Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC7.26□□□□□ -1.25
RFX7Q2KHR2 COX6CP7-201ENST00000597056 208 ntBASIC7.26□□□□□ -1.25
RFX7Q2KHR2 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
RFX7Q2KHR2 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC7.26□□□□□ -1.25
RFX7Q2KHR2 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC7.26□□□□□ -1.25
RFX7Q2KHR2 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC7.26□□□□□ -1.25
RFX7Q2KHR2 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC7.26□□□□□ -1.25
RFX7Q2KHR2 MVP-219ENST00000629059 120 ntTSL 5 BASIC7.26□□□□□ -1.25
RFX7Q2KHR2 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
RFX7Q2KHR2 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC7.26□□□□□ -1.25
RFX7Q2KHR2 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC7.26□□□□□ -1.25
RFX7Q2KHR2 ZNF101P1-201ENST00000435701 1720 ntBASIC7.26□□□□□ -1.25
RFX7Q2KHR2 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
RFX7Q2KHR2 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC7.26□□□□□ -1.25
RFX7Q2KHR2 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
RFX7Q2KHR2 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
RFX7Q2KHR2 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
RFX7Q2KHR2 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
RFX7Q2KHR2 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
RFX7Q2KHR2 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC7.25□□□□□ -1.25
RFX7Q2KHR2 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
RFX7Q2KHR2 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC7.25□□□□□ -1.25
RFX7Q2KHR2 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
RFX7Q2KHR2 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
RFX7Q2KHR2 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC7.25□□□□□ -1.25
RFX7Q2KHR2 RNU4-64P-201ENST00000410795 131 ntBASIC7.25□□□□□ -1.25
RFX7Q2KHR2 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC7.25□□□□□ -1.25
RFX7Q2KHR2 AC073410.1-201ENST00000435125 589 ntBASIC7.25□□□□□ -1.25
RFX7Q2KHR2 SUMO2P3-201ENST00000438311 288 ntBASIC7.25□□□□□ -1.25
RFX7Q2KHR2 AL161636.2-201ENST00000445179 927 ntBASIC7.25□□□□□ -1.25
RFX7Q2KHR2 HMGN1P36-201ENST00000446623 298 ntBASIC7.25□□□□□ -1.25
RFX7Q2KHR2 RNF19BPY-201ENST00000458209 1550 ntBASIC7.25□□□□□ -1.25
RFX7Q2KHR2 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC7.25□□□□□ -1.25
RFX7Q2KHR2 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC7.25□□□□□ -1.25
RFX7Q2KHR2 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC7.25□□□□□ -1.25
RFX7Q2KHR2 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC7.25□□□□□ -1.25
RFX7Q2KHR2 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC7.25□□□□□ -1.25
RFX7Q2KHR2 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC7.25□□□□□ -1.25
RFX7Q2KHR2 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC7.25□□□□□ -1.25
RFX7Q2KHR2 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC7.25□□□□□ -1.25
RFX7Q2KHR2 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC7.25□□□□□ -1.25
RFX7Q2KHR2 AP003789.1-201ENST00000617737 605 ntBASIC7.25□□□□□ -1.25
RFX7Q2KHR2 AC127024.6-201ENST00000621598 424 ntBASIC7.25□□□□□ -1.25
RFX7Q2KHR2 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC7.25□□□□□ -1.25
RFX7Q2KHR2 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC7.25□□□□□ -1.25
RFX7Q2KHR2 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC7.25□□□□□ -1.25
RFX7Q2KHR2 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
RFX7Q2KHR2 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
RFX7Q2KHR2 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
RFX7Q2KHR2 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
RFX7Q2KHR2 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
RFX7Q2KHR2 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
RFX7Q2KHR2 CR1-204ENST00000367052 7469 ntTSL 5 BASIC7.25□□□□□ -1.25
RFX7Q2KHR2 CR1-205ENST00000367053 7469 ntTSL 5 BASIC7.25□□□□□ -1.25
RFX7Q2KHR2 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC7.25□□□□□ -1.25
RFX7Q2KHR2 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC7.25□□□□□ -1.25
RFX7Q2KHR2 AC093829.1-201ENST00000506662 1618 ntBASIC7.25□□□□□ -1.25
RFX7Q2KHR2 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
RFX7Q2KHR2 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC7.25□□□□□ -1.25
RFX7Q2KHR2 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
RFX7Q2KHR2 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC7.25□□□□□ -1.25
RFX7Q2KHR2 AC015689.2-201ENST00000528172 1738 ntBASIC7.24□□□□□ -1.25
RFX7Q2KHR2 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC7.24□□□□□ -1.25
RFX7Q2KHR2 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
RFX7Q2KHR2 SNORD1C-201ENST00000363315 78 ntBASIC7.24□□□□□ -1.25
RFX7Q2KHR2 TPT1-204ENST00000379060 764 ntTSL 5 BASIC7.24□□□□□ -1.25
RFX7Q2KHR2 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
RFX7Q2KHR2 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
RFX7Q2KHR2 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC7.24□□□□□ -1.25
RFX7Q2KHR2 AC079355.1-201ENST00000421770 223 ntBASIC7.24□□□□□ -1.25
RFX7Q2KHR2 AL365220.1-201ENST00000432923 399 ntBASIC7.24□□□□□ -1.25
RFX7Q2KHR2 AL445928.1-201ENST00000435545 222 ntBASIC7.24□□□□□ -1.25
RFX7Q2KHR2 RPS7P3-201ENST00000443360 580 ntBASIC7.24□□□□□ -1.25
RFX7Q2KHR2 AC124945.1-201ENST00000485133 188 ntBASIC7.24□□□□□ -1.25
RFX7Q2KHR2 RN7SL214P-201ENST00000487317 265 ntBASIC7.24□□□□□ -1.25
RFX7Q2KHR2 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC7.24□□□□□ -1.25
RFX7Q2KHR2 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC7.24□□□□□ -1.25
RFX7Q2KHR2 SETP21-201ENST00000514799 892 ntBASIC7.24□□□□□ -1.25
RFX7Q2KHR2 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC7.24□□□□□ -1.25
RFX7Q2KHR2 AC135626.1-201ENST00000556983 435 ntBASIC7.24□□□□□ -1.25
RFX7Q2KHR2 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC7.24□□□□□ -1.25
RFX7Q2KHR2 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC7.24□□□□□ -1.25
RFX7Q2KHR2 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC7.24□□□□□ -1.25
RFX7Q2KHR2 AC126175.1-201ENST00000617041 758 ntBASIC7.24□□□□□ -1.25
RFX7Q2KHR2 AL357153.4-201ENST00000620487 1016 ntBASIC7.24□□□□□ -1.25
RFX7Q2KHR2 AC069234.4-201ENST00000621276 412 ntBASIC7.24□□□□□ -1.25
RFX7Q2KHR2 AC027088.4-201ENST00000611559 1947 ntBASIC7.24□□□□□ -1.25
RFX7Q2KHR2 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
RFX7Q2KHR2 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC7.24□□□□□ -1.25
RFX7Q2KHR2 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC7.24□□□□□ -1.25
RFX7Q2KHR2 ATP5A1P4-201ENST00000556888 1605 ntBASIC7.24□□□□□ -1.25
RFX7Q2KHR2 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
RFX7Q2KHR2 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC7.24□□□□□ -1.25
RFX7Q2KHR2 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
RFX7Q2KHR2 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC7.24□□□□□ -1.25
RFX7Q2KHR2 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
RFX7Q2KHR2 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC7.24□□□□□ -1.25
RFX7Q2KHR2 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC7.24□□□□□ -1.25
RFX7Q2KHR2 AC010401.2-201ENST00000575137 4934 ntBASIC7.24□□□□□ -1.25
RFX7Q2KHR2 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms