Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.75□□□□□ -1.33
GPC3P51654 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.75□□□□□ -1.33
GPC3P51654 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.75□□□□□ -1.33
GPC3P51654 AL137067.2-201ENST00000621202 131 ntBASIC6.75□□□□□ -1.33
GPC3P51654 AL136228.1-201ENST00000622221 319 ntBASIC6.75□□□□□ -1.33
GPC3P51654 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC6.75□□□□□ -1.33
GPC3P51654 AC096921.2-201ENST00000561507 1916 ntBASIC6.75□□□□□ -1.33
GPC3P51654 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.75□□□□□ -1.33
GPC3P51654 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.75□□□□□ -1.33
GPC3P51654 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
GPC3P51654 BX284613.1-201ENST00000452221 1641 ntBASIC6.75□□□□□ -1.33
GPC3P51654 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
GPC3P51654 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
GPC3P51654 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
GPC3P51654 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.75□□□□□ -1.33
GPC3P51654 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
GPC3P51654 AL355377.1-201ENST00000621125 1653 ntBASIC6.74□□□□□ -1.33
GPC3P51654 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.74□□□□□ -1.33
GPC3P51654 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
GPC3P51654 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
GPC3P51654 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
GPC3P51654 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.74□□□□□ -1.33
GPC3P51654 HDAC1P2-201ENST00000453661 1398 ntBASIC6.74□□□□□ -1.33
GPC3P51654 AC034229.2-201ENST00000566945 2508 ntBASIC6.74□□□□□ -1.33
GPC3P51654 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
GPC3P51654 RNA5SP514-201ENST00000363717 111 ntBASIC6.74□□□□□ -1.33
GPC3P51654 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
GPC3P51654 AC007562.1-201ENST00000421819 517 ntBASIC6.74□□□□□ -1.33
GPC3P51654 NAP1L4P2-201ENST00000425958 899 ntBASIC6.74□□□□□ -1.33
GPC3P51654 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC6.74□□□□□ -1.33
GPC3P51654 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC6.74□□□□□ -1.33
GPC3P51654 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.74□□□□□ -1.33
GPC3P51654 AL512593.1-201ENST00000444758 779 ntBASIC6.74□□□□□ -1.33
GPC3P51654 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC6.74□□□□□ -1.33
GPC3P51654 AC023274.2-201ENST00000445264 521 ntBASIC6.74□□□□□ -1.33
GPC3P51654 AL022319.1-201ENST00000458183 1167 ntBASIC6.74□□□□□ -1.33
GPC3P51654 AC128716.1-201ENST00000475129 166 ntBASIC6.74□□□□□ -1.33
GPC3P51654 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
GPC3P51654 Y_RNA.667-201ENST00000516212 107 ntBASIC6.74□□□□□ -1.33
GPC3P51654 RNA5SP438-201ENST00000516561 112 ntBASIC6.74□□□□□ -1.33
GPC3P51654 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC6.74□□□□□ -1.33
GPC3P51654 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC6.74□□□□□ -1.33
GPC3P51654 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
GPC3P51654 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.74□□□□□ -1.33
GPC3P51654 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.74□□□□□ -1.33
GPC3P51654 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC6.74□□□□□ -1.33
GPC3P51654 AC027243.2-201ENST00000602530 724 ntBASIC6.74□□□□□ -1.33
GPC3P51654 AL645933.2-201ENST00000606743 1207 ntBASIC6.74□□□□□ -1.33
GPC3P51654 AC141002.1-201ENST00000607025 279 ntBASIC6.74□□□□□ -1.33
GPC3P51654 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.74□□□□□ -1.33
GPC3P51654 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.74□□□□□ -1.33
GPC3P51654 AC096708.4-201ENST00000620563 552 ntBASIC6.74□□□□□ -1.33
GPC3P51654 AC010809.3-201ENST00000621310 641 ntBASIC6.74□□□□□ -1.33
GPC3P51654 AL355480.1-201ENST00000629041 99 ntBASIC6.74□□□□□ -1.33
GPC3P51654 AC132825.8-201ENST00000640783 297 ntBASIC6.74□□□□□ -1.33
GPC3P51654 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.74□□□□□ -1.33
GPC3P51654 AC119674.1-202ENST00000641333 1860 ntBASIC6.74□□□□□ -1.33
GPC3P51654 SHQ1P1-201ENST00000437111 1544 ntBASIC6.74□□□□□ -1.33
GPC3P51654 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
GPC3P51654 AL137058.3-201ENST00000624531 3099 ntBASIC6.74□□□□□ -1.33
GPC3P51654 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
GPC3P51654 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
GPC3P51654 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
GPC3P51654 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
GPC3P51654 AC130360.2-201ENST00000533477 1556 ntBASIC6.74□□□□□ -1.33
GPC3P51654 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.73□□□□□ -1.33
GPC3P51654 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
GPC3P51654 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
GPC3P51654 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
GPC3P51654 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
GPC3P51654 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
GPC3P51654 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
GPC3P51654 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
GPC3P51654 AC023490.2-201ENST00000359859 470 ntBASIC6.73□□□□□ -1.33
GPC3P51654 AL096829.1-201ENST00000413677 457 ntBASIC6.73□□□□□ -1.33
GPC3P51654 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC6.73□□□□□ -1.33
GPC3P51654 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.73□□□□□ -1.33
GPC3P51654 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC6.73□□□□□ -1.33
GPC3P51654 RPS17P17-201ENST00000419392 409 ntBASIC6.73□□□□□ -1.33
GPC3P51654 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC6.73□□□□□ -1.33
GPC3P51654 AC013410.1-201ENST00000436223 1232 ntBASIC6.73□□□□□ -1.33
GPC3P51654 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.73□□□□□ -1.33
GPC3P51654 RN7SL193P-201ENST00000491708 276 ntBASIC6.73□□□□□ -1.33
GPC3P51654 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.73□□□□□ -1.33
GPC3P51654 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6.73□□□□□ -1.33
GPC3P51654 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC6.73□□□□□ -1.33
GPC3P51654 CETN3-206ENST00000522864 738 ntTSL 3 BASIC6.73□□□□□ -1.33
GPC3P51654 OR6M2P-201ENST00000529831 871 ntBASIC6.73□□□□□ -1.33
GPC3P51654 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.73□□□□□ -1.33
GPC3P51654 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC6.73□□□□□ -1.33
GPC3P51654 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.73□□□□□ -1.33
GPC3P51654 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC6.73□□□□□ -1.33
GPC3P51654 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC6.73□□□□□ -1.33
GPC3P51654 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.73□□□□□ -1.33
GPC3P51654 AC100767.2-201ENST00000604840 693 ntBASIC6.73□□□□□ -1.33
GPC3P51654 MIR6809-201ENST00000612189 116 ntBASIC6.73□□□□□ -1.33
GPC3P51654 AL157762.1-201ENST00000619612 415 ntBASIC6.73□□□□□ -1.33
GPC3P51654 AC003992.1-201ENST00000635364 557 ntBASIC6.73□□□□□ -1.33
GPC3P51654 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.73□□□□□ -1.33
GPC3P51654 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms