Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CDH11P55287 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CDH11P55287 SNORD16-201ENST00000362803 99 ntBASIC5.66□□□□□ -1.5
CDH11P55287 RNA5SP77-201ENST00000365394 120 ntBASIC5.66□□□□□ -1.5
CDH11P55287 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CDH11P55287 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CDH11P55287 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CDH11P55287 CXADRP1-201ENST00000398098 1095 ntBASIC5.66□□□□□ -1.5
CDH11P55287 AL096800.1-201ENST00000405326 893 ntBASIC5.66□□□□□ -1.5
CDH11P55287 TRGV7-201ENST00000427089 353 ntBASIC5.66□□□□□ -1.5
CDH11P55287 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC5.66□□□□□ -1.5
CDH11P55287 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.66□□□□□ -1.5
CDH11P55287 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC5.66□□□□□ -1.5
CDH11P55287 ARMC4P1-201ENST00000438905 707 ntBASIC5.66□□□□□ -1.5
CDH11P55287 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.66□□□□□ -1.5
CDH11P55287 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC5.66□□□□□ -1.5
CDH11P55287 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.66□□□□□ -1.5
CDH11P55287 CTSLP6-201ENST00000458273 1002 ntBASIC5.66□□□□□ -1.5
CDH11P55287 AC104339.1-201ENST00000465478 348 ntBASIC5.66□□□□□ -1.5
CDH11P55287 RN7SL170P-201ENST00000487098 295 ntBASIC5.66□□□□□ -1.5
CDH11P55287 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.66□□□□□ -1.5
CDH11P55287 RPL37P23-201ENST00000492641 294 ntBASIC5.66□□□□□ -1.5
CDH11P55287 AC106822.1-201ENST00000502647 526 ntBASIC5.66□□□□□ -1.5
CDH11P55287 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CDH11P55287 RNU4-18P-201ENST00000516751 149 ntBASIC5.66□□□□□ -1.5
CDH11P55287 AC008429.4-201ENST00000521201 182 ntBASIC5.66□□□□□ -1.5
CDH11P55287 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CDH11P55287 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.66□□□□□ -1.5
CDH11P55287 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC5.66□□□□□ -1.5
CDH11P55287 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC5.66□□□□□ -1.5
CDH11P55287 AC245128.3-201ENST00000594721 748 ntBASIC5.66□□□□□ -1.5
CDH11P55287 AP001267.4-201ENST00000602598 545 ntBASIC5.66□□□□□ -1.5
CDH11P55287 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC5.66□□□□□ -1.5
CDH11P55287 CXADRP3-202ENST00000617265 1100 ntBASIC5.66□□□□□ -1.5
CDH11P55287 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CDH11P55287 AL591926.1-201ENST00000620542 217 ntBASIC5.66□□□□□ -1.5
CDH11P55287 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC5.66□□□□□ -1.5
CDH11P55287 AC132825.8-201ENST00000640783 297 ntBASIC5.66□□□□□ -1.5
CDH11P55287 CASC19-274ENST00000642018 970 ntBASIC5.66□□□□□ -1.5
CDH11P55287 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CDH11P55287 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CDH11P55287 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CDH11P55287 HDAC1P2-201ENST00000453661 1398 ntBASIC5.66□□□□□ -1.5
CDH11P55287 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC5.65□□□□□ -1.5
CDH11P55287 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CDH11P55287 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.65□□□□□ -1.5
CDH11P55287 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CDH11P55287 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CDH11P55287 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CDH11P55287 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CDH11P55287 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CDH11P55287 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
CDH11P55287 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC5.65□□□□□ -1.5
CDH11P55287 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
CDH11P55287 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CDH11P55287 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CDH11P55287 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.65□□□□□ -1.5
CDH11P55287 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CDH11P55287 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.65□□□□□ -1.5
CDH11P55287 TINAG-202ENST00000370864 692 ntTSL 2 BASIC5.65□□□□□ -1.5
CDH11P55287 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CDH11P55287 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CDH11P55287 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CDH11P55287 RN7SKP281-201ENST00000410472 352 ntBASIC5.65□□□□□ -1.5
CDH11P55287 ZNF92P1Y-201ENST00000415010 1191 ntBASIC5.65□□□□□ -1.5
CDH11P55287 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
CDH11P55287 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.65□□□□□ -1.5
CDH11P55287 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CDH11P55287 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.65□□□□□ -1.5
CDH11P55287 AC021876.1-201ENST00000425959 359 ntBASIC5.65□□□□□ -1.5
CDH11P55287 COX4I1P2-201ENST00000447446 547 ntBASIC5.65□□□□□ -1.5
CDH11P55287 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.65□□□□□ -1.5
CDH11P55287 AC093166.3-201ENST00000448785 303 ntBASIC5.65□□□□□ -1.5
CDH11P55287 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.65□□□□□ -1.5
CDH11P55287 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.65□□□□□ -1.5
CDH11P55287 AC112187.1-201ENST00000455837 479 ntBASIC5.65□□□□□ -1.5
CDH11P55287 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.65□□□□□ -1.5
CDH11P55287 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.65□□□□□ -1.5
CDH11P55287 HMGN1P16-201ENST00000508308 283 ntBASIC5.65□□□□□ -1.5
CDH11P55287 ACTR6P1-201ENST00000514311 1104 ntBASIC5.65□□□□□ -1.5
CDH11P55287 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC5.65□□□□□ -1.5
CDH11P55287 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC5.65□□□□□ -1.5
CDH11P55287 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.65□□□□□ -1.5
CDH11P55287 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC5.65□□□□□ -1.5
CDH11P55287 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CDH11P55287 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.65□□□□□ -1.5
CDH11P55287 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC5.65□□□□□ -1.5
CDH11P55287 AC009729.1-201ENST00000548873 1133 ntBASIC5.65□□□□□ -1.5
CDH11P55287 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC5.65□□□□□ -1.5
CDH11P55287 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
CDH11P55287 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.65□□□□□ -1.5
CDH11P55287 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CDH11P55287 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CDH11P55287 AL589863.1-201ENST00000595383 631 ntBASIC5.65□□□□□ -1.5
CDH11P55287 AL583832.1-201ENST00000603227 784 ntBASIC5.65□□□□□ -1.5
CDH11P55287 AC006924.1-201ENST00000610750 559 ntBASIC5.65□□□□□ -1.5
CDH11P55287 AC073593.1-201ENST00000624500 411 ntBASIC5.65□□□□□ -1.5
CDH11P55287 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC5.65□□□□□ -1.5
CDH11P55287 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
CDH11P55287 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.65□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms