Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC5.74□□□□□ -1.49
NKX2-2O95096 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
NKX2-2O95096 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC5.74□□□□□ -1.49
NKX2-2O95096 DMD-205ENST00000359836 7339 ntTSL 5 BASIC5.74□□□□□ -1.49
NKX2-2O95096 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC5.74□□□□□ -1.49
NKX2-2O95096 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NKX2-2O95096 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NKX2-2O95096 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NKX2-2O95096 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NKX2-2O95096 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
NKX2-2O95096 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC5.74□□□□□ -1.49
NKX2-2O95096 RNU4-39P-201ENST00000362455 127 ntBASIC5.74□□□□□ -1.49
NKX2-2O95096 SNORA27.3-201ENST00000364937 134 ntBASIC5.74□□□□□ -1.49
NKX2-2O95096 AL451046.1-201ENST00000406097 534 ntBASIC5.74□□□□□ -1.49
NKX2-2O95096 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.74□□□□□ -1.49
NKX2-2O95096 RN7SKP151-201ENST00000410230 316 ntBASIC5.74□□□□□ -1.49
NKX2-2O95096 RNU2-72P-201ENST00000411175 163 ntBASIC5.74□□□□□ -1.49
NKX2-2O95096 ALDH7A1P4-201ENST00000412255 178 ntBASIC5.74□□□□□ -1.49
NKX2-2O95096 CDY17P-201ENST00000414121 1282 ntBASIC5.74□□□□□ -1.49
NKX2-2O95096 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.74□□□□□ -1.49
NKX2-2O95096 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.74□□□□□ -1.49
NKX2-2O95096 RPL7AP51-201ENST00000422016 760 ntBASIC5.74□□□□□ -1.49
NKX2-2O95096 CDY8P-201ENST00000428380 1279 ntBASIC5.74□□□□□ -1.49
NKX2-2O95096 BMP6P1-201ENST00000431230 679 ntBASIC5.74□□□□□ -1.49
NKX2-2O95096 AC013403.1-201ENST00000436954 263 ntBASIC5.74□□□□□ -1.49
NKX2-2O95096 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC5.74□□□□□ -1.49
NKX2-2O95096 AL645936.1-201ENST00000441979 518 ntBASIC5.74□□□□□ -1.49
NKX2-2O95096 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.74□□□□□ -1.49
NKX2-2O95096 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.74□□□□□ -1.49
NKX2-2O95096 CDY20P-201ENST00000447528 1279 ntBASIC5.74□□□□□ -1.49
NKX2-2O95096 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.74□□□□□ -1.49
NKX2-2O95096 AC112187.1-201ENST00000455837 479 ntBASIC5.74□□□□□ -1.49
NKX2-2O95096 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC5.74□□□□□ -1.49
NKX2-2O95096 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.74□□□□□ -1.49
NKX2-2O95096 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC5.74□□□□□ -1.49
NKX2-2O95096 AC114728.1-201ENST00000488289 483 ntBASIC5.74□□□□□ -1.49
NKX2-2O95096 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC5.74□□□□□ -1.49
NKX2-2O95096 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC5.74□□□□□ -1.49
NKX2-2O95096 CYP4F27P-201ENST00000514557 494 ntBASIC5.74□□□□□ -1.49
NKX2-2O95096 Y_RNA.710-201ENST00000516975 110 ntBASIC5.74□□□□□ -1.49
NKX2-2O95096 AC036111.2-201ENST00000533247 901 ntBASIC5.74□□□□□ -1.49
NKX2-2O95096 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC5.74□□□□□ -1.49
NKX2-2O95096 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.74□□□□□ -1.49
NKX2-2O95096 AC092865.1-201ENST00000544395 1023 ntBASIC5.74□□□□□ -1.49
NKX2-2O95096 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.74□□□□□ -1.49
NKX2-2O95096 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.74□□□□□ -1.49
NKX2-2O95096 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.74□□□□□ -1.49
NKX2-2O95096 AC020916.2-201ENST00000591242 360 ntBASIC5.74□□□□□ -1.49
NKX2-2O95096 AC092474.3-201ENST00000603022 568 ntBASIC5.74□□□□□ -1.49
NKX2-2O95096 AC027334.1-201ENST00000603257 310 ntBASIC5.74□□□□□ -1.49
NKX2-2O95096 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.74□□□□□ -1.49
NKX2-2O95096 AL137067.2-201ENST00000621202 131 ntBASIC5.74□□□□□ -1.49
NKX2-2O95096 AL162377.2-201ENST00000624532 337 ntBASIC5.74□□□□□ -1.49
NKX2-2O95096 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.74□□□□□ -1.49
NKX2-2O95096 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NKX2-2O95096 HSPD1P8-201ENST00000400121 1658 ntBASIC5.74□□□□□ -1.49
NKX2-2O95096 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NKX2-2O95096 TMCC1P1-201ENST00000518897 1980 ntBASIC5.74□□□□□ -1.49
NKX2-2O95096 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
NKX2-2O95096 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
NKX2-2O95096 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NKX2-2O95096 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
NKX2-2O95096 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
NKX2-2O95096 AC011416.1-201ENST00000514947 1732 ntBASIC5.74□□□□□ -1.49
NKX2-2O95096 AC012078.1-201ENST00000405035 1646 ntBASIC5.74□□□□□ -1.49
NKX2-2O95096 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC5.74□□□□□ -1.49
NKX2-2O95096 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
NKX2-2O95096 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC5.73□□□□□ -1.49
NKX2-2O95096 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.73□□□□□ -1.49
NKX2-2O95096 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.73□□□□□ -1.49
NKX2-2O95096 SNORA40.4-201ENST00000390971 128 ntBASIC5.73□□□□□ -1.49
NKX2-2O95096 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC5.73□□□□□ -1.49
NKX2-2O95096 AL354707.3-201ENST00000427308 331 ntBASIC5.73□□□□□ -1.49
NKX2-2O95096 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC5.73□□□□□ -1.49
NKX2-2O95096 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC5.73□□□□□ -1.49
NKX2-2O95096 AC007383.1-201ENST00000445875 636 ntBASIC5.73□□□□□ -1.49
NKX2-2O95096 AC097359.1-201ENST00000447946 463 ntBASIC5.73□□□□□ -1.49
NKX2-2O95096 MTND6P5-201ENST00000448266 512 ntBASIC5.73□□□□□ -1.49
NKX2-2O95096 RN7SL552P-201ENST00000462094 276 ntBASIC5.73□□□□□ -1.49
NKX2-2O95096 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.73□□□□□ -1.49
NKX2-2O95096 RPL34P33-201ENST00000486062 334 ntBASIC5.73□□□□□ -1.49
NKX2-2O95096 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.73□□□□□ -1.49
NKX2-2O95096 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.73□□□□□ -1.49
NKX2-2O95096 AC108157.1-201ENST00000510511 539 ntBASIC5.73□□□□□ -1.49
NKX2-2O95096 AC090958.1-201ENST00000511122 351 ntBASIC5.73□□□□□ -1.49
NKX2-2O95096 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
NKX2-2O95096 AC116917.1-201ENST00000520558 305 ntBASIC5.73□□□□□ -1.49
NKX2-2O95096 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC5.73□□□□□ -1.49
NKX2-2O95096 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NKX2-2O95096 BTG1P1-201ENST00000540396 508 ntBASIC5.73□□□□□ -1.49
NKX2-2O95096 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NKX2-2O95096 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.73□□□□□ -1.49
NKX2-2O95096 DPPA3P2-201ENST00000553589 478 ntBASIC5.73□□□□□ -1.49
NKX2-2O95096 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC5.73□□□□□ -1.49
NKX2-2O95096 LINC00557-201ENST00000563184 1279 ntBASIC5.73□□□□□ -1.49
NKX2-2O95096 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
NKX2-2O95096 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.73□□□□□ -1.49
NKX2-2O95096 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.73□□□□□ -1.49
NKX2-2O95096 ADAD1P2-201ENST00000588476 646 ntBASIC5.73□□□□□ -1.49
NKX2-2O95096 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms