Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC7.23□□□□□ -1.25
ERCC4Q92889 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC7.23□□□□□ -1.25
ERCC4Q92889 AL512637.2-201ENST00000431287 1256 ntBASIC7.23□□□□□ -1.25
ERCC4Q92889 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC7.23□□□□□ -1.25
ERCC4Q92889 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC7.23□□□□□ -1.25
ERCC4Q92889 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC7.23□□□□□ -1.25
ERCC4Q92889 RPS10P14-201ENST00000440748 502 ntBASIC7.23□□□□□ -1.25
ERCC4Q92889 REG1CP-206ENST00000447469 496 ntBASIC7.23□□□□□ -1.25
ERCC4Q92889 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC7.23□□□□□ -1.25
ERCC4Q92889 CR383656.1-201ENST00000484916 377 ntBASIC7.23□□□□□ -1.25
ERCC4Q92889 OR9N1P-201ENST00000491296 333 ntBASIC7.23□□□□□ -1.25
ERCC4Q92889 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
ERCC4Q92889 RNU6-1102P-201ENST00000516149 96 ntBASIC7.23□□□□□ -1.25
ERCC4Q92889 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC7.23□□□□□ -1.25
ERCC4Q92889 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC7.23□□□□□ -1.25
ERCC4Q92889 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC7.23□□□□□ -1.25
ERCC4Q92889 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
ERCC4Q92889 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC7.23□□□□□ -1.25
ERCC4Q92889 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC7.23□□□□□ -1.25
ERCC4Q92889 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC7.23□□□□□ -1.25
ERCC4Q92889 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC7.23□□□□□ -1.25
ERCC4Q92889 RN7SL475P-201ENST00000583379 298 ntBASIC7.23□□□□□ -1.25
ERCC4Q92889 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC7.23□□□□□ -1.25
ERCC4Q92889 RPL29P33-201ENST00000587474 316 ntBASIC7.23□□□□□ -1.25
ERCC4Q92889 AL137246.2-201ENST00000613439 662 ntBASIC7.23□□□□□ -1.25
ERCC4Q92889 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
ERCC4Q92889 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC7.23□□□□□ -1.25
ERCC4Q92889 AL132640.3-201ENST00000630473 177 ntBASIC7.23□□□□□ -1.25
ERCC4Q92889 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
ERCC4Q92889 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC7.23□□□□□ -1.25
ERCC4Q92889 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC7.23□□□□□ -1.25
ERCC4Q92889 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC7.23□□□□□ -1.25
ERCC4Q92889 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC7.23□□□□□ -1.25
ERCC4Q92889 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
ERCC4Q92889 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
ERCC4Q92889 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC7.23□□□□□ -1.25
ERCC4Q92889 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
ERCC4Q92889 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
ERCC4Q92889 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
ERCC4Q92889 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC7.22□□□□□ -1.25
ERCC4Q92889 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC7.22□□□□□ -1.25
ERCC4Q92889 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
ERCC4Q92889 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
ERCC4Q92889 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
ERCC4Q92889 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
ERCC4Q92889 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
ERCC4Q92889 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
ERCC4Q92889 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
ERCC4Q92889 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC7.22□□□□□ -1.25
ERCC4Q92889 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
ERCC4Q92889 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
ERCC4Q92889 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
ERCC4Q92889 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
ERCC4Q92889 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
ERCC4Q92889 RNA5SP140-201ENST00000364524 92 ntBASIC7.22□□□□□ -1.25
ERCC4Q92889 RN7SKP191-201ENST00000364713 306 ntBASIC7.22□□□□□ -1.25
ERCC4Q92889 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
ERCC4Q92889 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
ERCC4Q92889 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
ERCC4Q92889 RNU6-1000P-201ENST00000391066 106 ntBASIC7.22□□□□□ -1.25
ERCC4Q92889 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC7.22□□□□□ -1.25
ERCC4Q92889 OR52N3P-201ENST00000413417 934 ntBASIC7.22□□□□□ -1.25
ERCC4Q92889 RPLP1P10-201ENST00000413972 339 ntBASIC7.22□□□□□ -1.25
ERCC4Q92889 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC7.22□□□□□ -1.25
ERCC4Q92889 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC7.22□□□□□ -1.25
ERCC4Q92889 OR5W1P-201ENST00000423705 938 ntBASIC7.22□□□□□ -1.25
ERCC4Q92889 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC7.22□□□□□ -1.25
ERCC4Q92889 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC7.22□□□□□ -1.25
ERCC4Q92889 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC7.22□□□□□ -1.25
ERCC4Q92889 AC122714.1-201ENST00000502510 459 ntBASIC7.22□□□□□ -1.25
ERCC4Q92889 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC7.22□□□□□ -1.25
ERCC4Q92889 AC010468.3-201ENST00000508225 458 ntBASIC7.22□□□□□ -1.25
ERCC4Q92889 AC093325.1-201ENST00000508378 326 ntBASIC7.22□□□□□ -1.25
ERCC4Q92889 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC7.22□□□□□ -1.25
ERCC4Q92889 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC7.22□□□□□ -1.25
ERCC4Q92889 DPPA3P2-202ENST00000557188 1219 ntBASIC7.22□□□□□ -1.25
ERCC4Q92889 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC7.22□□□□□ -1.25
ERCC4Q92889 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC7.22□□□□□ -1.25
ERCC4Q92889 AC090286.3-201ENST00000573133 187 ntBASIC7.22□□□□□ -1.25
ERCC4Q92889 MTATP6P24-201ENST00000576835 677 ntBASIC7.22□□□□□ -1.25
ERCC4Q92889 RN7SL208P-201ENST00000577964 296 ntBASIC7.22□□□□□ -1.25
ERCC4Q92889 AC233702.7-202ENST00000582941 211 ntBASIC7.22□□□□□ -1.25
ERCC4Q92889 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC7.22□□□□□ -1.25
ERCC4Q92889 ZNF92P2-201ENST00000600543 1059 ntBASIC7.22□□□□□ -1.25
ERCC4Q92889 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC7.22□□□□□ -1.25
ERCC4Q92889 AC023762.1-201ENST00000603280 584 ntBASIC7.22□□□□□ -1.25
ERCC4Q92889 RPS4XP21-201ENST00000603814 750 ntBASIC7.22□□□□□ -1.25
ERCC4Q92889 AC005828.7-201ENST00000607331 556 ntBASIC7.22□□□□□ -1.25
ERCC4Q92889 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC7.22□□□□□ -1.25
ERCC4Q92889 MIR6070-201ENST00000613967 103 ntBASIC7.22□□□□□ -1.25
ERCC4Q92889 IGKV2OR2-10-201ENST00000613976 311 ntBASIC7.22□□□□□ -1.25
ERCC4Q92889 AC140725.3-201ENST00000616193 880 ntBASIC7.22□□□□□ -1.25
ERCC4Q92889 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
ERCC4Q92889 AC068057.2-201ENST00000624047 895 ntBASIC7.22□□□□□ -1.25
ERCC4Q92889 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC7.22□□□□□ -1.25
ERCC4Q92889 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
ERCC4Q92889 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
ERCC4Q92889 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
ERCC4Q92889 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC7.22□□□□□ -1.25
ERCC4Q92889 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC7.22□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms