Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CKS2P33552 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CKS2P33552 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CKS2P33552 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC4.3□□□□□ -1.72
CKS2P33552 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.3□□□□□ -1.72
CKS2P33552 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CKS2P33552 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CKS2P33552 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CKS2P33552 AC125336.1-201ENST00000508893 2827 ntBASIC4.3□□□□□ -1.72
CKS2P33552 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC4.3□□□□□ -1.72
CKS2P33552 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.3□□□□□ -1.72
CKS2P33552 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CKS2P33552 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CKS2P33552 AC007938.2-201ENST00000604666 2634 ntBASIC4.29□□□□□ -1.72
CKS2P33552 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CKS2P33552 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CKS2P33552 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.29□□□□□ -1.72
CKS2P33552 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CKS2P33552 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CKS2P33552 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.29□□□□□ -1.72
CKS2P33552 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CKS2P33552 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CKS2P33552 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC4.29□□□□□ -1.72
CKS2P33552 RN7SKP191-201ENST00000364713 306 ntBASIC4.29□□□□□ -1.72
CKS2P33552 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CKS2P33552 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CKS2P33552 EEF1GP6-201ENST00000402309 905 ntBASIC4.29□□□□□ -1.72
CKS2P33552 GPS2P1-201ENST00000411761 986 ntBASIC4.29□□□□□ -1.72
CKS2P33552 OR10T1P-201ENST00000424327 947 ntBASIC4.29□□□□□ -1.72
CKS2P33552 VN1R21P-201ENST00000426703 765 ntBASIC4.29□□□□□ -1.72
CKS2P33552 SUMO2P8-201ENST00000434672 286 ntBASIC4.29□□□□□ -1.72
CKS2P33552 AL359265.1-201ENST00000440296 795 ntBASIC4.29□□□□□ -1.72
CKS2P33552 AL663074.2-201ENST00000440621 479 ntBASIC4.29□□□□□ -1.72
CKS2P33552 COL11A2P1-205ENST00000441798 676 ntBASIC4.29□□□□□ -1.72
CKS2P33552 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC4.29□□□□□ -1.72
CKS2P33552 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CKS2P33552 RPS23P9-201ENST00000448848 438 ntBASIC4.29□□□□□ -1.72
CKS2P33552 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC4.29□□□□□ -1.72
CKS2P33552 MEMO1P4-201ENST00000453590 386 ntBASIC4.29□□□□□ -1.72
CKS2P33552 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC4.29□□□□□ -1.72
CKS2P33552 CBX5P1-201ENST00000468470 561 ntBASIC4.29□□□□□ -1.72
CKS2P33552 OR4D12P-201ENST00000509361 911 ntBASIC4.29□□□□□ -1.72
CKS2P33552 KHDC1P1-201ENST00000511053 508 ntBASIC4.29□□□□□ -1.72
CKS2P33552 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.29□□□□□ -1.72
CKS2P33552 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC4.29□□□□□ -1.72
CKS2P33552 AC022679.2-201ENST00000522186 813 ntTSL 2 BASIC4.29□□□□□ -1.72
CKS2P33552 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC4.29□□□□□ -1.72
CKS2P33552 AC138832.1-201ENST00000522871 556 ntBASIC4.29□□□□□ -1.72
CKS2P33552 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC4.29□□□□□ -1.72
CKS2P33552 OR4A42P-201ENST00000531397 938 ntBASIC4.29□□□□□ -1.72
CKS2P33552 AC044839.3-201ENST00000532068 860 ntTSL 3 BASIC4.29□□□□□ -1.72
CKS2P33552 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC4.29□□□□□ -1.72
CKS2P33552 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC4.29□□□□□ -1.72
CKS2P33552 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC4.29□□□□□ -1.72
CKS2P33552 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CKS2P33552 AC010287.1-201ENST00000566916 357 ntBASIC4.29□□□□□ -1.72
CKS2P33552 AC009852.2-201ENST00000567898 485 ntBASIC4.29□□□□□ -1.72
CKS2P33552 AC016839.1-201ENST00000578162 867 ntBASIC4.29□□□□□ -1.72
CKS2P33552 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC4.29□□□□□ -1.72
CKS2P33552 STARD6-204ENST00000584040 660 ntTSL 3 BASIC4.29□□□□□ -1.72
CKS2P33552 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC4.29□□□□□ -1.72
CKS2P33552 AC090241.1-201ENST00000587732 621 ntBASIC4.29□□□□□ -1.72
CKS2P33552 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC4.29□□□□□ -1.72
CKS2P33552 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC4.29□□□□□ -1.72
CKS2P33552 RPS4XP21-201ENST00000603814 750 ntBASIC4.29□□□□□ -1.72
CKS2P33552 AL035417.2-201ENST00000603887 796 ntBASIC4.29□□□□□ -1.72
CKS2P33552 HIRAP1-201ENST00000605318 787 ntBASIC4.29□□□□□ -1.72
CKS2P33552 AL591167.1-201ENST00000607321 456 ntBASIC4.29□□□□□ -1.72
CKS2P33552 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC4.29□□□□□ -1.72
CKS2P33552 AL353747.4-202ENST00000625787 674 ntTSL 3 BASIC4.29□□□□□ -1.72
CKS2P33552 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC4.29□□□□□ -1.72
CKS2P33552 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
CKS2P33552 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC4.29□□□□□ -1.72
CKS2P33552 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
CKS2P33552 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CKS2P33552 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CKS2P33552 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CKS2P33552 AC120036.2-201ENST00000509729 1474 ntBASIC4.29□□□□□ -1.72
CKS2P33552 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC4.29□□□□□ -1.72
CKS2P33552 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
CKS2P33552 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.29□□□□□ -1.72
CKS2P33552 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CKS2P33552 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
CKS2P33552 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CKS2P33552 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CKS2P33552 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC4.28□□□□□ -1.72
CKS2P33552 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
CKS2P33552 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC4.28□□□□□ -1.72
CKS2P33552 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CKS2P33552 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CKS2P33552 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CKS2P33552 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
CKS2P33552 AL449283.1-201ENST00000602631 3403 ntBASIC4.28□□□□□ -1.72
CKS2P33552 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CKS2P33552 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CKS2P33552 AC100810.3-201ENST00000633189 2240 ntBASIC4.28□□□□□ -1.72
CKS2P33552 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CKS2P33552 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CKS2P33552 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CKS2P33552 SNORA11D-201ENST00000408548 128 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms