Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.71□□□□□ -1.5
SCN2BO60939 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.71□□□□□ -1.5
SCN2BO60939 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
SCN2BO60939 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC5.71□□□□□ -1.5
SCN2BO60939 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.71□□□□□ -1.5
SCN2BO60939 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SCN2BO60939 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.5
SCN2BO60939 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.71□□□□□ -1.5
SCN2BO60939 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SCN2BO60939 KYNUP3-201ENST00000574386 1341 ntBASIC5.71□□□□□ -1.5
SCN2BO60939 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SCN2BO60939 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SCN2BO60939 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SCN2BO60939 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.71□□□□□ -1.5
SCN2BO60939 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.7□□□□□ -1.5
SCN2BO60939 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SCN2BO60939 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SCN2BO60939 AL355834.1-201ENST00000556602 3965 ntBASIC5.7□□□□□ -1.5
SCN2BO60939 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SCN2BO60939 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.7□□□□□ -1.5
SCN2BO60939 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
SCN2BO60939 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
SCN2BO60939 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.7□□□□□ -1.5
SCN2BO60939 RNA5SP110-201ENST00000362638 115 ntBASIC5.7□□□□□ -1.5
SCN2BO60939 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SCN2BO60939 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
SCN2BO60939 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
SCN2BO60939 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.7□□□□□ -1.5
SCN2BO60939 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC5.7□□□□□ -1.5
SCN2BO60939 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC5.7□□□□□ -1.5
SCN2BO60939 OR3D1P-201ENST00000438288 955 ntBASIC5.7□□□□□ -1.5
SCN2BO60939 RPL12P49-201ENST00000441100 121 ntBASIC5.7□□□□□ -1.5
SCN2BO60939 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.7□□□□□ -1.5
SCN2BO60939 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.7□□□□□ -1.5
SCN2BO60939 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.7□□□□□ -1.5
SCN2BO60939 GOLGA5P1-201ENST00000507317 980 ntBASIC5.7□□□□□ -1.5
SCN2BO60939 HMGN1P16-201ENST00000508308 283 ntBASIC5.7□□□□□ -1.5
SCN2BO60939 AC138517.1-201ENST00000515724 568 ntBASIC5.7□□□□□ -1.5
SCN2BO60939 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
SCN2BO60939 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.7□□□□□ -1.5
SCN2BO60939 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.7□□□□□ -1.5
SCN2BO60939 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SCN2BO60939 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.7□□□□□ -1.5
SCN2BO60939 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SCN2BO60939 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
SCN2BO60939 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC5.7□□□□□ -1.5
SCN2BO60939 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC5.7□□□□□ -1.5
SCN2BO60939 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.7□□□□□ -1.5
SCN2BO60939 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.7□□□□□ -1.5
SCN2BO60939 SMIM12P1-201ENST00000603004 274 ntBASIC5.7□□□□□ -1.5
SCN2BO60939 AL080312.2-201ENST00000613001 630 ntBASIC5.7□□□□□ -1.5
SCN2BO60939 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.7□□□□□ -1.5
SCN2BO60939 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
SCN2BO60939 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC5.7□□□□□ -1.5
SCN2BO60939 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SCN2BO60939 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
SCN2BO60939 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
SCN2BO60939 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
SCN2BO60939 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SCN2BO60939 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC5.7□□□□□ -1.5
SCN2BO60939 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SCN2BO60939 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
SCN2BO60939 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SCN2BO60939 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SCN2BO60939 AP000432.2-201ENST00000624164 2048 ntBASIC5.69□□□□□ -1.5
SCN2BO60939 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.69□□□□□ -1.5
SCN2BO60939 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SCN2BO60939 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SCN2BO60939 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SCN2BO60939 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SCN2BO60939 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SCN2BO60939 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
SCN2BO60939 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
SCN2BO60939 RN7SKP17-201ENST00000411242 351 ntBASIC5.69□□□□□ -1.5
SCN2BO60939 ZNF619P1-201ENST00000446539 752 ntBASIC5.69□□□□□ -1.5
SCN2BO60939 AC099670.1-201ENST00000455141 783 ntBASIC5.69□□□□□ -1.5
SCN2BO60939 ACA64.4-201ENST00000459070 127 ntBASIC5.69□□□□□ -1.5
SCN2BO60939 AC004890.1-201ENST00000461005 181 ntBASIC5.69□□□□□ -1.5
SCN2BO60939 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.69□□□□□ -1.5
SCN2BO60939 SNRPCP11-201ENST00000492453 205 ntBASIC5.69□□□□□ -1.5
SCN2BO60939 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SCN2BO60939 ZNF519P4-201ENST00000514008 125 ntBASIC5.69□□□□□ -1.5
SCN2BO60939 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.69□□□□□ -1.5
SCN2BO60939 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC5.69□□□□□ -1.5
SCN2BO60939 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.69□□□□□ -1.5
SCN2BO60939 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.69□□□□□ -1.5
SCN2BO60939 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC5.69□□□□□ -1.5
SCN2BO60939 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.69□□□□□ -1.5
SCN2BO60939 MIR4701-201ENST00000583094 63 ntBASIC5.69□□□□□ -1.5
SCN2BO60939 WBP1LP11-201ENST00000586141 328 ntBASIC5.69□□□□□ -1.5
SCN2BO60939 AC006115.2-201ENST00000596823 202 ntBASIC5.69□□□□□ -1.5
SCN2BO60939 AC005479.3-201ENST00000602790 431 ntBASIC5.69□□□□□ -1.5
SCN2BO60939 AC011891.2-201ENST00000604949 397 ntBASIC5.69□□□□□ -1.5
SCN2BO60939 NQO2-209ENST00000606474 470 ntTSL 3 BASIC5.69□□□□□ -1.5
SCN2BO60939 AC099654.15-201ENST00000639802 509 ntBASIC5.69□□□□□ -1.5
SCN2BO60939 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.69□□□□□ -1.5
SCN2BO60939 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
SCN2BO60939 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
SCN2BO60939 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.69□□□□□ -1.5
SCN2BO60939 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 130.9 ms