Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC5.51□□□□□ -1.53
HLA-DOBP13765 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.51□□□□□ -1.53
HLA-DOBP13765 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.51□□□□□ -1.53
HLA-DOBP13765 AC090651.1-201ENST00000567865 634 ntBASIC5.51□□□□□ -1.53
HLA-DOBP13765 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.51□□□□□ -1.53
HLA-DOBP13765 AL158211.2-201ENST00000607282 395 ntBASIC5.51□□□□□ -1.53
HLA-DOBP13765 AC024933.1-201ENST00000608472 348 ntBASIC5.51□□□□□ -1.53
HLA-DOBP13765 uc_338.29-201ENST00000615099 168 ntBASIC5.51□□□□□ -1.53
HLA-DOBP13765 AC009032.1-201ENST00000617574 431 ntBASIC5.51□□□□□ -1.53
HLA-DOBP13765 AL356490.1-201ENST00000623079 479 ntBASIC5.51□□□□□ -1.53
HLA-DOBP13765 AC021766.1-201ENST00000624404 741 ntBASIC5.51□□□□□ -1.53
HLA-DOBP13765 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.51□□□□□ -1.53
HLA-DOBP13765 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.51□□□□□ -1.53
HLA-DOBP13765 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HLA-DOBP13765 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HLA-DOBP13765 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
HLA-DOBP13765 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
HLA-DOBP13765 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.51□□□□□ -1.53
HLA-DOBP13765 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.51□□□□□ -1.53
HLA-DOBP13765 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HLA-DOBP13765 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.51□□□□□ -1.53
HLA-DOBP13765 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
HLA-DOBP13765 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HLA-DOBP13765 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HLA-DOBP13765 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
HLA-DOBP13765 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC5.51□□□□□ -1.53
HLA-DOBP13765 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HLA-DOBP13765 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HLA-DOBP13765 AL662795.2-201ENST00000624252 3706 ntBASIC5.5□□□□□ -1.53
HLA-DOBP13765 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
HLA-DOBP13765 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
HLA-DOBP13765 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
HLA-DOBP13765 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HLA-DOBP13765 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HLA-DOBP13765 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HLA-DOBP13765 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HLA-DOBP13765 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
HLA-DOBP13765 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC5.5□□□□□ -1.53
HLA-DOBP13765 OR1F12-201ENST00000402365 945 ntBASIC5.5□□□□□ -1.53
HLA-DOBP13765 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.5□□□□□ -1.53
HLA-DOBP13765 RN7SKP151-201ENST00000410230 316 ntBASIC5.5□□□□□ -1.53
HLA-DOBP13765 RNA5SP198-201ENST00000410376 127 ntBASIC5.5□□□□□ -1.53
HLA-DOBP13765 RNA5SP251-201ENST00000410614 137 ntBASIC5.5□□□□□ -1.53
HLA-DOBP13765 RN7SKP108-201ENST00000411367 328 ntBASIC5.5□□□□□ -1.53
HLA-DOBP13765 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC5.5□□□□□ -1.53
HLA-DOBP13765 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.5□□□□□ -1.53
HLA-DOBP13765 HSFY1P1-201ENST00000423928 1178 ntBASIC5.5□□□□□ -1.53
HLA-DOBP13765 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC5.5□□□□□ -1.53
HLA-DOBP13765 AL590004.3-202ENST00000445883 451 ntBASIC5.5□□□□□ -1.53
HLA-DOBP13765 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.5□□□□□ -1.53
HLA-DOBP13765 CYCSP53-201ENST00000455540 265 ntBASIC5.5□□□□□ -1.53
HLA-DOBP13765 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.5□□□□□ -1.53
HLA-DOBP13765 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HLA-DOBP13765 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC5.5□□□□□ -1.53
HLA-DOBP13765 RPL12P30-201ENST00000488389 499 ntBASIC5.5□□□□□ -1.53
HLA-DOBP13765 AC008945.1-201ENST00000505144 499 ntBASIC5.5□□□□□ -1.53
HLA-DOBP13765 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC5.5□□□□□ -1.53
HLA-DOBP13765 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC5.5□□□□□ -1.53
HLA-DOBP13765 HMGN1P17-201ENST00000513734 295 ntBASIC5.5□□□□□ -1.53
HLA-DOBP13765 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.5□□□□□ -1.53
HLA-DOBP13765 OR4A46P-201ENST00000527255 933 ntBASIC5.5□□□□□ -1.53
HLA-DOBP13765 OR6M2P-201ENST00000529831 871 ntBASIC5.5□□□□□ -1.53
HLA-DOBP13765 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HLA-DOBP13765 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC5.5□□□□□ -1.53
HLA-DOBP13765 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC5.5□□□□□ -1.53
HLA-DOBP13765 AC008555.7-201ENST00000605008 583 ntBASIC5.5□□□□□ -1.53
HLA-DOBP13765 AC096586.2-201ENST00000610260 441 ntBASIC5.5□□□□□ -1.53
HLA-DOBP13765 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
HLA-DOBP13765 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HLA-DOBP13765 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
HLA-DOBP13765 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.5□□□□□ -1.53
HLA-DOBP13765 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.5□□□□□ -1.53
HLA-DOBP13765 AL359091.1-201ENST00000449048 1734 ntBASIC5.5□□□□□ -1.53
HLA-DOBP13765 AC011416.1-201ENST00000514947 1732 ntBASIC5.5□□□□□ -1.53
HLA-DOBP13765 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HLA-DOBP13765 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC5.5□□□□□ -1.53
HLA-DOBP13765 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
HLA-DOBP13765 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HLA-DOBP13765 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
HLA-DOBP13765 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC5.5□□□□□ -1.53
HLA-DOBP13765 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
HLA-DOBP13765 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
HLA-DOBP13765 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HLA-DOBP13765 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC5.5□□□□□ -1.53
HLA-DOBP13765 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HLA-DOBP13765 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HLA-DOBP13765 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
HLA-DOBP13765 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HLA-DOBP13765 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
HLA-DOBP13765 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC5.5□□□□□ -1.53
HLA-DOBP13765 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HLA-DOBP13765 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HLA-DOBP13765 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HLA-DOBP13765 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HLA-DOBP13765 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
HLA-DOBP13765 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HLA-DOBP13765 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HLA-DOBP13765 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HLA-DOBP13765 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC5.49□□□□□ -1.53
HLA-DOBP13765 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms