Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.65□□□□□ -1.35
TPM4P67936 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.65□□□□□ -1.35
TPM4P67936 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
TPM4P67936 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
TPM4P67936 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
TPM4P67936 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.64□□□□□ -1.35
TPM4P67936 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.64□□□□□ -1.35
TPM4P67936 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
TPM4P67936 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
TPM4P67936 AC003045.1-201ENST00000398779 713 ntBASIC6.64□□□□□ -1.35
TPM4P67936 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
TPM4P67936 AL360013.1-201ENST00000419031 858 ntBASIC6.64□□□□□ -1.35
TPM4P67936 RPL12P12-201ENST00000424633 501 ntBASIC6.64□□□□□ -1.35
TPM4P67936 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.64□□□□□ -1.35
TPM4P67936 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
TPM4P67936 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC6.64□□□□□ -1.35
TPM4P67936 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.64□□□□□ -1.35
TPM4P67936 NPM1P9-201ENST00000453156 844 ntBASIC6.64□□□□□ -1.35
TPM4P67936 SDC4P-201ENST00000453285 601 ntBASIC6.64□□□□□ -1.35
TPM4P67936 EIF3LP2-201ENST00000457262 807 ntBASIC6.64□□□□□ -1.35
TPM4P67936 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC6.64□□□□□ -1.35
TPM4P67936 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC6.64□□□□□ -1.35
TPM4P67936 AC026782.2-201ENST00000510845 636 ntBASIC6.64□□□□□ -1.35
TPM4P67936 AC135983.3-201ENST00000528049 1226 ntBASIC6.64□□□□□ -1.35
TPM4P67936 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC6.64□□□□□ -1.35
TPM4P67936 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.64□□□□□ -1.35
TPM4P67936 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.64□□□□□ -1.35
TPM4P67936 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC6.64□□□□□ -1.35
TPM4P67936 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC6.64□□□□□ -1.35
TPM4P67936 SNURF-202ENST00000577949 650 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
TPM4P67936 AP001823.1-201ENST00000604056 1003 ntBASIC6.64□□□□□ -1.35
TPM4P67936 AC022167.5-202ENST00000637237 701 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
TPM4P67936 AC119674.1-217ENST00000641942 1086 ntBASIC6.64□□□□□ -1.35
TPM4P67936 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC6.64□□□□□ -1.35
TPM4P67936 UGT2B24P-201ENST00000514441 1597 ntBASIC6.64□□□□□ -1.35
TPM4P67936 CASC19-246ENST00000641625 1606 ntBASIC6.64□□□□□ -1.35
TPM4P67936 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC6.64□□□□□ -1.35
TPM4P67936 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
TPM4P67936 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
TPM4P67936 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
TPM4P67936 KRTAP19-6-201ENST00000334046 330 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
TPM4P67936 AC092634.1-201ENST00000366505 199 ntBASIC6.63□□□□□ -1.35
TPM4P67936 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
TPM4P67936 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
TPM4P67936 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
TPM4P67936 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.63□□□□□ -1.35
TPM4P67936 NMD3P2-201ENST00000421815 761 ntBASIC6.63□□□□□ -1.35
TPM4P67936 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
TPM4P67936 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC6.63□□□□□ -1.35
TPM4P67936 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.63□□□□□ -1.35
TPM4P67936 AC138761.5-201ENST00000433967 325 ntBASIC6.63□□□□□ -1.35
TPM4P67936 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.63□□□□□ -1.35
TPM4P67936 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
TPM4P67936 SEPHS1P4-201ENST00000446112 1176 ntBASIC6.63□□□□□ -1.35
TPM4P67936 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC6.63□□□□□ -1.35
TPM4P67936 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
TPM4P67936 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
TPM4P67936 AC016027.4-201ENST00000450866 277 ntBASIC6.63□□□□□ -1.35
TPM4P67936 RPL12P39-201ENST00000455456 496 ntBASIC6.63□□□□□ -1.35
TPM4P67936 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC6.63□□□□□ -1.35
TPM4P67936 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.63□□□□□ -1.35
TPM4P67936 OR7E157P-201ENST00000494376 911 ntBASIC6.63□□□□□ -1.35
TPM4P67936 RN7SL104P-201ENST00000498686 293 ntBASIC6.63□□□□□ -1.35
TPM4P67936 OR7E99P-201ENST00000505750 922 ntBASIC6.63□□□□□ -1.35
TPM4P67936 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.63□□□□□ -1.35
TPM4P67936 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC6.63□□□□□ -1.35
TPM4P67936 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.63□□□□□ -1.35
TPM4P67936 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC6.63□□□□□ -1.35
TPM4P67936 AC084851.2-201ENST00000530377 364 ntBASIC6.63□□□□□ -1.35
TPM4P67936 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC6.63□□□□□ -1.35
TPM4P67936 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC6.63□□□□□ -1.35
TPM4P67936 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.63□□□□□ -1.35
TPM4P67936 NIFKP4-201ENST00000567275 1192 ntBASIC6.63□□□□□ -1.35
TPM4P67936 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.63□□□□□ -1.35
TPM4P67936 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC6.63□□□□□ -1.35
TPM4P67936 AC068408.1-201ENST00000577406 1144 ntBASIC6.63□□□□□ -1.35
TPM4P67936 AC005323.1-203ENST00000585303 566 ntTSL 5 BASIC6.63□□□□□ -1.35
TPM4P67936 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC6.63□□□□□ -1.35
TPM4P67936 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.63□□□□□ -1.35
TPM4P67936 AL008582.1-201ENST00000609612 442 ntBASIC6.63□□□□□ -1.35
TPM4P67936 AL445670.1-201ENST00000618889 801 ntBASIC6.63□□□□□ -1.35
TPM4P67936 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
TPM4P67936 AC096708.4-201ENST00000620563 552 ntBASIC6.63□□□□□ -1.35
TPM4P67936 MIR6503-201ENST00000622884 86 ntBASIC6.63□□□□□ -1.35
TPM4P67936 AC137056.2-201ENST00000624055 1958 ntBASIC6.63□□□□□ -1.35
TPM4P67936 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.63□□□□□ -1.35
TPM4P67936 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC6.63□□□□□ -1.35
TPM4P67936 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC6.63□□□□□ -1.35
TPM4P67936 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC6.63□□□□□ -1.35
TPM4P67936 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
TPM4P67936 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
TPM4P67936 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
TPM4P67936 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
TPM4P67936 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
TPM4P67936 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
TPM4P67936 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
TPM4P67936 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC6.62□□□□□ -1.35
TPM4P67936 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
TPM4P67936 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
TPM4P67936 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms