Protein–RNA interactions for Protein: Q7L7L0

HIST3H2A, Histone H2A type 3, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2AQ7L7L0 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HIST3H2AQ7L7L0 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
HIST3H2AQ7L7L0 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.68□□□□□ -1.5
HIST3H2AQ7L7L0 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.68□□□□□ -1.5
HIST3H2AQ7L7L0 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.68□□□□□ -1.5
HIST3H2AQ7L7L0 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
HIST3H2AQ7L7L0 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HIST3H2AQ7L7L0 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HIST3H2AQ7L7L0 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HIST3H2AQ7L7L0 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HIST3H2AQ7L7L0 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HIST3H2AQ7L7L0 RNU1-59P-201ENST00000364829 162 ntBASIC5.68□□□□□ -1.5
HIST3H2AQ7L7L0 TINAG-202ENST00000370864 692 ntTSL 2 BASIC5.68□□□□□ -1.5
HIST3H2AQ7L7L0 SMARCE1P1-201ENST00000417747 1186 ntBASIC5.68□□□□□ -1.5
HIST3H2AQ7L7L0 AC007562.1-201ENST00000421819 517 ntBASIC5.68□□□□□ -1.5
HIST3H2AQ7L7L0 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.68□□□□□ -1.5
HIST3H2AQ7L7L0 MTND4LP7-201ENST00000431728 294 ntBASIC5.68□□□□□ -1.5
HIST3H2AQ7L7L0 EMC3-AS1-205ENST00000438698 534 ntBASIC5.68□□□□□ -1.5
HIST3H2AQ7L7L0 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC5.68□□□□□ -1.5
HIST3H2AQ7L7L0 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.68□□□□□ -1.5
HIST3H2AQ7L7L0 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC5.68□□□□□ -1.5
HIST3H2AQ7L7L0 AC023274.2-201ENST00000445264 521 ntBASIC5.68□□□□□ -1.5
HIST3H2AQ7L7L0 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HIST3H2AQ7L7L0 RANP2-201ENST00000456833 229 ntBASIC5.68□□□□□ -1.5
HIST3H2AQ7L7L0 AL022319.1-201ENST00000458183 1167 ntBASIC5.68□□□□□ -1.5
HIST3H2AQ7L7L0 NFU1-207ENST00000462320 558 ntTSL 4 BASIC5.68□□□□□ -1.5
HIST3H2AQ7L7L0 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
HIST3H2AQ7L7L0 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.68□□□□□ -1.5
HIST3H2AQ7L7L0 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC5.68□□□□□ -1.5
HIST3H2AQ7L7L0 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC5.68□□□□□ -1.5
HIST3H2AQ7L7L0 AC093815.1-201ENST00000508637 280 ntBASIC5.68□□□□□ -1.5
HIST3H2AQ7L7L0 AC093664.1-201ENST00000511779 289 ntBASIC5.68□□□□□ -1.5
HIST3H2AQ7L7L0 RFPL4AP3-201ENST00000515267 345 ntBASIC5.68□□□□□ -1.5
HIST3H2AQ7L7L0 RNA5SP418-201ENST00000515951 117 ntBASIC5.68□□□□□ -1.5
HIST3H2AQ7L7L0 IGHV4-55-201ENST00000520889 368 ntBASIC5.68□□□□□ -1.5
HIST3H2AQ7L7L0 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HIST3H2AQ7L7L0 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.68□□□□□ -1.5
HIST3H2AQ7L7L0 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.68□□□□□ -1.5
HIST3H2AQ7L7L0 AC009729.1-201ENST00000548873 1133 ntBASIC5.68□□□□□ -1.5
HIST3H2AQ7L7L0 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HIST3H2AQ7L7L0 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC5.68□□□□□ -1.5
HIST3H2AQ7L7L0 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC5.68□□□□□ -1.5
HIST3H2AQ7L7L0 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HIST3H2AQ7L7L0 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.68□□□□□ -1.5
HIST3H2AQ7L7L0 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
HIST3H2AQ7L7L0 AC005332.4-201ENST00000592752 579 ntBASIC5.68□□□□□ -1.5
HIST3H2AQ7L7L0 U91328.4-201ENST00000608919 517 ntBASIC5.68□□□□□ -1.5
HIST3H2AQ7L7L0 AC084036.1-201ENST00000609190 508 ntBASIC5.68□□□□□ -1.5
HIST3H2AQ7L7L0 U1.25-201ENST00000614085 162 ntBASIC5.68□□□□□ -1.5
HIST3H2AQ7L7L0 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.68□□□□□ -1.5
HIST3H2AQ7L7L0 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC5.68□□□□□ -1.5
HIST3H2AQ7L7L0 U1.34-201ENST00000618578 162 ntBASIC5.68□□□□□ -1.5
HIST3H2AQ7L7L0 U1.31-201ENST00000620022 160 ntBASIC5.68□□□□□ -1.5
HIST3H2AQ7L7L0 LINC00216-201ENST00000623548 1126 ntBASIC5.68□□□□□ -1.5
HIST3H2AQ7L7L0 AL162377.2-201ENST00000624532 337 ntBASIC5.68□□□□□ -1.5
HIST3H2AQ7L7L0 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.68□□□□□ -1.5
HIST3H2AQ7L7L0 TEX41-279ENST00000629149 609 ntTSL 5 BASIC5.68□□□□□ -1.5
HIST3H2AQ7L7L0 OR7E91P-202ENST00000642062 1198 ntBASIC5.68□□□□□ -1.5
HIST3H2AQ7L7L0 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
HIST3H2AQ7L7L0 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.68□□□□□ -1.5
HIST3H2AQ7L7L0 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HIST3H2AQ7L7L0 MSL3P1-202ENST00000440028 1468 ntBASIC5.68□□□□□ -1.5
HIST3H2AQ7L7L0 CNOT6LP1-201ENST00000559681 1462 ntBASIC5.68□□□□□ -1.5
HIST3H2AQ7L7L0 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HIST3H2AQ7L7L0 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HIST3H2AQ7L7L0 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HIST3H2AQ7L7L0 OR10AB1P-202ENST00000641219 1686 ntBASIC5.68□□□□□ -1.5
HIST3H2AQ7L7L0 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.68□□□□□ -1.5
HIST3H2AQ7L7L0 AC092724.1-201ENST00000624623 3397 ntBASIC5.68□□□□□ -1.5
HIST3H2AQ7L7L0 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.68□□□□□ -1.5
HIST3H2AQ7L7L0 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC5.68□□□□□ -1.5
HIST3H2AQ7L7L0 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HIST3H2AQ7L7L0 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
HIST3H2AQ7L7L0 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.67□□□□□ -1.5
HIST3H2AQ7L7L0 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC5.67□□□□□ -1.5
HIST3H2AQ7L7L0 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.67□□□□□ -1.5
HIST3H2AQ7L7L0 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
HIST3H2AQ7L7L0 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HIST3H2AQ7L7L0 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.67□□□□□ -1.5
HIST3H2AQ7L7L0 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.67□□□□□ -1.5
HIST3H2AQ7L7L0 AP000432.2-201ENST00000624164 2048 ntBASIC5.67□□□□□ -1.5
HIST3H2AQ7L7L0 CREM-203ENST00000344351 1625 ntTSL 2 BASIC5.67□□□□□ -1.5
HIST3H2AQ7L7L0 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HIST3H2AQ7L7L0 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HIST3H2AQ7L7L0 AC027575.3-201ENST00000583058 2747 ntBASIC5.67□□□□□ -1.5
HIST3H2AQ7L7L0 GGA1-205ENST00000405147 575 ntTSL 4 BASIC5.67□□□□□ -1.5
HIST3H2AQ7L7L0 RPS26P38-201ENST00000414476 348 ntBASIC5.67□□□□□ -1.5
HIST3H2AQ7L7L0 AL360013.1-201ENST00000419031 858 ntBASIC5.67□□□□□ -1.5
HIST3H2AQ7L7L0 AC013470.3-201ENST00000420252 1194 ntBASIC5.67□□□□□ -1.5
HIST3H2AQ7L7L0 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.67□□□□□ -1.5
HIST3H2AQ7L7L0 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.67□□□□□ -1.5
HIST3H2AQ7L7L0 MTCO1P51-201ENST00000427672 1060 ntBASIC5.67□□□□□ -1.5
HIST3H2AQ7L7L0 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC5.67□□□□□ -1.5
HIST3H2AQ7L7L0 MTCO1P45-201ENST00000431457 267 ntBASIC5.67□□□□□ -1.5
HIST3H2AQ7L7L0 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC5.67□□□□□ -1.5
HIST3H2AQ7L7L0 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HIST3H2AQ7L7L0 POU5F1P5-201ENST00000445059 658 ntBASIC5.67□□□□□ -1.5
HIST3H2AQ7L7L0 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.67□□□□□ -1.5
HIST3H2AQ7L7L0 PPIAP32-201ENST00000449940 472 ntBASIC5.67□□□□□ -1.5
HIST3H2AQ7L7L0 AC015524.1-201ENST00000491585 472 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms