Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC5.21□□□□□ -1.58
LRRK2Q5S007 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
LRRK2Q5S007 CTNND1-219ENST00000528621 5907 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LRRK2Q5S007 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LRRK2Q5S007 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LRRK2Q5S007 AC062022.1-201ENST00000451026 1684 ntBASIC5.2□□□□□ -1.58
LRRK2Q5S007 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC5.2□□□□□ -1.58
LRRK2Q5S007 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
LRRK2Q5S007 AC018765.1-201ENST00000623357 3446 ntBASIC5.2□□□□□ -1.58
LRRK2Q5S007 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LRRK2Q5S007 LINC02035-201ENST00000610128 5476 ntBASIC5.2□□□□□ -1.58
LRRK2Q5S007 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC5.2□□□□□ -1.58
LRRK2Q5S007 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LRRK2Q5S007 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
LRRK2Q5S007 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
LRRK2Q5S007 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
LRRK2Q5S007 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LRRK2Q5S007 OR2W4P-201ENST00000406496 926 ntBASIC5.2□□□□□ -1.58
LRRK2Q5S007 AC245014.1-201ENST00000427732 381 ntTSL 5 BASIC5.2□□□□□ -1.58
LRRK2Q5S007 RPL7P56-201ENST00000429441 717 ntBASIC5.2□□□□□ -1.58
LRRK2Q5S007 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.2□□□□□ -1.58
LRRK2Q5S007 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC5.2□□□□□ -1.58
LRRK2Q5S007 AC117395.1-201ENST00000487390 403 ntBASIC5.2□□□□□ -1.58
LRRK2Q5S007 SNORA43.3-201ENST00000517240 103 ntBASIC5.2□□□□□ -1.58
LRRK2Q5S007 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC5.2□□□□□ -1.58
LRRK2Q5S007 TOMM20P2-201ENST00000540082 421 ntBASIC5.2□□□□□ -1.58
LRRK2Q5S007 RBM22P12-201ENST00000567098 1255 ntBASIC5.2□□□□□ -1.58
LRRK2Q5S007 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC5.2□□□□□ -1.58
LRRK2Q5S007 OR7A11P-201ENST00000597719 953 ntBASIC5.2□□□□□ -1.58
LRRK2Q5S007 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.2□□□□□ -1.58
LRRK2Q5S007 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LRRK2Q5S007 CTNNA1P1-201ENST00000515849 2728 ntBASIC5.2□□□□□ -1.58
LRRK2Q5S007 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC5.2□□□□□ -1.58
LRRK2Q5S007 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LRRK2Q5S007 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
LRRK2Q5S007 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LRRK2Q5S007 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LRRK2Q5S007 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC5.2□□□□□ -1.58
LRRK2Q5S007 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
LRRK2Q5S007 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LRRK2Q5S007 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
LRRK2Q5S007 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC5.2□□□□□ -1.58
LRRK2Q5S007 RN7SKP77-201ENST00000363261 353 ntBASIC5.2□□□□□ -1.58
LRRK2Q5S007 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC5.2□□□□□ -1.58
LRRK2Q5S007 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.2□□□□□ -1.58
LRRK2Q5S007 AC073648.4-201ENST00000442655 781 ntBASIC5.2□□□□□ -1.58
LRRK2Q5S007 AC005297.1-201ENST00000444765 862 ntBASIC5.2□□□□□ -1.58
LRRK2Q5S007 AL034399.1-201ENST00000451535 380 ntBASIC5.2□□□□□ -1.58
LRRK2Q5S007 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.2□□□□□ -1.58
LRRK2Q5S007 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.2□□□□□ -1.58
LRRK2Q5S007 IGBP1P1-201ENST00000554337 1009 ntBASIC5.2□□□□□ -1.58
LRRK2Q5S007 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.2□□□□□ -1.58
LRRK2Q5S007 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.2□□□□□ -1.58
LRRK2Q5S007 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC5.2□□□□□ -1.58
LRRK2Q5S007 OR1F2P-201ENST00000570470 933 ntBASIC5.2□□□□□ -1.58
LRRK2Q5S007 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.2□□□□□ -1.58
LRRK2Q5S007 AL359704.2-201ENST00000604335 521 ntBASIC5.2□□□□□ -1.58
LRRK2Q5S007 AC009704.2-201ENST00000618739 483 ntBASIC5.2□□□□□ -1.58
LRRK2Q5S007 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LRRK2Q5S007 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
LRRK2Q5S007 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
LRRK2Q5S007 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
LRRK2Q5S007 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
LRRK2Q5S007 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.19□□□□□ -1.58
LRRK2Q5S007 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC5.19□□□□□ -1.58
LRRK2Q5S007 GC-201ENST00000273951 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LRRK2Q5S007 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LRRK2Q5S007 NACA-203ENST00000454682 6629 ntTSL 5 BASIC5.19□□□□□ -1.58
LRRK2Q5S007 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
LRRK2Q5S007 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.19□□□□□ -1.58
LRRK2Q5S007 RBMY2QP-201ENST00000429799 1147 ntBASIC5.19□□□□□ -1.58
LRRK2Q5S007 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.19□□□□□ -1.58
LRRK2Q5S007 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.19□□□□□ -1.58
LRRK2Q5S007 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.19□□□□□ -1.58
LRRK2Q5S007 RPL31P44-201ENST00000447680 377 ntBASIC5.19□□□□□ -1.58
LRRK2Q5S007 RPL23AP68-201ENST00000480924 445 ntBASIC5.19□□□□□ -1.58
LRRK2Q5S007 SNORA58-201ENST00000505219 137 ntBASIC5.19□□□□□ -1.58
LRRK2Q5S007 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.19□□□□□ -1.58
LRRK2Q5S007 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC5.19□□□□□ -1.58
LRRK2Q5S007 AC119403.2-201ENST00000590960 598 ntBASIC5.19□□□□□ -1.58
LRRK2Q5S007 AC097717.1-225ENST00000600829 709 ntTSL 5 BASIC5.19□□□□□ -1.58
LRRK2Q5S007 KCNMA1-212ENST00000406533 5639 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
LRRK2Q5S007 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LRRK2Q5S007 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LRRK2Q5S007 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LRRK2Q5S007 AC137056.2-201ENST00000624055 1958 ntBASIC5.19□□□□□ -1.58
LRRK2Q5S007 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LRRK2Q5S007 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
LRRK2Q5S007 AC006213.6-201ENST00000623722 4179 ntBASIC5.19□□□□□ -1.58
LRRK2Q5S007 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LRRK2Q5S007 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC5.19□□□□□ -1.58
LRRK2Q5S007 CRB1-202ENST00000367399 3885 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LRRK2Q5S007 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LRRK2Q5S007 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LRRK2Q5S007 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.19□□□□□ -1.58
LRRK2Q5S007 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC5.19□□□□□ -1.58
LRRK2Q5S007 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LRRK2Q5S007 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LRRK2Q5S007 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LRRK2Q5S007 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms