Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SHROOM3Q8TF72 RPSAP65-201ENST00000429660 595 ntBASIC6.17□□□□□ -1.42
SHROOM3Q8TF72 FABP7P2-201ENST00000429946 379 ntBASIC6.17□□□□□ -1.42
SHROOM3Q8TF72 AP000281.1-201ENST00000444036 316 ntBASIC6.17□□□□□ -1.42
SHROOM3Q8TF72 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC6.17□□□□□ -1.42
SHROOM3Q8TF72 SSX6-203ENST00000509958 336 ntTSL 3 BASIC6.17□□□□□ -1.42
SHROOM3Q8TF72 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.17□□□□□ -1.42
SHROOM3Q8TF72 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC6.17□□□□□ -1.42
SHROOM3Q8TF72 AC090424.1-201ENST00000535243 736 ntBASIC6.17□□□□□ -1.42
SHROOM3Q8TF72 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.17□□□□□ -1.42
SHROOM3Q8TF72 AL645933.2-201ENST00000606743 1207 ntBASIC6.17□□□□□ -1.42
SHROOM3Q8TF72 AC004836.1-201ENST00000623032 634 ntBASIC6.17□□□□□ -1.42
SHROOM3Q8TF72 AL357140.4-201ENST00000636827 412 ntBASIC6.17□□□□□ -1.42
SHROOM3Q8TF72 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
SHROOM3Q8TF72 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SHROOM3Q8TF72 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SHROOM3Q8TF72 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.16□□□□□ -1.42
SHROOM3Q8TF72 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SHROOM3Q8TF72 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SHROOM3Q8TF72 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
SHROOM3Q8TF72 AL662795.2-201ENST00000624252 3706 ntBASIC6.16□□□□□ -1.42
SHROOM3Q8TF72 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SHROOM3Q8TF72 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SHROOM3Q8TF72 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC6.16□□□□□ -1.42
SHROOM3Q8TF72 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
SHROOM3Q8TF72 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.16□□□□□ -1.42
SHROOM3Q8TF72 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
SHROOM3Q8TF72 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SHROOM3Q8TF72 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.16□□□□□ -1.42
SHROOM3Q8TF72 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SHROOM3Q8TF72 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.16□□□□□ -1.42
SHROOM3Q8TF72 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.16□□□□□ -1.42
SHROOM3Q8TF72 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.16□□□□□ -1.42
SHROOM3Q8TF72 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.16□□□□□ -1.42
SHROOM3Q8TF72 MORF4L1P4-201ENST00000450245 976 ntBASIC6.16□□□□□ -1.42
SHROOM3Q8TF72 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC6.16□□□□□ -1.42
SHROOM3Q8TF72 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.16□□□□□ -1.42
SHROOM3Q8TF72 AC092593.2-201ENST00000513866 913 ntBASIC6.16□□□□□ -1.42
SHROOM3Q8TF72 RNA5SP340-201ENST00000517132 107 ntBASIC6.16□□□□□ -1.42
SHROOM3Q8TF72 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC6.16□□□□□ -1.42
SHROOM3Q8TF72 AL390726.5-202ENST00000564800 256 ntBASIC6.16□□□□□ -1.42
SHROOM3Q8TF72 TEX41-218ENST00000596540 882 ntTSL 5 BASIC6.16□□□□□ -1.42
SHROOM3Q8TF72 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC6.16□□□□□ -1.42
SHROOM3Q8TF72 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.16□□□□□ -1.42
SHROOM3Q8TF72 AL049767.1-202ENST00000637826 242 ntBASIC6.16□□□□□ -1.42
SHROOM3Q8TF72 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
SHROOM3Q8TF72 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
SHROOM3Q8TF72 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SHROOM3Q8TF72 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
SHROOM3Q8TF72 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.16□□□□□ -1.42
SHROOM3Q8TF72 USP40-202ENST00000409945 1946 ntTSL 2 BASIC6.16□□□□□ -1.42
SHROOM3Q8TF72 GNL2P1-201ENST00000451274 2190 ntBASIC6.16□□□□□ -1.42
SHROOM3Q8TF72 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.16□□□□□ -1.42
SHROOM3Q8TF72 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.16□□□□□ -1.42
SHROOM3Q8TF72 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SHROOM3Q8TF72 AC011416.1-201ENST00000514947 1732 ntBASIC6.16□□□□□ -1.42
SHROOM3Q8TF72 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.16□□□□□ -1.42
SHROOM3Q8TF72 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SHROOM3Q8TF72 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SHROOM3Q8TF72 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC6.15□□□□□ -1.42
SHROOM3Q8TF72 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SHROOM3Q8TF72 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
SHROOM3Q8TF72 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SHROOM3Q8TF72 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SHROOM3Q8TF72 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SHROOM3Q8TF72 MYL6P5-201ENST00000412707 459 ntBASIC6.15□□□□□ -1.42
SHROOM3Q8TF72 AC007562.1-201ENST00000421819 517 ntBASIC6.15□□□□□ -1.42
SHROOM3Q8TF72 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SHROOM3Q8TF72 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC6.15□□□□□ -1.42
SHROOM3Q8TF72 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC6.15□□□□□ -1.42
SHROOM3Q8TF72 OR2L9P-201ENST00000444456 913 ntBASIC6.15□□□□□ -1.42
SHROOM3Q8TF72 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.15□□□□□ -1.42
SHROOM3Q8TF72 AC023274.2-201ENST00000445264 521 ntBASIC6.15□□□□□ -1.42
SHROOM3Q8TF72 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC6.15□□□□□ -1.42
SHROOM3Q8TF72 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC6.15□□□□□ -1.42
SHROOM3Q8TF72 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC6.15□□□□□ -1.42
SHROOM3Q8TF72 AC010547.6-201ENST00000571789 193 ntBASIC6.15□□□□□ -1.42
SHROOM3Q8TF72 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC6.15□□□□□ -1.42
SHROOM3Q8TF72 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SHROOM3Q8TF72 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.15□□□□□ -1.42
SHROOM3Q8TF72 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SHROOM3Q8TF72 LCOR-201ENST00000286067 4542 ntBASIC6.15□□□□□ -1.42
SHROOM3Q8TF72 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.15□□□□□ -1.42
SHROOM3Q8TF72 AC123769.1-201ENST00000530992 3192 ntBASIC6.15□□□□□ -1.42
SHROOM3Q8TF72 AC009831.5-201ENST00000624000 3189 ntBASIC6.15□□□□□ -1.42
SHROOM3Q8TF72 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SHROOM3Q8TF72 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SHROOM3Q8TF72 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
SHROOM3Q8TF72 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.15□□□□□ -1.42
SHROOM3Q8TF72 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
SHROOM3Q8TF72 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.15□□□□□ -1.43
SHROOM3Q8TF72 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.15□□□□□ -1.43
SHROOM3Q8TF72 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SHROOM3Q8TF72 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SHROOM3Q8TF72 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
SHROOM3Q8TF72 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
SHROOM3Q8TF72 RPS17P17-201ENST00000419392 409 ntBASIC6.15□□□□□ -1.43
SHROOM3Q8TF72 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.15□□□□□ -1.43
SHROOM3Q8TF72 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.15□□□□□ -1.43
SHROOM3Q8TF72 IGLV3-4-201ENST00000432300 244 ntBASIC6.15□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms