Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
APOBP04114 RNA5SP505-201ENST00000364748 108 ntBASIC3.53□□□□□ -1.84
APOBP04114 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC3.53□□□□□ -1.84
APOBP04114 OR5M12P-201ENST00000423388 929 ntBASIC3.53□□□□□ -1.84
APOBP04114 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC3.53□□□□□ -1.84
APOBP04114 HNRNPDLP2-201ENST00000455248 751 ntBASIC3.53□□□□□ -1.84
APOBP04114 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC3.53□□□□□ -1.84
APOBP04114 OR7H2P-201ENST00000513483 306 ntBASIC3.53□□□□□ -1.84
APOBP04114 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC3.53□□□□□ -1.84
APOBP04114 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.53□□□□□ -1.84
APOBP04114 RPL27-207ENST00000590864 569 ntTSL 2 BASIC3.53□□□□□ -1.84
APOBP04114 AL161616.1-201ENST00000611867 286 ntBASIC3.53□□□□□ -1.84
APOBP04114 ARID1B-232ENST00000637904 5913 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
APOBP04114 LCT-201ENST00000264162 6279 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
APOBP04114 GK5-201ENST00000392993 9837 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
APOBP04114 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
APOBP04114 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
APOBP04114 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
APOBP04114 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC3.53□□□□□ -1.84
APOBP04114 SVIL-201ENST00000355867 7586 ntAPPRIS P4 TSL 1 (best) BASIC3.53□□□□□ -1.84
APOBP04114 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
APOBP04114 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
APOBP04114 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
APOBP04114 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
APOBP04114 PPP2R2DP1-201ENST00000420526 637 ntBASIC3.53□□□□□ -1.84
APOBP04114 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC3.53□□□□□ -1.84
APOBP04114 AC068587.1-201ENST00000483613 781 ntBASIC3.53□□□□□ -1.84
APOBP04114 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC3.53□□□□□ -1.84
APOBP04114 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
APOBP04114 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC3.53□□□□□ -1.84
APOBP04114 AC134349.2-201ENST00000535136 910 ntBASIC3.53□□□□□ -1.84
APOBP04114 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC3.53□□□□□ -1.84
APOBP04114 AC087283.1-201ENST00000604029 1074 ntBASIC3.53□□□□□ -1.84
APOBP04114 MIR7641-1-201ENST00000627518 61 ntBASIC3.53□□□□□ -1.84
APOBP04114 COL24A1-201ENST00000370571 6825 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
APOBP04114 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
APOBP04114 AC098850.4-201ENST00000448331 8802 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
APOBP04114 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
APOBP04114 PLCXD2-205ENST00000636933 7710 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
APOBP04114 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC3.53□□□□□ -1.84
APOBP04114 AC008957.3-201ENST00000624112 2242 ntBASIC3.53□□□□□ -1.84
APOBP04114 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
APOBP04114 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
APOBP04114 AL035419.1-201ENST00000397037 564 ntBASIC3.53□□□□□ -1.84
APOBP04114 COX6CP17-201ENST00000421389 185 ntBASIC3.53□□□□□ -1.84
APOBP04114 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC3.53□□□□□ -1.84
APOBP04114 RN7SKP21-201ENST00000516503 220 ntBASIC3.53□□□□□ -1.84
APOBP04114 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC3.53□□□□□ -1.84
APOBP04114 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.53□□□□□ -1.84
APOBP04114 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC3.53□□□□□ -1.84
APOBP04114 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC3.53□□□□□ -1.84
APOBP04114 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC3.53□□□□□ -1.84
APOBP04114 AL450226.2-201ENST00000622913 439 ntBASIC3.53□□□□□ -1.84
APOBP04114 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
APOBP04114 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
APOBP04114 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
APOBP04114 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC3.53□□□□□ -1.84
APOBP04114 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
APOBP04114 MFSD8-239ENST00000641590 2479 ntBASIC3.53□□□□□ -1.84
APOBP04114 RGMA-201ENST00000329082 11350 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.85
APOBP04114 AC122718.1-201ENST00000439448 744 ntBASIC3.53□□□□□ -1.85
APOBP04114 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC3.53□□□□□ -1.85
APOBP04114 AC073264.2-201ENST00000448886 166 ntBASIC3.53□□□□□ -1.85
APOBP04114 FAM133DP-201ENST00000464802 691 ntBASIC3.53□□□□□ -1.85
APOBP04114 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC3.53□□□□□ -1.85
APOBP04114 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC3.53□□□□□ -1.85
APOBP04114 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC3.53□□□□□ -1.85
APOBP04114 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC3.52□□□□□ -1.85
APOBP04114 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
APOBP04114 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC3.52□□□□□ -1.85
APOBP04114 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC3.52□□□□□ -1.85
APOBP04114 PBRM1-208ENST00000410007 4905 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
APOBP04114 AC132825.1-201ENST00000463573 2247 ntBASIC3.52□□□□□ -1.85
APOBP04114 BCOR-205ENST00000397354 6258 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
APOBP04114 GNAS-202ENST00000306090 477 ntTSL 5 BASIC3.52□□□□□ -1.85
APOBP04114 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC3.52□□□□□ -1.85
APOBP04114 RN7SKP27-201ENST00000410684 333 ntBASIC3.52□□□□□ -1.85
APOBP04114 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC3.52□□□□□ -1.85
APOBP04114 AC092570.3-201ENST00000420113 693 ntBASIC3.52□□□□□ -1.85
APOBP04114 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC3.52□□□□□ -1.85
APOBP04114 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC3.52□□□□□ -1.85
APOBP04114 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC3.52□□□□□ -1.85
APOBP04114 RN7SL447P-201ENST00000494711 245 ntBASIC3.52□□□□□ -1.85
APOBP04114 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC3.52□□□□□ -1.85
APOBP04114 AP001521.2-201ENST00000608772 546 ntBASIC3.52□□□□□ -1.85
APOBP04114 FYCO1-201ENST00000296137 8504 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
APOBP04114 ST3GAL1-207ENST00000521180 6951 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
APOBP04114 NSD2-205ENST00000382892 7706 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
APOBP04114 KLC1-204ENST00000348520 15091 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
APOBP04114 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
APOBP04114 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC3.52□□□□□ -1.85
APOBP04114 SRCAP-202ENST00000395059 9126 ntTSL 2 BASIC3.52□□□□□ -1.85
APOBP04114 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC3.52□□□□□ -1.85
APOBP04114 PANDAR-201ENST00000629595 1506 ntBASIC3.52□□□□□ -1.85
APOBP04114 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC3.52□□□□□ -1.85
APOBP04114 AC131649.2-201ENST00000624925 4439 ntBASIC3.52□□□□□ -1.85
APOBP04114 HSPA8P14-201ENST00000552265 1805 ntBASIC3.52□□□□□ -1.85
APOBP04114 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC3.52□□□□□ -1.85
APOBP04114 ABLIM1-206ENST00000392952 6841 ntTSL 5 BASIC3.52□□□□□ -1.85
APOBP04114 AC234779.1-201ENST00000425910 285 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms