIC7.57□□□□□ -1.2
CHMP4CQ96CF2 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC7.57□□□□□ -1.2
CHMP4CQ96CF2 AC011853.1-201ENST00000518911 454 ntBASIC7.57□□□□□ -1.2
CHMP4CQ96CF2 BCAS2P1-201ENST00000528022 632 ntBASIC7.57□□□□□ -1.2
CHMP4CQ96CF2 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC7.57□□□□□ -1.2
CHMP4CQ96CF2 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC7.57□□□□□ -1.2
CHMP4CQ96CF2 LINC00557-201ENST00000563184 1279 ntBASIC7.57□□□□□ -1.2
CHMP4CQ96CF2 AC090616.1-201ENST00000583895 447 ntBASIC7.57□□□□□ -1.2
CHMP4CQ96CF2 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC7.57□□□□□ -1.2
CHMP4CQ96CF2 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC7.57□□□□□ -1.2
CHMP4CQ96CF2 SNORA11.6-201ENST00000619030 128 ntBASIC7.57□□□□□ -1.2
CHMP4CQ96CF2 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CHMP4CQ96CF2 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC7.57□□□□□ -1.2
CHMP4CQ96CF2 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
CHMP4CQ96CF2 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC7.57□□□□□ -1.2
CHMP4CQ96CF2 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC7.57□□□□□ -1.2
CHMP4CQ96CF2 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CHMP4CQ96CF2 AL591135.1-201ENST00000401578 5914 ntBASIC7.57□□□□□ -1.2
CHMP4CQ96CF2 AC110373.1-201ENST00000505994 3505 ntBASIC7.56□□□□□ -1.2
CHMP4CQ96CF2 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC7.56□□□□□ -1.2
CHMP4CQ96CF2 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC7.56□□□□□ -1.2
CHMP4CQ96CF2 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CHMP4CQ96CF2 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC7.56□□□□□ -1.2
CHMP4CQ96CF2 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CHMP4CQ96CF2 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CHMP4CQ96CF2 RN7SKP187-201ENST00000365536 330 ntBASIC7.56□□□□□ -1.2
CHMP4CQ96CF2 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
CHMP4CQ96CF2 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC7.56□□□□□ -1.2
CHMP4CQ96CF2 OR7E156P-201ENST00000400303 464 ntBASIC7.56□□□□□ -1.2
CHMP4CQ96CF2 RPS17P17-201ENST00000419392 409 ntBASIC7.56□□□□□ -1.2
CHMP4CQ96CF2 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC7.56□□□□□ -1.2
CHMP4CQ96CF2 RPS6P14-201ENST00000425165 719 ntBASIC7.56□□□□□ -1.2
CHMP4CQ96CF2 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC7.56□□□□□ -1.2
CHMP4CQ96CF2 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC7.56□□□□□ -1.2
CHMP4CQ96CF2 AP000949.1-201ENST00000438328 629 ntBASIC7.56□□□□□ -1.2
CHMP4CQ96CF2 CXCR2P1-202ENST00000443392 1074 ntBASIC7.56□□□□□ -1.2
CHMP4CQ96CF2 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CHMP4CQ96CF2 CYCSP53-201ENST00000455540 265 ntBASIC7.56□□□□□ -1.2
CHMP4CQ96CF2 AC002075.1-201ENST00000457396 676 ntBASIC7.56□□□□□ -1.2
CHMP4CQ96CF2 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC7.56□□□□□ -1.2
CHMP4CQ96CF2 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC7.56□□□□□ -1.2
CHMP4CQ96CF2 AC016687.1-201ENST00000482574 353 ntBASIC7.56□□□□□ -1.2
CHMP4CQ96CF2 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC7.56□□□□□ -1.2
CHMP4CQ96CF2 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC7.56□□□□□ -1.2
CHMP4CQ96CF2 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC7.56□□□□□ -1.2
CHMP4CQ96CF2 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CHMP4CQ96CF2 AC005000.1-201ENST00000536192 288 ntBASIC7.56□□□□□ -1.2
CHMP4CQ96CF2 RPL3P13-201ENST00000550415 216 ntBASIC7.56□□□□□ -1.2
CHMP4CQ96CF2 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC7.56□□□□□ -1.2
CHMP4CQ96CF2 TPRX1P1-201ENST00000557620 319 ntBASIC7.56□□□□□ -1.2
CHMP4CQ96CF2 SNORA74.4-201ENST00000607595 199 ntBASIC7.56□□□□□ -1.2
CHMP4CQ96CF2 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC7.56□□□□□ -1.2
CHMP4CQ96CF2 AL391262.2-201ENST00000622466 494 ntBASIC7.56□□□□□ -1.2
CHMP4CQ96CF2 AC022726.2-201ENST00000634673 547 ntBASIC7.56□□□□□ -1.2
CHMP4CQ96CF2 AC010325.3-201ENST00000641084 394 ntBASIC7.56□□□□□ -1.2
CHMP4CQ96CF2 USP46-202ENST00000451218 4622 ntTSL 5 BASIC7.56□□□□□ -1.2
CHMP4CQ96CF2 CDY11P-201ENST00000447168 1651 ntBASIC7.56□□□□□ -1.2
CHMP4CQ96CF2 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CHMP4CQ96CF2 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
CHMP4CQ96CF2 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC7.56□□□□□ -1.2
CHMP4CQ96CF2 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
CHMP4CQ96CF2 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC7.55□□□□□ -1.2
CHMP4CQ96CF2 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
CHMP4CQ96CF2 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CHMP4CQ96CF2 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC7.55□□□□□ -1.2
CHMP4CQ96CF2 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC7.55□□□□□ -1.2
CHMP4CQ96CF2 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC7.55□□□□□ -1.2
CHMP4CQ96CF2 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC7.55□□□□□ -1.2
CHMP4CQ96CF2 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
CHMP4CQ96CF2 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC7.55□□□□□ -1.2
CHMP4CQ96CF2 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
CHMP4CQ96CF2 RNU6-152P-201ENST00000384037 107 ntBASIC7.55□□□□□ -1.2
CHMP4CQ96CF2 CAV1-204ENST00000393470 598 ntTSL 4 BASIC7.55□□□□□ -1.2
CHMP4CQ96CF2 AL157702.1-201ENST00000398764 426 ntBASIC7.55□□□□□ -1.2
CHMP4CQ96CF2 RNA5SP115-201ENST00000411160 107 ntBASIC7.55□□□□□ -1.2
CHMP4CQ96CF2 AC116036.1-201ENST00000412199 367 ntBASIC7.55□□□□□ -1.2
CHMP4CQ96CF2 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CHMP4CQ96CF2 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CHMP4CQ96CF2 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC7.55□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms