Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC7.04□□□□□ -1.28
TM4SF4P48230 NEK2P4-201ENST00000425793 1329 ntBASIC7.04□□□□□ -1.28
TM4SF4P48230 AL512310.3-201ENST00000547023 1335 ntBASIC7.04□□□□□ -1.28
TM4SF4P48230 PRICKLE2-201ENST00000295902 7918 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
TM4SF4P48230 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
TM4SF4P48230 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
TM4SF4P48230 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC7.04□□□□□ -1.28
TM4SF4P48230 SPA17-204ENST00000532692 4949 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
TM4SF4P48230 ING3-204ENST00000431467 1447 ntTSL 2 BASIC7.04□□□□□ -1.28
TM4SF4P48230 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
TM4SF4P48230 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
TM4SF4P48230 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC7.04□□□□□ -1.28
TM4SF4P48230 AC016739.1-201ENST00000405359 345 ntBASIC7.04□□□□□ -1.28
TM4SF4P48230 RNU2-72P-201ENST00000411175 163 ntBASIC7.04□□□□□ -1.28
TM4SF4P48230 XIST-201ENST00000416330 750 ntTSL 2 BASIC7.04□□□□□ -1.28
TM4SF4P48230 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC7.04□□□□□ -1.28
TM4SF4P48230 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC7.04□□□□□ -1.28
TM4SF4P48230 RN7SL57P-201ENST00000493687 290 ntBASIC7.04□□□□□ -1.28
TM4SF4P48230 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC7.04□□□□□ -1.28
TM4SF4P48230 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC7.04□□□□□ -1.28
TM4SF4P48230 RNU6-760P-201ENST00000516078 97 ntBASIC7.04□□□□□ -1.28
TM4SF4P48230 SNORA43.3-201ENST00000517240 103 ntBASIC7.04□□□□□ -1.28
TM4SF4P48230 OR4V1P-201ENST00000525394 1140 ntBASIC7.04□□□□□ -1.28
TM4SF4P48230 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC7.04□□□□□ -1.28
TM4SF4P48230 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC7.04□□□□□ -1.28
TM4SF4P48230 AC027281.1-201ENST00000574178 758 ntBASIC7.04□□□□□ -1.28
TM4SF4P48230 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC7.04□□□□□ -1.28
TM4SF4P48230 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC7.04□□□□□ -1.28
TM4SF4P48230 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
TM4SF4P48230 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
TM4SF4P48230 ASAH1-203ENST00000381733 2512 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
TM4SF4P48230 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC7.04□□□□□ -1.28
TM4SF4P48230 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
TM4SF4P48230 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
TM4SF4P48230 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
TM4SF4P48230 SLC7A2-203ENST00000470360 7638 ntAPPRIS P3 TSL 5 BASIC7.04□□□□□ -1.28
TM4SF4P48230 AC087565.3-202ENST00000642085 1603 ntBASIC7.04□□□□□ -1.28
TM4SF4P48230 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC7.04□□□□□ -1.28
TM4SF4P48230 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC7.04□□□□□ -1.28
TM4SF4P48230 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
TM4SF4P48230 PABPC1P6-201ENST00000445594 1829 ntBASIC7.04□□□□□ -1.28
TM4SF4P48230 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC7.04□□□□□ -1.28
TM4SF4P48230 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC7.03□□□□□ -1.28
TM4SF4P48230 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
TM4SF4P48230 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC7.03□□□□□ -1.28
TM4SF4P48230 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC7.03□□□□□ -1.28
TM4SF4P48230 FANCL-201ENST00000233741 1683 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
TM4SF4P48230 RUNX1T1-201ENST00000265814 7284 ntAPPRIS P3 TSL 5 BASIC7.03□□□□□ -1.28
TM4SF4P48230 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC7.03□□□□□ -1.28
TM4SF4P48230 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
TM4SF4P48230 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC7.03□□□□□ -1.28
TM4SF4P48230 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
TM4SF4P48230 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC7.03□□□□□ -1.28
TM4SF4P48230 TMBIM6-209ENST00000547798 2494 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
TM4SF4P48230 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC7.03□□□□□ -1.28
TM4SF4P48230 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC7.03□□□□□ -1.28
TM4SF4P48230 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
TM4SF4P48230 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
TM4SF4P48230 LGSN-202ENST00000370658 5213 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
TM4SF4P48230 AC103591.2-201ENST00000265259 766 ntBASIC7.03□□□□□ -1.28
TM4SF4P48230 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
TM4SF4P48230 OR1F12-201ENST00000402365 945 ntBASIC7.03□□□□□ -1.28
TM4SF4P48230 RN7SKP59-201ENST00000410520 314 ntBASIC7.03□□□□□ -1.28
TM4SF4P48230 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC7.03□□□□□ -1.28
TM4SF4P48230 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC7.03□□□□□ -1.28
TM4SF4P48230 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC7.03□□□□□ -1.28
TM4SF4P48230 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC7.03□□□□□ -1.28
TM4SF4P48230 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
TM4SF4P48230 AL139415.1-201ENST00000424862 352 ntBASIC7.03□□□□□ -1.28
TM4SF4P48230 AC126120.1-201ENST00000431082 470 ntBASIC7.03□□□□□ -1.28
TM4SF4P48230 AL606490.8-201ENST00000441624 319 ntBASIC7.03□□□□□ -1.28
TM4SF4P48230 HGF-207ENST00000453018 721 ntTSL 3 BASIC7.03□□□□□ -1.28
TM4SF4P48230 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC7.03□□□□□ -1.28
TM4SF4P48230 UBA52P7-201ENST00000486088 380 ntBASIC7.03□□□□□ -1.28
TM4SF4P48230 AC114728.1-201ENST00000488289 483 ntBASIC7.03□□□□□ -1.28
TM4SF4P48230 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
TM4SF4P48230 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC7.03□□□□□ -1.28
TM4SF4P48230 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC7.03□□□□□ -1.28
TM4SF4P48230 NPM1P21-201ENST00000513394 762 ntBASIC7.03□□□□□ -1.28
TM4SF4P48230 SEC11B-201ENST00000518383 499 ntBASIC7.03□□□□□ -1.28
TM4SF4P48230 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC7.03□□□□□ -1.28
TM4SF4P48230 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC7.03□□□□□ -1.28
TM4SF4P48230 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
TM4SF4P48230 AC009120.3-201ENST00000563335 499 ntBASIC7.03□□□□□ -1.28
TM4SF4P48230 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC7.03□□□□□ -1.28
TM4SF4P48230 AC073575.2-201ENST00000614212 627 ntBASIC7.03□□□□□ -1.28
TM4SF4P48230 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC7.03□□□□□ -1.28
TM4SF4P48230 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
TM4SF4P48230 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC7.03□□□□□ -1.28
TM4SF4P48230 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
TM4SF4P48230 PHIP-201ENST00000275034 10460 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
TM4SF4P48230 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
TM4SF4P48230 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
TM4SF4P48230 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC7.03□□□□□ -1.28
TM4SF4P48230 TTLL5-207ENST00000554510 2624 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
TM4SF4P48230 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
TM4SF4P48230 ICE2P1-201ENST00000512800 1849 ntBASIC7.03□□□□□ -1.28
TM4SF4P48230 SVEP1-202ENST00000374469 12194 ntAPPRIS P2 TSL 5 BASIC7.03□□□□□ -1.28
TM4SF4P48230 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
TM4SF4P48230 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms