Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC7.33□□□□□ -1.24
PMS1P54277 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
PMS1P54277 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
PMS1P54277 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
PMS1P54277 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
PMS1P54277 RN7SKP130-201ENST00000364924 301 ntBASIC7.33□□□□□ -1.24
PMS1P54277 RNA5SP152-201ENST00000365184 110 ntBASIC7.33□□□□□ -1.24
PMS1P54277 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC7.33□□□□□ -1.24
PMS1P54277 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC7.33□□□□□ -1.24
PMS1P54277 RPS7P12-201ENST00000422385 582 ntBASIC7.33□□□□□ -1.24
PMS1P54277 CHCHD4P5-201ENST00000436684 427 ntBASIC7.33□□□□□ -1.24
PMS1P54277 AL592114.2-201ENST00000440142 532 ntBASIC7.33□□□□□ -1.24
PMS1P54277 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC7.33□□□□□ -1.24
PMS1P54277 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC7.33□□□□□ -1.24
PMS1P54277 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC7.33□□□□□ -1.24
PMS1P54277 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC7.33□□□□□ -1.24
PMS1P54277 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC7.33□□□□□ -1.24
PMS1P54277 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC7.33□□□□□ -1.24
PMS1P54277 RPL26P30-201ENST00000453533 435 ntBASIC7.33□□□□□ -1.24
PMS1P54277 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC7.33□□□□□ -1.24
PMS1P54277 RN7SL492P-201ENST00000460700 295 ntBASIC7.33□□□□□ -1.24
PMS1P54277 BET1P1-201ENST00000482276 359 ntBASIC7.33□□□□□ -1.24
PMS1P54277 RN7SL868P-201ENST00000485915 303 ntBASIC7.33□□□□□ -1.24
PMS1P54277 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC7.33□□□□□ -1.24
PMS1P54277 SCG5-207ENST00000497208 949 ntTSL 5 BASIC7.33□□□□□ -1.24
PMS1P54277 CETN3-206ENST00000522864 738 ntTSL 3 BASIC7.33□□□□□ -1.24
PMS1P54277 OR52K3P-201ENST00000531655 943 ntBASIC7.33□□□□□ -1.24
PMS1P54277 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC7.33□□□□□ -1.24
PMS1P54277 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC7.33□□□□□ -1.24
PMS1P54277 AL445383.1-201ENST00000554689 874 ntBASIC7.33□□□□□ -1.24
PMS1P54277 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC7.33□□□□□ -1.24
PMS1P54277 ZNF971P-201ENST00000562068 1249 ntBASIC7.33□□□□□ -1.24
PMS1P54277 AC009094.1-201ENST00000564443 426 ntBASIC7.33□□□□□ -1.24
PMS1P54277 AC091304.4-201ENST00000565703 620 ntBASIC7.33□□□□□ -1.24
PMS1P54277 RN7SL689P-201ENST00000577215 297 ntBASIC7.33□□□□□ -1.24
PMS1P54277 AC006120.1-201ENST00000579375 546 ntBASIC7.33□□□□□ -1.24
PMS1P54277 AP005136.2-201ENST00000583253 1049 ntBASIC7.33□□□□□ -1.24
PMS1P54277 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC7.33□□□□□ -1.24
PMS1P54277 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC7.33□□□□□ -1.24
PMS1P54277 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC7.33□□□□□ -1.24
PMS1P54277 AC245100.7-201ENST00000609678 442 ntBASIC7.33□□□□□ -1.24
PMS1P54277 AC103564.3-201ENST00000621194 220 ntBASIC7.33□□□□□ -1.24
PMS1P54277 AP002782.1-201ENST00000623107 614 ntBASIC7.33□□□□□ -1.24
PMS1P54277 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
PMS1P54277 AP003108.4-201ENST00000623917 878 ntBASIC7.33□□□□□ -1.24
PMS1P54277 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC7.33□□□□□ -1.24
PMS1P54277 AC006453.3-201ENST00000635891 377 ntBASIC7.33□□□□□ -1.24
PMS1P54277 AC140479.4-205ENST00000636339 820 ntBASIC7.33□□□□□ -1.24
PMS1P54277 CASC19-274ENST00000642018 970 ntBASIC7.33□□□□□ -1.24
PMS1P54277 AL021877.2-201ENST00000624442 10684 ntBASIC7.33□□□□□ -1.24
PMS1P54277 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
PMS1P54277 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PMS1P54277 AP004289.1-201ENST00000436307 2205 ntBASIC7.33□□□□□ -1.24
PMS1P54277 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC7.33□□□□□ -1.24
PMS1P54277 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
PMS1P54277 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC7.33□□□□□ -1.24
PMS1P54277 AL359195.2-201ENST00000623657 4412 ntBASIC7.33□□□□□ -1.24
PMS1P54277 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC7.33□□□□□ -1.24
PMS1P54277 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PMS1P54277 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
PMS1P54277 AC126474.2-201ENST00000623268 1750 ntBASIC7.33□□□□□ -1.24
PMS1P54277 AC095038.1-201ENST00000429248 1591 ntBASIC7.33□□□□□ -1.24
PMS1P54277 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
PMS1P54277 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
PMS1P54277 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
PMS1P54277 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC7.33□□□□□ -1.24
PMS1P54277 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC7.32□□□□□ -1.24
PMS1P54277 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
PMS1P54277 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
PMS1P54277 CASC19-228ENST00000641414 1684 ntBASIC7.32□□□□□ -1.24
PMS1P54277 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
PMS1P54277 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC7.32□□□□□ -1.24
PMS1P54277 AC022034.1-201ENST00000512867 2156 ntBASIC7.32□□□□□ -1.24
PMS1P54277 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
PMS1P54277 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
PMS1P54277 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC7.32□□□□□ -1.24
PMS1P54277 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
PMS1P54277 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
PMS1P54277 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
PMS1P54277 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
PMS1P54277 Y_RNA.169-201ENST00000363745 96 ntBASIC7.32□□□□□ -1.24
PMS1P54277 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
PMS1P54277 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
PMS1P54277 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC7.32□□□□□ -1.24
PMS1P54277 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
PMS1P54277 AL451061.1-201ENST00000407887 862 ntBASIC7.32□□□□□ -1.24
PMS1P54277 RN7SKP117-201ENST00000410175 264 ntBASIC7.32□□□□□ -1.24
PMS1P54277 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC7.32□□□□□ -1.24
PMS1P54277 AC008173.1-201ENST00000418901 264 ntBASIC7.32□□□□□ -1.24
PMS1P54277 RPL36P18-201ENST00000419316 318 ntBASIC7.32□□□□□ -1.24
PMS1P54277 AC016907.1-201ENST00000419483 435 ntBASIC7.32□□□□□ -1.24
PMS1P54277 AL139415.1-201ENST00000424862 352 ntBASIC7.32□□□□□ -1.24
PMS1P54277 AC009303.1-201ENST00000426307 352 ntBASIC7.32□□□□□ -1.24
PMS1P54277 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
PMS1P54277 AL138479.1-201ENST00000426913 484 ntBASIC7.32□□□□□ -1.24
PMS1P54277 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC7.32□□□□□ -1.24
PMS1P54277 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC7.32□□□□□ -1.24
PMS1P54277 PTGES3P5-201ENST00000455109 434 ntBASIC7.32□□□□□ -1.24
PMS1P54277 AC063955.1-201ENST00000462872 685 ntBASIC7.32□□□□□ -1.24
PMS1P54277 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC7.32□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms