Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
CTLA4P16410 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CTLA4P16410 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
CTLA4P16410 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CTLA4P16410 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.27□□□□□ -1.57
CTLA4P16410 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
CTLA4P16410 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CTLA4P16410 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CTLA4P16410 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC5.26□□□□□ -1.57
CTLA4P16410 GNL2P1-201ENST00000451274 2190 ntBASIC5.26□□□□□ -1.57
CTLA4P16410 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
CTLA4P16410 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.26□□□□□ -1.57
CTLA4P16410 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.26□□□□□ -1.57
CTLA4P16410 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.26□□□□□ -1.57
CTLA4P16410 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.26□□□□□ -1.57
CTLA4P16410 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CTLA4P16410 AC008627.1-201ENST00000517511 1704 ntBASIC5.26□□□□□ -1.57
CTLA4P16410 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.26□□□□□ -1.57
CTLA4P16410 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
CTLA4P16410 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC5.26□□□□□ -1.57
CTLA4P16410 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CTLA4P16410 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.26□□□□□ -1.57
CTLA4P16410 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.26□□□□□ -1.57
CTLA4P16410 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CTLA4P16410 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.26□□□□□ -1.57
CTLA4P16410 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CTLA4P16410 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
CTLA4P16410 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
CTLA4P16410 AC121334.1-201ENST00000396414 802 ntBASIC5.26□□□□□ -1.57
CTLA4P16410 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.26□□□□□ -1.57
CTLA4P16410 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.26□□□□□ -1.57
CTLA4P16410 AC021876.1-201ENST00000425959 359 ntBASIC5.26□□□□□ -1.57
CTLA4P16410 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC5.26□□□□□ -1.57
CTLA4P16410 NPM1P25-201ENST00000429734 854 ntBASIC5.26□□□□□ -1.57
CTLA4P16410 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.26□□□□□ -1.57
CTLA4P16410 RPS12P17-201ENST00000438591 377 ntBASIC5.26□□□□□ -1.57
CTLA4P16410 AL663074.2-201ENST00000440621 479 ntBASIC5.26□□□□□ -1.57
CTLA4P16410 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC5.26□□□□□ -1.57
CTLA4P16410 AL445466.1-201ENST00000448432 357 ntBASIC5.26□□□□□ -1.57
CTLA4P16410 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CTLA4P16410 HMGB1P7-201ENST00000450921 612 ntBASIC5.26□□□□□ -1.57
CTLA4P16410 AC079080.1-201ENST00000479841 822 ntBASIC5.26□□□□□ -1.57
CTLA4P16410 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CTLA4P16410 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.26□□□□□ -1.57
CTLA4P16410 AC008629.2-201ENST00000503783 483 ntBASIC5.26□□□□□ -1.57
CTLA4P16410 AL158068.1-201ENST00000506116 616 ntBASIC5.26□□□□□ -1.57
CTLA4P16410 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.26□□□□□ -1.57
CTLA4P16410 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.26□□□□□ -1.57
CTLA4P16410 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.26□□□□□ -1.57
CTLA4P16410 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC5.26□□□□□ -1.57
CTLA4P16410 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.26□□□□□ -1.57
CTLA4P16410 OR1E3-201ENST00000575608 948 ntBASIC5.26□□□□□ -1.57
CTLA4P16410 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.26□□□□□ -1.57
CTLA4P16410 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.26□□□□□ -1.57
CTLA4P16410 AC006115.2-201ENST00000596823 202 ntBASIC5.26□□□□□ -1.57
CTLA4P16410 AL021918.2-201ENST00000613415 194 ntBASIC5.26□□□□□ -1.57
CTLA4P16410 AC111152.1-202ENST00000635848 339 ntBASIC5.26□□□□□ -1.57
CTLA4P16410 AC099654.15-201ENST00000639802 509 ntBASIC5.26□□□□□ -1.57
CTLA4P16410 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CTLA4P16410 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CTLA4P16410 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.26□□□□□ -1.57
CTLA4P16410 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
CTLA4P16410 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
CTLA4P16410 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CTLA4P16410 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CTLA4P16410 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC5.26□□□□□ -1.57
CTLA4P16410 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CTLA4P16410 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.26□□□□□ -1.57
CTLA4P16410 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
CTLA4P16410 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
CTLA4P16410 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.25□□□□□ -1.57
CTLA4P16410 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.25□□□□□ -1.57
CTLA4P16410 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
CTLA4P16410 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CTLA4P16410 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
CTLA4P16410 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.25□□□□□ -1.57
CTLA4P16410 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CTLA4P16410 PSG10P-201ENST00000501199 1500 ntBASIC5.25□□□□□ -1.57
CTLA4P16410 FUNDC2P3-201ENST00000334716 533 ntBASIC5.25□□□□□ -1.57
CTLA4P16410 RBBP4P5-201ENST00000398583 1266 ntBASIC5.25□□□□□ -1.57
CTLA4P16410 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.25□□□□□ -1.57
CTLA4P16410 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.25□□□□□ -1.57
CTLA4P16410 AL445928.1-201ENST00000435545 222 ntBASIC5.25□□□□□ -1.57
CTLA4P16410 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CTLA4P16410 RSU1P1-201ENST00000453416 441 ntBASIC5.25□□□□□ -1.57
CTLA4P16410 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.25□□□□□ -1.57
CTLA4P16410 ST13P12-201ENST00000508958 1094 ntBASIC5.25□□□□□ -1.57
CTLA4P16410 RNU6ATAC39P-201ENST00000516309 149 ntBASIC5.25□□□□□ -1.57
CTLA4P16410 MIR2117-201ENST00000516780 80 ntBASIC5.25□□□□□ -1.57
CTLA4P16410 AC078899.1-201ENST00000521432 1185 ntBASIC5.25□□□□□ -1.57
CTLA4P16410 OR4A42P-201ENST00000531397 938 ntBASIC5.25□□□□□ -1.57
CTLA4P16410 HNRNPCP1-201ENST00000556181 766 ntBASIC5.25□□□□□ -1.57
CTLA4P16410 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.25□□□□□ -1.57
CTLA4P16410 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC5.25□□□□□ -1.57
CTLA4P16410 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.25□□□□□ -1.57
CTLA4P16410 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.25□□□□□ -1.57
CTLA4P16410 AC138207.8-204ENST00000579588 527 ntBASIC5.25□□□□□ -1.57
CTLA4P16410 AC012254.3-201ENST00000591183 2117 ntBASIC5.25□□□□□ -1.57
CTLA4P16410 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.25□□□□□ -1.57
CTLA4P16410 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms