Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CTNNA1P35221 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CTNNA1P35221 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CTNNA1P35221 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CTNNA1P35221 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CTNNA1P35221 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CTNNA1P35221 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CTNNA1P35221 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
CTNNA1P35221 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CTNNA1P35221 ARSFP1-201ENST00000398758 477 ntBASIC6.43□□□□□ -1.38
CTNNA1P35221 AL157702.1-201ENST00000398764 426 ntBASIC6.43□□□□□ -1.38
CTNNA1P35221 PTCD2P2-201ENST00000415579 1095 ntBASIC6.43□□□□□ -1.38
CTNNA1P35221 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC6.43□□□□□ -1.38
CTNNA1P35221 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.43□□□□□ -1.38
CTNNA1P35221 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.43□□□□□ -1.38
CTNNA1P35221 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC6.43□□□□□ -1.38
CTNNA1P35221 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.43□□□□□ -1.38
CTNNA1P35221 AC128677.1-201ENST00000436016 442 ntBASIC6.43□□□□□ -1.38
CTNNA1P35221 RPL5P10-201ENST00000445207 894 ntBASIC6.43□□□□□ -1.38
CTNNA1P35221 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC6.43□□□□□ -1.38
CTNNA1P35221 RPL23AP60-201ENST00000450011 454 ntBASIC6.43□□□□□ -1.38
CTNNA1P35221 AC239798.3-201ENST00000454459 408 ntBASIC6.43□□□□□ -1.38
CTNNA1P35221 AL133351.3-201ENST00000454998 193 ntBASIC6.43□□□□□ -1.38
CTNNA1P35221 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CTNNA1P35221 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CTNNA1P35221 AC093815.1-201ENST00000508637 280 ntBASIC6.43□□□□□ -1.38
CTNNA1P35221 OSTC-204ENST00000512478 663 ntTSL 5 BASIC6.43□□□□□ -1.38
CTNNA1P35221 SNORD116-30-201ENST00000516468 85 ntBASIC6.43□□□□□ -1.38
CTNNA1P35221 RNA5SP206-201ENST00000516703 121 ntBASIC6.43□□□□□ -1.38
CTNNA1P35221 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC6.43□□□□□ -1.38
CTNNA1P35221 BCAS2P1-201ENST00000528022 632 ntBASIC6.43□□□□□ -1.38
CTNNA1P35221 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.43□□□□□ -1.38
CTNNA1P35221 AC027796.1-201ENST00000575593 512 ntBASIC6.43□□□□□ -1.38
CTNNA1P35221 AC125494.2-201ENST00000602431 657 ntBASIC6.43□□□□□ -1.38
CTNNA1P35221 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.43□□□□□ -1.38
CTNNA1P35221 AC008555.7-201ENST00000605008 583 ntBASIC6.43□□□□□ -1.38
CTNNA1P35221 AC067838.1-201ENST00000606064 577 ntBASIC6.43□□□□□ -1.38
CTNNA1P35221 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC6.43□□□□□ -1.38
CTNNA1P35221 CLUHP10-201ENST00000631979 980 ntBASIC6.43□□□□□ -1.38
CTNNA1P35221 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
CTNNA1P35221 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CTNNA1P35221 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.43□□□□□ -1.38
CTNNA1P35221 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CTNNA1P35221 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
CTNNA1P35221 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.43□□□□□ -1.38
CTNNA1P35221 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CTNNA1P35221 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC6.43□□□□□ -1.38
CTNNA1P35221 MTCO1P22-201ENST00000604619 1360 ntBASIC6.43□□□□□ -1.38
CTNNA1P35221 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CTNNA1P35221 AC016583.1-201ENST00000624221 2431 ntBASIC6.42□□□□□ -1.38
CTNNA1P35221 AC024587.1-201ENST00000505925 2157 ntBASIC6.42□□□□□ -1.38
CTNNA1P35221 SYT14P1-202ENST00000600441 1448 ntBASIC6.42□□□□□ -1.38
CTNNA1P35221 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CTNNA1P35221 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CTNNA1P35221 AC011416.1-201ENST00000514947 1732 ntBASIC6.42□□□□□ -1.38
CTNNA1P35221 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CTNNA1P35221 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.42□□□□□ -1.38
CTNNA1P35221 AC123769.1-201ENST00000530992 3192 ntBASIC6.42□□□□□ -1.38
CTNNA1P35221 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.42□□□□□ -1.38
CTNNA1P35221 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
CTNNA1P35221 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
CTNNA1P35221 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CTNNA1P35221 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC6.42□□□□□ -1.38
CTNNA1P35221 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC6.42□□□□□ -1.38
CTNNA1P35221 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CTNNA1P35221 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
CTNNA1P35221 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.42□□□□□ -1.38
CTNNA1P35221 SNORA77.2-201ENST00000408571 112 ntBASIC6.42□□□□□ -1.38
CTNNA1P35221 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC6.42□□□□□ -1.38
CTNNA1P35221 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CTNNA1P35221 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.42□□□□□ -1.38
CTNNA1P35221 AL512593.1-201ENST00000444758 779 ntBASIC6.42□□□□□ -1.38
CTNNA1P35221 POU5F1P5-201ENST00000445059 658 ntBASIC6.42□□□□□ -1.38
CTNNA1P35221 AL162739.1-201ENST00000450606 307 ntBASIC6.42□□□□□ -1.38
CTNNA1P35221 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC6.42□□□□□ -1.38
CTNNA1P35221 AL034369.1-201ENST00000453808 477 ntBASIC6.42□□□□□ -1.38
CTNNA1P35221 RN7SL352P-201ENST00000466002 277 ntBASIC6.42□□□□□ -1.38
CTNNA1P35221 AC098583.1-201ENST00000480875 255 ntBASIC6.42□□□□□ -1.38
CTNNA1P35221 PFN2-209ENST00000481275 560 ntTSL 4 BASIC6.42□□□□□ -1.38
CTNNA1P35221 DUBR-205ENST00000495228 411 ntTSL 2 BASIC6.42□□□□□ -1.38
CTNNA1P35221 AP000926.3-201ENST00000497201 299 ntBASIC6.42□□□□□ -1.38
CTNNA1P35221 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC6.42□□□□□ -1.38
CTNNA1P35221 Y_RNA.710-201ENST00000516975 110 ntBASIC6.42□□□□□ -1.38
CTNNA1P35221 TPM3P3-201ENST00000521343 354 ntBASIC6.42□□□□□ -1.38
CTNNA1P35221 CYCSP25-201ENST00000525280 316 ntBASIC6.42□□□□□ -1.38
CTNNA1P35221 AC023310.2-201ENST00000553844 547 ntBASIC6.42□□□□□ -1.38
CTNNA1P35221 LINC02259-202ENST00000565543 438 ntTSL 2 BASIC6.42□□□□□ -1.38
CTNNA1P35221 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.42□□□□□ -1.38
CTNNA1P35221 AC090774.2-201ENST00000584708 322 ntBASIC6.42□□□□□ -1.38
CTNNA1P35221 AP001357.1-201ENST00000586304 1053 ntBASIC6.42□□□□□ -1.38
CTNNA1P35221 AL589765.6-201ENST00000601909 549 ntBASIC6.42□□□□□ -1.38
CTNNA1P35221 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC6.42□□□□□ -1.38
CTNNA1P35221 IGKV2OR2-7-201ENST00000604652 304 ntBASIC6.42□□□□□ -1.38
CTNNA1P35221 AC141002.1-201ENST00000607025 279 ntBASIC6.42□□□□□ -1.38
CTNNA1P35221 RN7SL261P-201ENST00000613441 282 ntBASIC6.42□□□□□ -1.38
CTNNA1P35221 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.42□□□□□ -1.38
CTNNA1P35221 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.42□□□□□ -1.38
CTNNA1P35221 AC073869.7-201ENST00000640874 297 ntBASIC6.42□□□□□ -1.38
CTNNA1P35221 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
CTNNA1P35221 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms