Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.01□□□□□ -1.45
HLA-DQB2P05538 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.01□□□□□ -1.45
HLA-DQB2P05538 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.01□□□□□ -1.45
HLA-DQB2P05538 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
HLA-DQB2P05538 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
HLA-DQB2P05538 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
HLA-DQB2P05538 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
HLA-DQB2P05538 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
HLA-DQB2P05538 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
HLA-DQB2P05538 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
HLA-DQB2P05538 AL121977.1-201ENST00000401636 979 ntBASIC6.01□□□□□ -1.45
HLA-DQB2P05538 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC6.01□□□□□ -1.45
HLA-DQB2P05538 AC245884.2-201ENST00000426257 404 ntBASIC6.01□□□□□ -1.45
HLA-DQB2P05538 BX679664.2-201ENST00000439282 283 ntBASIC6.01□□□□□ -1.45
HLA-DQB2P05538 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
HLA-DQB2P05538 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.01□□□□□ -1.45
HLA-DQB2P05538 RN7SL193P-201ENST00000491708 276 ntBASIC6.01□□□□□ -1.45
HLA-DQB2P05538 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
HLA-DQB2P05538 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.01□□□□□ -1.45
HLA-DQB2P05538 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC6.01□□□□□ -1.45
HLA-DQB2P05538 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.01□□□□□ -1.45
HLA-DQB2P05538 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC6.01□□□□□ -1.45
HLA-DQB2P05538 CETN3-206ENST00000522864 738 ntTSL 3 BASIC6.01□□□□□ -1.45
HLA-DQB2P05538 AP003396.4-201ENST00000527574 265 ntBASIC6.01□□□□□ -1.45
HLA-DQB2P05538 OR4A42P-201ENST00000531397 938 ntBASIC6.01□□□□□ -1.45
HLA-DQB2P05538 AC090424.1-201ENST00000535243 736 ntBASIC6.01□□□□□ -1.45
HLA-DQB2P05538 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC6.01□□□□□ -1.45
HLA-DQB2P05538 AC007956.1-201ENST00000555623 542 ntBASIC6.01□□□□□ -1.45
HLA-DQB2P05538 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC6.01□□□□□ -1.45
HLA-DQB2P05538 LINC00556-201ENST00000569603 412 ntBASIC6.01□□□□□ -1.45
HLA-DQB2P05538 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
HLA-DQB2P05538 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC6.01□□□□□ -1.45
HLA-DQB2P05538 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.01□□□□□ -1.45
HLA-DQB2P05538 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC6.01□□□□□ -1.45
HLA-DQB2P05538 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC6.01□□□□□ -1.45
HLA-DQB2P05538 AL049840.6-202ENST00000603373 279 ntBASIC6.01□□□□□ -1.45
HLA-DQB2P05538 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.01□□□□□ -1.45
HLA-DQB2P05538 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.01□□□□□ -1.45
HLA-DQB2P05538 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
HLA-DQB2P05538 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
HLA-DQB2P05538 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
HLA-DQB2P05538 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
HLA-DQB2P05538 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
HLA-DQB2P05538 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
HLA-DQB2P05538 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.01□□□□□ -1.45
HLA-DQB2P05538 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC6.01□□□□□ -1.45
HLA-DQB2P05538 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
HLA-DQB2P05538 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC6.01□□□□□ -1.45
HLA-DQB2P05538 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
HLA-DQB2P05538 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6□□□□□ -1.45
HLA-DQB2P05538 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
HLA-DQB2P05538 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6□□□□□ -1.45
HLA-DQB2P05538 CAP1P2-201ENST00000417455 1409 ntBASIC6□□□□□ -1.45
HLA-DQB2P05538 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6□□□□□ -1.45
HLA-DQB2P05538 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6□□□□□ -1.45
HLA-DQB2P05538 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HLA-DQB2P05538 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6□□□□□ -1.45
HLA-DQB2P05538 EIF3EP2-201ENST00000423042 1814 ntBASIC6□□□□□ -1.45
HLA-DQB2P05538 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HLA-DQB2P05538 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
HLA-DQB2P05538 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HLA-DQB2P05538 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6□□□□□ -1.45
HLA-DQB2P05538 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
HLA-DQB2P05538 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6□□□□□ -1.45
HLA-DQB2P05538 OR7E156P-201ENST00000400303 464 ntBASIC6□□□□□ -1.45
HLA-DQB2P05538 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6□□□□□ -1.45
HLA-DQB2P05538 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC6□□□□□ -1.45
HLA-DQB2P05538 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC6□□□□□ -1.45
HLA-DQB2P05538 AC110602.1-201ENST00000437414 318 ntBASIC6□□□□□ -1.45
HLA-DQB2P05538 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6□□□□□ -1.45
HLA-DQB2P05538 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC6□□□□□ -1.45
HLA-DQB2P05538 AL157777.1-201ENST00000468100 304 ntBASIC6□□□□□ -1.45
HLA-DQB2P05538 RN7SKP67-201ENST00000515905 235 ntBASIC6□□□□□ -1.45
HLA-DQB2P05538 SCARNA18.1-201ENST00000516330 83 ntBASIC6□□□□□ -1.45
HLA-DQB2P05538 AC027369.2-201ENST00000528030 440 ntBASIC6□□□□□ -1.45
HLA-DQB2P05538 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6□□□□□ -1.45
HLA-DQB2P05538 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6□□□□□ -1.45
HLA-DQB2P05538 MIR4776-2-201ENST00000580204 80 ntBASIC6□□□□□ -1.45
HLA-DQB2P05538 AL136131.3-201ENST00000607600 188 ntBASIC6□□□□□ -1.45
HLA-DQB2P05538 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6□□□□□ -1.45
HLA-DQB2P05538 OR11H2-202ENST00000641517 1085 ntBASIC6□□□□□ -1.45
HLA-DQB2P05538 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6□□□□□ -1.45
HLA-DQB2P05538 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6□□□□□ -1.45
HLA-DQB2P05538 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6□□□□□ -1.45
HLA-DQB2P05538 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6□□□□□ -1.45
HLA-DQB2P05538 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6□□□□□ -1.45
HLA-DQB2P05538 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6□□□□□ -1.45
HLA-DQB2P05538 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC6□□□□□ -1.45
HLA-DQB2P05538 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6□□□□□ -1.45
HLA-DQB2P05538 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
HLA-DQB2P05538 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.99□□□□□ -1.45
HLA-DQB2P05538 AL592430.1-202ENST00000414383 1546 ntTSL 3 BASIC5.99□□□□□ -1.45
HLA-DQB2P05538 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
HLA-DQB2P05538 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HLA-DQB2P05538 PARP4P2-201ENST00000446672 3326 ntBASIC5.99□□□□□ -1.45
HLA-DQB2P05538 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HLA-DQB2P05538 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
HLA-DQB2P05538 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HLA-DQB2P05538 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
HLA-DQB2P05538 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 136.1 ms