Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 CHCHD4P5-201ENST00000436684 427 ntBASIC5.18□□□□□ -1.58
HLA-DMAP28067 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC5.18□□□□□ -1.58
HLA-DMAP28067 TCEA1P3-201ENST00000443005 880 ntBASIC5.18□□□□□ -1.58
HLA-DMAP28067 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC5.18□□□□□ -1.58
HLA-DMAP28067 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.18□□□□□ -1.58
HLA-DMAP28067 AC022080.2-201ENST00000452932 533 ntBASIC5.18□□□□□ -1.58
HLA-DMAP28067 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC5.18□□□□□ -1.58
HLA-DMAP28067 AC079080.1-201ENST00000479841 822 ntBASIC5.18□□□□□ -1.58
HLA-DMAP28067 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.18□□□□□ -1.58
HLA-DMAP28067 AC091544.1-201ENST00000484702 348 ntBASIC5.18□□□□□ -1.58
HLA-DMAP28067 USP9YP2-201ENST00000504503 1000 ntBASIC5.18□□□□□ -1.58
HLA-DMAP28067 USP9YP1-201ENST00000513521 1002 ntBASIC5.18□□□□□ -1.58
HLA-DMAP28067 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.18□□□□□ -1.58
HLA-DMAP28067 AC083967.1-201ENST00000522354 515 ntTSL 3 BASIC5.18□□□□□ -1.58
HLA-DMAP28067 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.18□□□□□ -1.58
HLA-DMAP28067 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC5.18□□□□□ -1.58
HLA-DMAP28067 NPIPB14P-203ENST00000532298 987 ntBASIC5.18□□□□□ -1.58
HLA-DMAP28067 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.18□□□□□ -1.58
HLA-DMAP28067 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.18□□□□□ -1.58
HLA-DMAP28067 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC5.18□□□□□ -1.58
HLA-DMAP28067 AC133552.4-201ENST00000576103 676 ntBASIC5.18□□□□□ -1.58
HLA-DMAP28067 RN7SL311P-201ENST00000579858 306 ntBASIC5.18□□□□□ -1.58
HLA-DMAP28067 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.18□□□□□ -1.58
HLA-DMAP28067 DYNLL1P1-201ENST00000595442 269 ntBASIC5.18□□□□□ -1.58
HLA-DMAP28067 AC114477.1-201ENST00000605097 605 ntBASIC5.18□□□□□ -1.58
HLA-DMAP28067 AL137067.2-201ENST00000621202 131 ntBASIC5.18□□□□□ -1.58
HLA-DMAP28067 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC5.18□□□□□ -1.58
HLA-DMAP28067 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
HLA-DMAP28067 SMG1P5-202ENST00000529428 4219 ntBASIC5.18□□□□□ -1.58
HLA-DMAP28067 SMG1P2-201ENST00000566127 4221 ntBASIC5.18□□□□□ -1.58
HLA-DMAP28067 TCP1P3-201ENST00000414406 1498 ntBASIC5.18□□□□□ -1.58
HLA-DMAP28067 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DMAP28067 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
HLA-DMAP28067 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
HLA-DMAP28067 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DMAP28067 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.18□□□□□ -1.58
HLA-DMAP28067 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
HLA-DMAP28067 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.18□□□□□ -1.58
HLA-DMAP28067 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DMAP28067 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DMAP28067 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
HLA-DMAP28067 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
HLA-DMAP28067 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.18□□□□□ -1.58
HLA-DMAP28067 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.17□□□□□ -1.58
HLA-DMAP28067 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HLA-DMAP28067 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HLA-DMAP28067 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HLA-DMAP28067 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
HLA-DMAP28067 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HLA-DMAP28067 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
HLA-DMAP28067 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HLA-DMAP28067 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
HLA-DMAP28067 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
HLA-DMAP28067 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
HLA-DMAP28067 SNORA70.6-201ENST00000383934 134 ntBASIC5.17□□□□□ -1.58
HLA-DMAP28067 EEF1GP6-201ENST00000402309 905 ntBASIC5.17□□□□□ -1.58
HLA-DMAP28067 RPL12P23-201ENST00000405880 490 ntBASIC5.17□□□□□ -1.58
HLA-DMAP28067 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HLA-DMAP28067 HYALP1-201ENST00000417674 1279 ntBASIC5.17□□□□□ -1.58
HLA-DMAP28067 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.17□□□□□ -1.58
HLA-DMAP28067 GNG5P5-201ENST00000420444 220 ntBASIC5.17□□□□□ -1.58
HLA-DMAP28067 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.17□□□□□ -1.58
HLA-DMAP28067 RBMY2JP-201ENST00000425544 1059 ntBASIC5.17□□□□□ -1.58
HLA-DMAP28067 AC083862.1-201ENST00000427378 1242 ntBASIC5.17□□□□□ -1.58
HLA-DMAP28067 AC242426.1-201ENST00000435270 960 ntBASIC5.17□□□□□ -1.58
HLA-DMAP28067 AC013410.1-201ENST00000436223 1232 ntBASIC5.17□□□□□ -1.58
HLA-DMAP28067 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC5.17□□□□□ -1.58
HLA-DMAP28067 AL020997.1-201ENST00000446554 349 ntBASIC5.17□□□□□ -1.58
HLA-DMAP28067 RPL23AP60-201ENST00000450011 454 ntBASIC5.17□□□□□ -1.58
HLA-DMAP28067 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
HLA-DMAP28067 COX6B1P2-201ENST00000489624 230 ntBASIC5.17□□□□□ -1.58
HLA-DMAP28067 AC009269.1-203ENST00000496414 828 ntTSL 2 BASIC5.17□□□□□ -1.58
HLA-DMAP28067 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HLA-DMAP28067 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.17□□□□□ -1.58
HLA-DMAP28067 AC097460.2-201ENST00000511857 741 ntBASIC5.17□□□□□ -1.58
HLA-DMAP28067 AC137549.1-201ENST00000514243 533 ntBASIC5.17□□□□□ -1.58
HLA-DMAP28067 LDHBP3-201ENST00000514909 822 ntBASIC5.17□□□□□ -1.58
HLA-DMAP28067 SCARNA11.1-201ENST00000516918 132 ntBASIC5.17□□□□□ -1.58
HLA-DMAP28067 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC5.17□□□□□ -1.58
HLA-DMAP28067 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.17□□□□□ -1.58
HLA-DMAP28067 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC5.17□□□□□ -1.58
HLA-DMAP28067 AC005519.1-201ENST00000554490 601 ntBASIC5.17□□□□□ -1.58
HLA-DMAP28067 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC5.17□□□□□ -1.58
HLA-DMAP28067 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.17□□□□□ -1.58
HLA-DMAP28067 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC5.17□□□□□ -1.58
HLA-DMAP28067 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC5.17□□□□□ -1.58
HLA-DMAP28067 AC024085.1-201ENST00000604299 432 ntBASIC5.17□□□□□ -1.58
HLA-DMAP28067 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HLA-DMAP28067 SNX18P12-201ENST00000624821 759 ntBASIC5.17□□□□□ -1.58
HLA-DMAP28067 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.17□□□□□ -1.58
HLA-DMAP28067 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HLA-DMAP28067 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.17□□□□□ -1.58
HLA-DMAP28067 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.17□□□□□ -1.58
HLA-DMAP28067 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
HLA-DMAP28067 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
HLA-DMAP28067 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HLA-DMAP28067 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.17□□□□□ -1.58
HLA-DMAP28067 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HLA-DMAP28067 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
HLA-DMAP28067 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms