Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 GRIA4-206ENST00000525187 2822 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CD40P25942 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
CD40P25942 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CD40P25942 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CD40P25942 SEC63P2-201ENST00000503863 1939 ntBASIC6.1□□□□□ -1.43
CD40P25942 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CD40P25942 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CD40P25942 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CD40P25942 NACA3P-201ENST00000359690 648 ntBASIC6.1□□□□□ -1.43
CD40P25942 NOX1-203ENST00000372964 661 ntTSL 2 BASIC6.1□□□□□ -1.43
CD40P25942 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
CD40P25942 AL136100.1-201ENST00000407696 330 ntBASIC6.1□□□□□ -1.43
CD40P25942 C2orf76-203ENST00000409523 747 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CD40P25942 RN7SKP182-201ENST00000410772 298 ntBASIC6.1□□□□□ -1.43
CD40P25942 AC105402.1-201ENST00000413336 545 ntBASIC6.1□□□□□ -1.43
CD40P25942 LUZP4P1-201ENST00000415420 344 ntBASIC6.1□□□□□ -1.43
CD40P25942 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC6.1□□□□□ -1.43
CD40P25942 VWC2L-IT1-201ENST00000416430 467 ntTSL 3 BASIC6.1□□□□□ -1.43
CD40P25942 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC6.1□□□□□ -1.43
CD40P25942 PTP4A1P1-201ENST00000420539 515 ntBASIC6.1□□□□□ -1.43
CD40P25942 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC6.1□□□□□ -1.43
CD40P25942 EIF4A1P2-201ENST00000422633 1220 ntBASIC6.1□□□□□ -1.43
CD40P25942 RPF2P1-201ENST00000424137 906 ntBASIC6.1□□□□□ -1.43
CD40P25942 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC6.1□□□□□ -1.43
CD40P25942 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC6.1□□□□□ -1.43
CD40P25942 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC6.1□□□□□ -1.43
CD40P25942 MTCO1P52-201ENST00000433928 531 ntBASIC6.1□□□□□ -1.43
CD40P25942 UBE2D3P1-201ENST00000436669 444 ntBASIC6.1□□□□□ -1.43
CD40P25942 AL845321.1-201ENST00000444603 348 ntBASIC6.1□□□□□ -1.43
CD40P25942 SDHCP3-201ENST00000445371 506 ntBASIC6.1□□□□□ -1.43
CD40P25942 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC6.1□□□□□ -1.43
CD40P25942 PRDX1P1-201ENST00000449329 596 ntBASIC6.1□□□□□ -1.43
CD40P25942 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.1□□□□□ -1.43
CD40P25942 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC6.1□□□□□ -1.43
CD40P25942 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC6.1□□□□□ -1.43
CD40P25942 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC6.1□□□□□ -1.43
CD40P25942 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CD40P25942 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC6.1□□□□□ -1.43
CD40P25942 AC090819.1-201ENST00000523800 1111 ntBASIC6.1□□□□□ -1.43
CD40P25942 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.1□□□□□ -1.43
CD40P25942 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC6.1□□□□□ -1.43
CD40P25942 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.1□□□□□ -1.43
CD40P25942 AC027104.1-201ENST00000563702 681 ntBASIC6.1□□□□□ -1.43
CD40P25942 OR4C49P-201ENST00000563891 900 ntBASIC6.1□□□□□ -1.43
CD40P25942 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC6.1□□□□□ -1.43
CD40P25942 STARD6-202ENST00000577499 696 ntTSL 2 BASIC6.1□□□□□ -1.43
CD40P25942 EIF4A3P1-201ENST00000578499 647 ntBASIC6.1□□□□□ -1.43
CD40P25942 AC022662.1-201ENST00000580252 331 ntBASIC6.1□□□□□ -1.43
CD40P25942 RN7SL32P-201ENST00000580514 281 ntBASIC6.1□□□□□ -1.43
CD40P25942 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC6.1□□□□□ -1.43
CD40P25942 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
CD40P25942 AC011447.2-201ENST00000592921 283 ntBASIC6.1□□□□□ -1.43
CD40P25942 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC6.1□□□□□ -1.43
CD40P25942 IGKV1OR2-9-201ENST00000603957 287 ntBASIC6.1□□□□□ -1.43
CD40P25942 IGKV1OR2-11-201ENST00000604120 287 ntBASIC6.1□□□□□ -1.43
CD40P25942 HIRAP1-201ENST00000605318 787 ntBASIC6.1□□□□□ -1.43
CD40P25942 VN1R7P-201ENST00000619242 903 ntBASIC6.1□□□□□ -1.43
CD40P25942 AL157770.1-201ENST00000623049 439 ntBASIC6.1□□□□□ -1.43
CD40P25942 AC063952.1-203ENST00000634410 658 ntBASIC6.1□□□□□ -1.43
CD40P25942 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CD40P25942 TSHZ2-201ENST00000329613 3093 ntTSL 4 BASIC6.1□□□□□ -1.43
CD40P25942 PEX19-201ENST00000368072 3661 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CD40P25942 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC6.1□□□□□ -1.43
CD40P25942 Z99129.4-201ENST00000624649 2435 ntBASIC6.1□□□□□ -1.43
CD40P25942 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC6.1□□□□□ -1.43
CD40P25942 SLC16A4-203ENST00000437429 2372 ntTSL 2 BASIC6.1□□□□□ -1.43
CD40P25942 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
CD40P25942 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
CD40P25942 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
CD40P25942 AC012078.1-201ENST00000405035 1646 ntBASIC6.1□□□□□ -1.43
CD40P25942 AC079178.2-201ENST00000439323 1624 ntBASIC6.1□□□□□ -1.43
CD40P25942 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CD40P25942 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
CD40P25942 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CD40P25942 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC6.1□□□□□ -1.43
CD40P25942 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
CD40P25942 ADGRF2-204ENST00000507065 3043 ntTSL 5 BASIC6.09□□□□□ -1.43
CD40P25942 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
CD40P25942 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC6.09□□□□□ -1.43
CD40P25942 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CD40P25942 TEKT1-201ENST00000338694 3421 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CD40P25942 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CD40P25942 ACKR2-202ENST00000442925 2879 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CD40P25942 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
CD40P25942 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CD40P25942 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC6.09□□□□□ -1.43
CD40P25942 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
CD40P25942 LCOR-201ENST00000286067 4542 ntBASIC6.09□□□□□ -1.43
CD40P25942 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
CD40P25942 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CD40P25942 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC6.09□□□□□ -1.43
CD40P25942 AL355488.1-201ENST00000449169 2611 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CD40P25942 MED6-212ENST00000615788 1700 ntTSL 5 BASIC6.09□□□□□ -1.43
CD40P25942 ENSAP3-201ENST00000312710 333 ntBASIC6.09□□□□□ -1.43
CD40P25942 OR5D18-201ENST00000333976 991 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
CD40P25942 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CD40P25942 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
CD40P25942 AC006511.2-201ENST00000388966 660 ntBASIC6.09□□□□□ -1.43
CD40P25942 SNORA40.2-201ENST00000390847 128 ntBASIC6.09□□□□□ -1.43
CD40P25942 AL359715.1-201ENST00000404330 555 ntBASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms