Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 AC012676.3-201ENST00000614983 479 ntBASIC6.06□□□□□ -1.44
HNF4AP41235 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC6.06□□□□□ -1.44
HNF4AP41235 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC6.06□□□□□ -1.44
HNF4AP41235 OR7E91P-202ENST00000642062 1198 ntBASIC6.06□□□□□ -1.44
HNF4AP41235 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
HNF4AP41235 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
HNF4AP41235 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
HNF4AP41235 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HNF4AP41235 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HNF4AP41235 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HNF4AP41235 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HNF4AP41235 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.05□□□□□ -1.44
HNF4AP41235 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HNF4AP41235 AP005432.1-201ENST00000580891 3485 ntBASIC6.05□□□□□ -1.44
HNF4AP41235 AC011416.1-201ENST00000514947 1732 ntBASIC6.05□□□□□ -1.44
HNF4AP41235 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
HNF4AP41235 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HNF4AP41235 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.05□□□□□ -1.44
HNF4AP41235 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HNF4AP41235 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.05□□□□□ -1.44
HNF4AP41235 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HNF4AP41235 METTL5-202ENST00000308099 629 ntTSL 3 BASIC6.05□□□□□ -1.44
HNF4AP41235 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
HNF4AP41235 MIR137-201ENST00000385223 102 ntBASIC6.05□□□□□ -1.44
HNF4AP41235 AL445238.1-204ENST00000400311 463 ntBASIC6.05□□□□□ -1.44
HNF4AP41235 CYP2AC1P-201ENST00000407830 1173 ntBASIC6.05□□□□□ -1.44
HNF4AP41235 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC6.05□□□□□ -1.44
HNF4AP41235 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.05□□□□□ -1.44
HNF4AP41235 AC007562.1-201ENST00000421819 517 ntBASIC6.05□□□□□ -1.44
HNF4AP41235 OR5W1P-201ENST00000423705 938 ntBASIC6.05□□□□□ -1.44
HNF4AP41235 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.05□□□□□ -1.44
HNF4AP41235 CXCR2P1-202ENST00000443392 1074 ntBASIC6.05□□□□□ -1.44
HNF4AP41235 AC023274.2-201ENST00000445264 521 ntBASIC6.05□□□□□ -1.44
HNF4AP41235 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC6.05□□□□□ -1.44
HNF4AP41235 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.05□□□□□ -1.44
HNF4AP41235 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC6.05□□□□□ -1.44
HNF4AP41235 SEPT7P3-201ENST00000455017 621 ntBASIC6.05□□□□□ -1.44
HNF4AP41235 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.05□□□□□ -1.44
HNF4AP41235 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.05□□□□□ -1.44
HNF4AP41235 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
HNF4AP41235 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC6.05□□□□□ -1.44
HNF4AP41235 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC6.05□□□□□ -1.44
HNF4AP41235 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.05□□□□□ -1.44
HNF4AP41235 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC6.05□□□□□ -1.44
HNF4AP41235 RNA5SP206-201ENST00000516703 121 ntBASIC6.05□□□□□ -1.44
HNF4AP41235 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC6.05□□□□□ -1.44
HNF4AP41235 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC6.05□□□□□ -1.44
HNF4AP41235 AC025857.1-201ENST00000525252 377 ntBASIC6.05□□□□□ -1.44
HNF4AP41235 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
HNF4AP41235 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.05□□□□□ -1.44
HNF4AP41235 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC6.05□□□□□ -1.44
HNF4AP41235 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.05□□□□□ -1.44
HNF4AP41235 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC6.05□□□□□ -1.44
HNF4AP41235 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC6.05□□□□□ -1.44
HNF4AP41235 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC6.05□□□□□ -1.44
HNF4AP41235 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.05□□□□□ -1.44
HNF4AP41235 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HNF4AP41235 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC6.05□□□□□ -1.44
HNF4AP41235 AC011270.1-201ENST00000558606 583 ntBASIC6.05□□□□□ -1.44
HNF4AP41235 NPIPB1P-202ENST00000588786 828 ntBASIC6.05□□□□□ -1.44
HNF4AP41235 DYNLL1P1-201ENST00000595442 269 ntBASIC6.05□□□□□ -1.44
HNF4AP41235 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.05□□□□□ -1.44
HNF4AP41235 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.05□□□□□ -1.44
HNF4AP41235 NF1P10-201ENST00000613227 742 ntBASIC6.05□□□□□ -1.44
HNF4AP41235 AL031658.2-201ENST00000616850 651 ntBASIC6.05□□□□□ -1.44
HNF4AP41235 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.05□□□□□ -1.44
HNF4AP41235 MIR6811-201ENST00000620409 58 ntBASIC6.05□□□□□ -1.44
HNF4AP41235 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC6.05□□□□□ -1.44
HNF4AP41235 AC003992.1-201ENST00000635364 557 ntBASIC6.05□□□□□ -1.44
HNF4AP41235 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.05□□□□□ -1.44
HNF4AP41235 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC6.05□□□□□ -1.44
HNF4AP41235 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HNF4AP41235 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
HNF4AP41235 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HNF4AP41235 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.05□□□□□ -1.44
HNF4AP41235 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
HNF4AP41235 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC6.05□□□□□ -1.44
HNF4AP41235 AC096921.2-201ENST00000561507 1916 ntBASIC6.05□□□□□ -1.44
HNF4AP41235 AP002512.4-202ENST00000641599 4530 ntBASIC6.05□□□□□ -1.44
HNF4AP41235 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.05□□□□□ -1.44
HNF4AP41235 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
HNF4AP41235 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.05□□□□□ -1.44
HNF4AP41235 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HNF4AP41235 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC6.05□□□□□ -1.44
HNF4AP41235 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HNF4AP41235 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HNF4AP41235 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
HNF4AP41235 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC6.04□□□□□ -1.44
HNF4AP41235 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.04□□□□□ -1.44
HNF4AP41235 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HNF4AP41235 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
HNF4AP41235 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.04□□□□□ -1.44
HNF4AP41235 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC6.04□□□□□ -1.44
HNF4AP41235 CASC19-246ENST00000641625 1606 ntBASIC6.04□□□□□ -1.44
HNF4AP41235 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.04□□□□□ -1.44
HNF4AP41235 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HNF4AP41235 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.04□□□□□ -1.44
HNF4AP41235 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC6.04□□□□□ -1.44
HNF4AP41235 TINAG-203ENST00000370869 782 ntTSL 3 BASIC6.04□□□□□ -1.44
HNF4AP41235 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms