Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
VTNP04004 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
VTNP04004 AC018765.1-201ENST00000623357 3446 ntBASIC6.57□□□□□ -1.36
VTNP04004 RNA5SP242-201ENST00000364171 118 ntBASIC6.57□□□□□ -1.36
VTNP04004 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC6.57□□□□□ -1.36
VTNP04004 RNA5SP178-201ENST00000410380 128 ntBASIC6.57□□□□□ -1.36
VTNP04004 RNU6-233P-201ENST00000410845 141 ntBASIC6.57□□□□□ -1.36
VTNP04004 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC6.57□□□□□ -1.36
VTNP04004 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC6.57□□□□□ -1.36
VTNP04004 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC6.57□□□□□ -1.36
VTNP04004 BX119321.1-201ENST00000428912 797 ntBASIC6.57□□□□□ -1.36
VTNP04004 AC126120.1-201ENST00000431082 470 ntBASIC6.57□□□□□ -1.36
VTNP04004 AL445928.1-201ENST00000435545 222 ntBASIC6.57□□□□□ -1.36
VTNP04004 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
VTNP04004 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.57□□□□□ -1.36
VTNP04004 AC112191.2-201ENST00000522428 333 ntBASIC6.57□□□□□ -1.36
VTNP04004 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC6.57□□□□□ -1.36
VTNP04004 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC6.57□□□□□ -1.36
VTNP04004 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.57□□□□□ -1.36
VTNP04004 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.57□□□□□ -1.36
VTNP04004 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
VTNP04004 AC137695.1-201ENST00000604126 489 ntBASIC6.57□□□□□ -1.36
VTNP04004 RN7SL787P-201ENST00000613000 284 ntBASIC6.57□□□□□ -1.36
VTNP04004 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
VTNP04004 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC6.57□□□□□ -1.36
VTNP04004 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.57□□□□□ -1.36
VTNP04004 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
VTNP04004 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
VTNP04004 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
VTNP04004 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.57□□□□□ -1.36
VTNP04004 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
VTNP04004 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
VTNP04004 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.57□□□□□ -1.36
VTNP04004 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
VTNP04004 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC6.57□□□□□ -1.36
VTNP04004 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC6.57□□□□□ -1.36
VTNP04004 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.57□□□□□ -1.36
VTNP04004 PDZK1P1-202ENST00000425209 1350 ntBASIC6.57□□□□□ -1.36
VTNP04004 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
VTNP04004 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
VTNP04004 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.56□□□□□ -1.36
VTNP04004 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
VTNP04004 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.56□□□□□ -1.36
VTNP04004 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
VTNP04004 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
VTNP04004 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
VTNP04004 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
VTNP04004 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
VTNP04004 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.56□□□□□ -1.36
VTNP04004 SNORA51.1-201ENST00000363243 140 ntBASIC6.56□□□□□ -1.36
VTNP04004 AC005522.1-201ENST00000395416 346 ntBASIC6.56□□□□□ -1.36
VTNP04004 AC016739.1-201ENST00000405359 345 ntBASIC6.56□□□□□ -1.36
VTNP04004 RPL36P18-201ENST00000419316 318 ntBASIC6.56□□□□□ -1.36
VTNP04004 AC007562.1-201ENST00000421819 517 ntBASIC6.56□□□□□ -1.36
VTNP04004 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
VTNP04004 RPL12P16-201ENST00000431098 498 ntBASIC6.56□□□□□ -1.36
VTNP04004 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC6.56□□□□□ -1.36
VTNP04004 SUMO2P3-201ENST00000438311 288 ntBASIC6.56□□□□□ -1.36
VTNP04004 AC064862.4-201ENST00000442180 334 ntBASIC6.56□□□□□ -1.36
VTNP04004 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.56□□□□□ -1.36
VTNP04004 AC023274.2-201ENST00000445264 521 ntBASIC6.56□□□□□ -1.36
VTNP04004 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
VTNP04004 USP9YP2-201ENST00000504503 1000 ntBASIC6.56□□□□□ -1.36
VTNP04004 AC096754.1-201ENST00000508904 818 ntBASIC6.56□□□□□ -1.36
VTNP04004 USP9YP1-201ENST00000513521 1002 ntBASIC6.56□□□□□ -1.36
VTNP04004 RN7SKP98-201ENST00000517070 156 ntBASIC6.56□□□□□ -1.36
VTNP04004 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
VTNP04004 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC6.56□□□□□ -1.36
VTNP04004 IGLV3-30-201ENST00000524362 298 ntBASIC6.56□□□□□ -1.36
VTNP04004 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.56□□□□□ -1.36
VTNP04004 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC6.56□□□□□ -1.36
VTNP04004 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
VTNP04004 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
VTNP04004 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC6.56□□□□□ -1.36
VTNP04004 AL049840.6-201ENST00000604583 345 ntBASIC6.56□□□□□ -1.36
VTNP04004 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC6.56□□□□□ -1.36
VTNP04004 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC6.56□□□□□ -1.36
VTNP04004 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC6.56□□□□□ -1.36
VTNP04004 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
VTNP04004 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.56□□□□□ -1.36
VTNP04004 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
VTNP04004 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
VTNP04004 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
VTNP04004 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
VTNP04004 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
VTNP04004 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
VTNP04004 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
VTNP04004 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
VTNP04004 AC010329.1-201ENST00000593903 8328 ntBASIC6.56□□□□□ -1.36
VTNP04004 AC016583.1-201ENST00000624221 2431 ntBASIC6.56□□□□□ -1.36
VTNP04004 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.56□□□□□ -1.36
VTNP04004 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
VTNP04004 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
VTNP04004 AC005034.3-201ENST00000604845 1747 ntBASIC6.56□□□□□ -1.36
VTNP04004 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
VTNP04004 SHQ1P1-201ENST00000437111 1544 ntBASIC6.55□□□□□ -1.36
VTNP04004 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
VTNP04004 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
VTNP04004 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
VTNP04004 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms