Protein–RNA interactions for Protein: P38398

BRCA1, Breast cancer type 1 susceptibility protein, humanhuman

Known RBP Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1P38398 LDHBP2-201ENST00000456969 1005 ntBASIC7.11□□□□□ -1.27
BRCA1P38398 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC7.11□□□□□ -1.27
BRCA1P38398 NMNAT1P5-201ENST00000559657 841 ntBASIC7.11□□□□□ -1.27
BRCA1P38398 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC7.11□□□□□ -1.27
BRCA1P38398 AL022394.1-201ENST00000606979 292 ntBASIC7.11□□□□□ -1.27
BRCA1P38398 FAM25E-202ENST00000608562 189 ntBASIC7.11□□□□□ -1.27
BRCA1P38398 AP002799.1-201ENST00000623552 423 ntBASIC7.11□□□□□ -1.27
BRCA1P38398 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
BRCA1P38398 AC110597.1-201ENST00000562669 3176 ntBASIC7.11□□□□□ -1.27
BRCA1P38398 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
BRCA1P38398 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
BRCA1P38398 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC7.1□□□□□ -1.27
BRCA1P38398 ZNF555-201ENST00000334241 8557 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
BRCA1P38398 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
BRCA1P38398 MFN1-205ENST00000471841 5224 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
BRCA1P38398 SLC7A2-201ENST00000004531 7560 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
BRCA1P38398 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
BRCA1P38398 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
BRCA1P38398 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
BRCA1P38398 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
BRCA1P38398 NBPF12-202ENST00000579935 5035 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
BRCA1P38398 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC7.1□□□□□ -1.27
BRCA1P38398 RNA5SP335-201ENST00000363817 110 ntBASIC7.1□□□□□ -1.27
BRCA1P38398 SHPRH-203ENST00000367505 7201 ntAPPRIS P2 TSL 5 BASIC7.1□□□□□ -1.27
BRCA1P38398 MIR765-201ENST00000390226 114 ntBASIC7.1□□□□□ -1.27
BRCA1P38398 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC7.1□□□□□ -1.27
BRCA1P38398 AC021074.2-201ENST00000468434 172 ntBASIC7.1□□□□□ -1.27
BRCA1P38398 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC7.1□□□□□ -1.27
BRCA1P38398 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC7.1□□□□□ -1.27
BRCA1P38398 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC7.1□□□□□ -1.27
BRCA1P38398 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC7.1□□□□□ -1.27
BRCA1P38398 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC7.1□□□□□ -1.27
BRCA1P38398 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
BRCA1P38398 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
BRCA1P38398 AC013488.1-201ENST00000526618 1838 ntBASIC7.1□□□□□ -1.27
BRCA1P38398 AL136981.1-203ENST00000451452 3844 ntBASIC7.1□□□□□ -1.27
BRCA1P38398 FAM168A-201ENST00000064778 7296 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
BRCA1P38398 CTAGE11P-201ENST00000451540 2353 ntBASIC7.1□□□□□ -1.27
BRCA1P38398 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
BRCA1P38398 AP002991.2-201ENST00000623807 2801 ntBASIC7.1□□□□□ -1.27
BRCA1P38398 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
BRCA1P38398 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
BRCA1P38398 NYAP2-202ENST00000636099 5461 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
BRCA1P38398 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
BRCA1P38398 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
BRCA1P38398 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
BRCA1P38398 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
BRCA1P38398 KCNMB3P1-202ENST00000493696 3389 ntBASIC7.09□□□□□ -1.27
BRCA1P38398 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
BRCA1P38398 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC7.09□□□□□ -1.27
BRCA1P38398 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC7.09□□□□□ -1.27
BRCA1P38398 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC7.09□□□□□ -1.27
BRCA1P38398 RPS3AP41-201ENST00000462701 778 ntBASIC7.09□□□□□ -1.27
BRCA1P38398 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
BRCA1P38398 OR4A42P-201ENST00000531397 938 ntBASIC7.09□□□□□ -1.27
BRCA1P38398 AP004607.2-201ENST00000533949 322 ntBASIC7.09□□□□□ -1.27
BRCA1P38398 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC7.09□□□□□ -1.27
BRCA1P38398 GMDS-AS1-202ENST00000505870 8217 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
BRCA1P38398 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.27
BRCA1P38398 MAVS-201ENST00000416600 11596 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
BRCA1P38398 RAD18-201ENST00000264926 5886 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
BRCA1P38398 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC7.09□□□□□ -1.27
BRCA1P38398 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
BRCA1P38398 OR2A5-202ENST00000641693 8681 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
BRCA1P38398 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC7.09□□□□□ -1.27
BRCA1P38398 ERCC4-201ENST00000311895 6758 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
BRCA1P38398 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
BRCA1P38398 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
BRCA1P38398 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
BRCA1P38398 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
BRCA1P38398 AC105749.1-201ENST00000631338 2008 ntBASIC7.09□□□□□ -1.28
BRCA1P38398 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC7.09□□□□□ -1.28
BRCA1P38398 RNA5SP350-201ENST00000363298 111 ntBASIC7.09□□□□□ -1.28
BRCA1P38398 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC7.09□□□□□ -1.28
BRCA1P38398 EIF1P7-201ENST00000487533 337 ntBASIC7.09□□□□□ -1.28
BRCA1P38398 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC7.09□□□□□ -1.28
BRCA1P38398 AC063977.5-201ENST00000601044 974 ntBASIC7.09□□□□□ -1.28
BRCA1P38398 AC008115.3-201ENST00000614874 549 ntBASIC7.09□□□□□ -1.28
BRCA1P38398 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC7.09□□□□□ -1.28
BRCA1P38398 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.28
BRCA1P38398 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC7.09□□□□□ -1.28
BRCA1P38398 KCNMA1-273ENST00000639913 12071 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.28
BRCA1P38398 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
BRCA1P38398 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC7.08□□□□□ -1.28
BRCA1P38398 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
BRCA1P38398 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
BRCA1P38398 NSD2-208ENST00000420906 5109 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
BRCA1P38398 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
BRCA1P38398 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
BRCA1P38398 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
BRCA1P38398 CR1-206ENST00000400960 6959 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
BRCA1P38398 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
BRCA1P38398 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
BRCA1P38398 OR6D1P-201ENST00000436165 939 ntBASIC7.08□□□□□ -1.28
BRCA1P38398 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC7.08□□□□□ -1.28
BRCA1P38398 AC092106.1-201ENST00000444291 373 ntBASIC7.08□□□□□ -1.28
BRCA1P38398 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC7.08□□□□□ -1.28
BRCA1P38398 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC7.08□□□□□ -1.28
BRCA1P38398 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC7.08□□□□□ -1.28
BRCA1P38398 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC7.08□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms