Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 IGHV7-34-1-201ENST00000519200 350 ntBASIC7.01□□□□□ -1.29
EPHB3P54753 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
EPHB3P54753 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC7.01□□□□□ -1.29
EPHB3P54753 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
EPHB3P54753 OR4A13P-201ENST00000529316 942 ntBASIC7.01□□□□□ -1.29
EPHB3P54753 RFPL1S-203ENST00000539579 330 ntBASIC7.01□□□□□ -1.29
EPHB3P54753 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC7.01□□□□□ -1.29
EPHB3P54753 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC7.01□□□□□ -1.29
EPHB3P54753 AC026956.1-201ENST00000558741 396 ntBASIC7.01□□□□□ -1.29
EPHB3P54753 MIR3154-201ENST00000577829 84 ntBASIC7.01□□□□□ -1.29
EPHB3P54753 AC103987.3-201ENST00000582071 292 ntBASIC7.01□□□□□ -1.29
EPHB3P54753 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC7.01□□□□□ -1.29
EPHB3P54753 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC7.01□□□□□ -1.29
EPHB3P54753 AC124856.1-201ENST00000600819 896 ntBASIC7.01□□□□□ -1.29
EPHB3P54753 SNX6P1-201ENST00000601728 1224 ntBASIC7.01□□□□□ -1.29
EPHB3P54753 AL022067.1-201ENST00000602426 454 ntBASIC7.01□□□□□ -1.29
EPHB3P54753 AP002360.4-201ENST00000606980 481 ntBASIC7.01□□□□□ -1.29
EPHB3P54753 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC7.01□□□□□ -1.29
EPHB3P54753 AC007786.3-201ENST00000615154 596 ntBASIC7.01□□□□□ -1.29
EPHB3P54753 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC7.01□□□□□ -1.29
EPHB3P54753 AL591926.1-201ENST00000620542 217 ntBASIC7.01□□□□□ -1.29
EPHB3P54753 AC026124.2-201ENST00000621847 656 ntBASIC7.01□□□□□ -1.29
EPHB3P54753 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC7.01□□□□□ -1.29
EPHB3P54753 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC7.01□□□□□ -1.29
EPHB3P54753 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
EPHB3P54753 AL449283.1-201ENST00000602631 3403 ntBASIC7.01□□□□□ -1.29
EPHB3P54753 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
EPHB3P54753 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
EPHB3P54753 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
EPHB3P54753 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
EPHB3P54753 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
EPHB3P54753 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
EPHB3P54753 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC7.01□□□□□ -1.29
EPHB3P54753 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC7.01□□□□□ -1.29
EPHB3P54753 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC7.01□□□□□ -1.29
EPHB3P54753 DDX6P1-205ENST00000441966 1436 ntBASIC7.01□□□□□ -1.29
EPHB3P54753 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC7.01□□□□□ -1.29
EPHB3P54753 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC7.01□□□□□ -1.29
EPHB3P54753 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
EPHB3P54753 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
EPHB3P54753 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
EPHB3P54753 RACGAP1P-201ENST00000550663 1879 ntBASIC7□□□□□ -1.29
EPHB3P54753 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
EPHB3P54753 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC7□□□□□ -1.29
EPHB3P54753 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC7□□□□□ -1.29
EPHB3P54753 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
EPHB3P54753 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
EPHB3P54753 AC096564.2-201ENST00000512428 3147 ntTSL 5 BASIC7□□□□□ -1.29
EPHB3P54753 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
EPHB3P54753 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
EPHB3P54753 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC7□□□□□ -1.29
EPHB3P54753 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC7□□□□□ -1.29
EPHB3P54753 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC7□□□□□ -1.29
EPHB3P54753 AC017079.1-201ENST00000333650 415 ntBASIC7□□□□□ -1.29
EPHB3P54753 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC7□□□□□ -1.29
EPHB3P54753 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC7□□□□□ -1.29
EPHB3P54753 RNU6-386P-201ENST00000362650 107 ntBASIC7□□□□□ -1.29
EPHB3P54753 MIR1204-201ENST00000408388 67 ntBASIC7□□□□□ -1.29
EPHB3P54753 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC7□□□□□ -1.29
EPHB3P54753 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC7□□□□□ -1.29
EPHB3P54753 RMRPP5-201ENST00000411156 267 ntBASIC7□□□□□ -1.29
EPHB3P54753 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC7□□□□□ -1.29
EPHB3P54753 MRPS21P5-201ENST00000417885 231 ntBASIC7□□□□□ -1.29
EPHB3P54753 AC241520.1-201ENST00000422654 1099 ntBASIC7□□□□□ -1.29
EPHB3P54753 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC7□□□□□ -1.29
EPHB3P54753 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
EPHB3P54753 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC7□□□□□ -1.29
EPHB3P54753 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC7□□□□□ -1.29
EPHB3P54753 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC7□□□□□ -1.29
EPHB3P54753 AL138878.2-201ENST00000440581 1241 ntBASIC7□□□□□ -1.29
EPHB3P54753 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC7□□□□□ -1.29
EPHB3P54753 AC004022.1-201ENST00000447766 1066 ntBASIC7□□□□□ -1.29
EPHB3P54753 AL157884.3-201ENST00000448273 1184 ntBASIC7□□□□□ -1.29
EPHB3P54753 CCNJP1-201ENST00000450600 1149 ntBASIC7□□□□□ -1.29
EPHB3P54753 RPL32P14-201ENST00000463196 378 ntBASIC7□□□□□ -1.29
EPHB3P54753 AC005017.1-201ENST00000482002 490 ntBASIC7□□□□□ -1.29
EPHB3P54753 RPL24-206ENST00000495401 478 ntTSL 2 BASIC7□□□□□ -1.29
EPHB3P54753 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC7□□□□□ -1.29
EPHB3P54753 AC091860.1-201ENST00000505723 432 ntBASIC7□□□□□ -1.29
EPHB3P54753 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC7□□□□□ -1.29
EPHB3P54753 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC7□□□□□ -1.29
EPHB3P54753 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC7□□□□□ -1.29
EPHB3P54753 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC7□□□□□ -1.29
EPHB3P54753 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC7□□□□□ -1.29
EPHB3P54753 OR9L1P-201ENST00000529493 933 ntBASIC7□□□□□ -1.29
EPHB3P54753 LRRC6P1-201ENST00000532188 885 ntBASIC7□□□□□ -1.29
EPHB3P54753 GCSHP4-201ENST00000538792 439 ntBASIC7□□□□□ -1.29
EPHB3P54753 OLR1-209ENST00000543993 822 ntTSL 2 BASIC7□□□□□ -1.29
EPHB3P54753 AC084824.1-201ENST00000550917 1005 ntBASIC7□□□□□ -1.29
EPHB3P54753 AC107304.1-201ENST00000604229 296 ntBASIC7□□□□□ -1.29
EPHB3P54753 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC7□□□□□ -1.29
EPHB3P54753 AC021851.1-201ENST00000608537 1082 ntBASIC7□□□□□ -1.29
EPHB3P54753 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC7□□□□□ -1.29
EPHB3P54753 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
EPHB3P54753 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
EPHB3P54753 AC010333.3-201ENST00000615100 402 ntBASIC7□□□□□ -1.29
EPHB3P54753 AC096708.4-201ENST00000620563 552 ntBASIC7□□□□□ -1.29
EPHB3P54753 AP002782.1-201ENST00000623107 614 ntBASIC7□□□□□ -1.29
EPHB3P54753 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC7□□□□□ -1.29
EPHB3P54753 AC010325.3-201ENST00000641084 394 ntBASIC7□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms