Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
MMP3P08254 OR10R3P-201ENST00000361688 942 ntBASIC6.71□□□□□ -1.34
MMP3P08254 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
MMP3P08254 RN7SKP293-201ENST00000411389 296 ntBASIC6.71□□□□□ -1.34
MMP3P08254 AL513325.1-201ENST00000417716 1034 ntBASIC6.71□□□□□ -1.34
MMP3P08254 NMD3P2-201ENST00000421815 761 ntBASIC6.71□□□□□ -1.34
MMP3P08254 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
MMP3P08254 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC6.71□□□□□ -1.34
MMP3P08254 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.71□□□□□ -1.34
MMP3P08254 OR13K1P-201ENST00000444577 975 ntBASIC6.71□□□□□ -1.34
MMP3P08254 VN1R96P-201ENST00000446052 858 ntBASIC6.71□□□□□ -1.34
MMP3P08254 YWHAEP1-201ENST00000453697 763 ntBASIC6.71□□□□□ -1.34
MMP3P08254 RN7SL57P-201ENST00000493687 290 ntBASIC6.71□□□□□ -1.34
MMP3P08254 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC6.71□□□□□ -1.34
MMP3P08254 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.71□□□□□ -1.34
MMP3P08254 RNU6-362P-201ENST00000516736 90 ntBASIC6.71□□□□□ -1.34
MMP3P08254 AC027308.1-201ENST00000517993 110 ntBASIC6.71□□□□□ -1.34
MMP3P08254 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC6.71□□□□□ -1.34
MMP3P08254 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
MMP3P08254 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
MMP3P08254 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC6.71□□□□□ -1.34
MMP3P08254 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.71□□□□□ -1.34
MMP3P08254 AC090022.1-201ENST00000546569 311 ntBASIC6.71□□□□□ -1.34
MMP3P08254 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC6.71□□□□□ -1.34
MMP3P08254 AC010547.6-201ENST00000571789 193 ntBASIC6.71□□□□□ -1.34
MMP3P08254 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.71□□□□□ -1.34
MMP3P08254 AL021368.3-201ENST00000607119 578 ntBASIC6.71□□□□□ -1.34
MMP3P08254 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC6.71□□□□□ -1.34
MMP3P08254 AP005212.4-201ENST00000614206 710 ntBASIC6.71□□□□□ -1.34
MMP3P08254 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC6.71□□□□□ -1.34
MMP3P08254 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
MMP3P08254 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
MMP3P08254 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
MMP3P08254 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
MMP3P08254 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
MMP3P08254 AC092692.1-201ENST00000623625 2595 ntBASIC6.71□□□□□ -1.34
MMP3P08254 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
MMP3P08254 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
MMP3P08254 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
MMP3P08254 PARN-201ENST00000341484 2100 ntTSL 2 BASIC6.71□□□□□ -1.34
MMP3P08254 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
MMP3P08254 AC005618.1-201ENST00000606901 3148 ntBASIC6.71□□□□□ -1.34
MMP3P08254 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC6.71□□□□□ -1.34
MMP3P08254 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
MMP3P08254 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC6.71□□□□□ -1.34
MMP3P08254 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.71□□□□□ -1.34
MMP3P08254 ZNF812P-201ENST00000457674 1694 ntBASIC6.71□□□□□ -1.34
MMP3P08254 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC6.71□□□□□ -1.34
MMP3P08254 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
MMP3P08254 AL021877.2-201ENST00000624442 10684 ntBASIC6.71□□□□□ -1.34
MMP3P08254 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
MMP3P08254 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC6.7□□□□□ -1.34
MMP3P08254 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
MMP3P08254 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.7□□□□□ -1.34
MMP3P08254 PDZK1P1-202ENST00000425209 1350 ntBASIC6.7□□□□□ -1.34
MMP3P08254 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
MMP3P08254 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
MMP3P08254 AP002833.3-201ENST00000625075 2265 ntBASIC6.7□□□□□ -1.34
MMP3P08254 AL117339.4-201ENST00000608335 7063 ntBASIC6.7□□□□□ -1.34
MMP3P08254 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
MMP3P08254 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
MMP3P08254 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC6.7□□□□□ -1.34
MMP3P08254 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
MMP3P08254 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
MMP3P08254 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
MMP3P08254 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
MMP3P08254 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
MMP3P08254 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC6.7□□□□□ -1.34
MMP3P08254 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
MMP3P08254 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
MMP3P08254 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC6.7□□□□□ -1.34
MMP3P08254 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC6.7□□□□□ -1.34
MMP3P08254 ZNF736P10Y-201ENST00000403990 1110 ntBASIC6.7□□□□□ -1.34
MMP3P08254 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.7□□□□□ -1.34
MMP3P08254 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC6.7□□□□□ -1.34
MMP3P08254 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC6.7□□□□□ -1.34
MMP3P08254 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.7□□□□□ -1.34
MMP3P08254 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC6.7□□□□□ -1.34
MMP3P08254 AC110749.1-201ENST00000462007 357 ntBASIC6.7□□□□□ -1.34
MMP3P08254 AL136038.1-201ENST00000497246 351 ntBASIC6.7□□□□□ -1.34
MMP3P08254 CYCSP22-201ENST00000517555 339 ntBASIC6.7□□□□□ -1.34
MMP3P08254 AP005639.1-201ENST00000526939 192 ntBASIC6.7□□□□□ -1.34
MMP3P08254 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC6.7□□□□□ -1.34
MMP3P08254 MRPS21P9-201ENST00000571150 257 ntBASIC6.7□□□□□ -1.34
MMP3P08254 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
MMP3P08254 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC6.7□□□□□ -1.34
MMP3P08254 AL049840.6-201ENST00000604583 345 ntBASIC6.7□□□□□ -1.34
MMP3P08254 FAM27E4-201ENST00000605259 342 ntBASIC6.7□□□□□ -1.34
MMP3P08254 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.7□□□□□ -1.34
MMP3P08254 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC6.7□□□□□ -1.34
MMP3P08254 MIR193BHG-214ENST00000641765 509 ntBASIC6.7□□□□□ -1.34
MMP3P08254 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
MMP3P08254 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
MMP3P08254 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC6.7□□□□□ -1.34
MMP3P08254 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
MMP3P08254 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.7□□□□□ -1.34
MMP3P08254 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.7□□□□□ -1.34
MMP3P08254 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
MMP3P08254 AC130360.2-201ENST00000533477 1556 ntBASIC6.69□□□□□ -1.34
MMP3P08254 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms