Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.69□□□□□ -1.5
H3F3CQ6NXT2 FO681491.1-202ENST00000623392 737 ntBASIC5.69□□□□□ -1.5
H3F3CQ6NXT2 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
H3F3CQ6NXT2 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
H3F3CQ6NXT2 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
H3F3CQ6NXT2 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
H3F3CQ6NXT2 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
H3F3CQ6NXT2 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.69□□□□□ -1.5
H3F3CQ6NXT2 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
H3F3CQ6NXT2 AC008627.1-201ENST00000517511 1704 ntBASIC5.68□□□□□ -1.5
H3F3CQ6NXT2 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.68□□□□□ -1.5
H3F3CQ6NXT2 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
H3F3CQ6NXT2 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
H3F3CQ6NXT2 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
H3F3CQ6NXT2 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
H3F3CQ6NXT2 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
H3F3CQ6NXT2 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.68□□□□□ -1.5
H3F3CQ6NXT2 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
H3F3CQ6NXT2 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
H3F3CQ6NXT2 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.68□□□□□ -1.5
H3F3CQ6NXT2 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC5.68□□□□□ -1.5
H3F3CQ6NXT2 SUGT1P2-201ENST00000379452 992 ntBASIC5.68□□□□□ -1.5
H3F3CQ6NXT2 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
H3F3CQ6NXT2 HMGN1P20-201ENST00000411849 300 ntBASIC5.68□□□□□ -1.5
H3F3CQ6NXT2 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
H3F3CQ6NXT2 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC5.68□□□□□ -1.5
H3F3CQ6NXT2 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC5.68□□□□□ -1.5
H3F3CQ6NXT2 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC5.68□□□□□ -1.5
H3F3CQ6NXT2 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.68□□□□□ -1.5
H3F3CQ6NXT2 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC5.68□□□□□ -1.5
H3F3CQ6NXT2 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.68□□□□□ -1.5
H3F3CQ6NXT2 OR13K1P-201ENST00000444577 975 ntBASIC5.68□□□□□ -1.5
H3F3CQ6NXT2 AC005077.1-201ENST00000449226 375 ntBASIC5.68□□□□□ -1.5
H3F3CQ6NXT2 AC084754.1-201ENST00000463466 464 ntBASIC5.68□□□□□ -1.5
H3F3CQ6NXT2 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
H3F3CQ6NXT2 RN7SL165P-201ENST00000477476 291 ntBASIC5.68□□□□□ -1.5
H3F3CQ6NXT2 AC092865.4-201ENST00000477936 615 ntBASIC5.68□□□□□ -1.5
H3F3CQ6NXT2 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.68□□□□□ -1.5
H3F3CQ6NXT2 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.68□□□□□ -1.5
H3F3CQ6NXT2 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC5.68□□□□□ -1.5
H3F3CQ6NXT2 AP003396.4-201ENST00000527574 265 ntBASIC5.68□□□□□ -1.5
H3F3CQ6NXT2 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.68□□□□□ -1.5
H3F3CQ6NXT2 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.68□□□□□ -1.5
H3F3CQ6NXT2 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.68□□□□□ -1.5
H3F3CQ6NXT2 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.68□□□□□ -1.5
H3F3CQ6NXT2 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.68□□□□□ -1.5
H3F3CQ6NXT2 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5.68□□□□□ -1.5
H3F3CQ6NXT2 AC004836.1-201ENST00000623032 634 ntBASIC5.68□□□□□ -1.5
H3F3CQ6NXT2 AC009120.7-201ENST00000623452 780 ntBASIC5.68□□□□□ -1.5
H3F3CQ6NXT2 AC018628.1-201ENST00000624147 3819 ntBASIC5.68□□□□□ -1.5
H3F3CQ6NXT2 AC022726.2-201ENST00000634673 547 ntBASIC5.68□□□□□ -1.5
H3F3CQ6NXT2 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
H3F3CQ6NXT2 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
H3F3CQ6NXT2 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
H3F3CQ6NXT2 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
H3F3CQ6NXT2 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
H3F3CQ6NXT2 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.68□□□□□ -1.5
H3F3CQ6NXT2 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.68□□□□□ -1.5
H3F3CQ6NXT2 CREM-217ENST00000439705 2306 ntTSL 5 BASIC5.68□□□□□ -1.5
H3F3CQ6NXT2 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
H3F3CQ6NXT2 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.68□□□□□ -1.5
H3F3CQ6NXT2 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC5.67□□□□□ -1.5
H3F3CQ6NXT2 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
H3F3CQ6NXT2 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
H3F3CQ6NXT2 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
H3F3CQ6NXT2 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
H3F3CQ6NXT2 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.67□□□□□ -1.5
H3F3CQ6NXT2 AC015799.1-201ENST00000622996 3122 ntBASIC5.67□□□□□ -1.5
H3F3CQ6NXT2 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
H3F3CQ6NXT2 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
H3F3CQ6NXT2 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
H3F3CQ6NXT2 AC023490.2-201ENST00000359859 470 ntBASIC5.67□□□□□ -1.5
H3F3CQ6NXT2 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.67□□□□□ -1.5
H3F3CQ6NXT2 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
H3F3CQ6NXT2 TRAV35-201ENST00000390462 330 ntBASIC5.67□□□□□ -1.5
H3F3CQ6NXT2 SLC20A1P1-201ENST00000413906 956 ntBASIC5.67□□□□□ -1.5
H3F3CQ6NXT2 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.67□□□□□ -1.5
H3F3CQ6NXT2 SETP9-201ENST00000423837 832 ntBASIC5.67□□□□□ -1.5
H3F3CQ6NXT2 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.67□□□□□ -1.5
H3F3CQ6NXT2 FTLP8-201ENST00000446770 267 ntBASIC5.67□□□□□ -1.5
H3F3CQ6NXT2 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.67□□□□□ -1.5
H3F3CQ6NXT2 CST12P-201ENST00000457644 362 ntBASIC5.67□□□□□ -1.5
H3F3CQ6NXT2 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
H3F3CQ6NXT2 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.67□□□□□ -1.5
H3F3CQ6NXT2 RN7SKP238-201ENST00000516483 249 ntBASIC5.67□□□□□ -1.5
H3F3CQ6NXT2 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.67□□□□□ -1.5
H3F3CQ6NXT2 IGKV2-19-201ENST00000518132 283 ntBASIC5.67□□□□□ -1.5
H3F3CQ6NXT2 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.67□□□□□ -1.5
H3F3CQ6NXT2 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC5.67□□□□□ -1.5
H3F3CQ6NXT2 HNRNPCP1-201ENST00000556181 766 ntBASIC5.67□□□□□ -1.5
H3F3CQ6NXT2 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.67□□□□□ -1.5
H3F3CQ6NXT2 AP005119.1-201ENST00000580956 292 ntBASIC5.67□□□□□ -1.5
H3F3CQ6NXT2 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
H3F3CQ6NXT2 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.67□□□□□ -1.5
H3F3CQ6NXT2 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.67□□□□□ -1.5
H3F3CQ6NXT2 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.67□□□□□ -1.5
H3F3CQ6NXT2 AC108673.3-201ENST00000609183 335 ntBASIC5.67□□□□□ -1.5
H3F3CQ6NXT2 AC096861.1-201ENST00000616652 240 ntBASIC5.67□□□□□ -1.5
H3F3CQ6NXT2 TCL6_3.1-201ENST00000619064 137 ntBASIC5.67□□□□□ -1.5
H3F3CQ6NXT2 AC129915.3-201ENST00000634128 948 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 228.6 ms