Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC5.83□□□□□ -1.48
SNX3O60493 AC025857.1-201ENST00000525252 377 ntBASIC5.83□□□□□ -1.48
SNX3O60493 AP003119.2-201ENST00000528075 336 ntTSL 3 BASIC5.83□□□□□ -1.48
SNX3O60493 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.83□□□□□ -1.48
SNX3O60493 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC5.83□□□□□ -1.48
SNX3O60493 AC135626.1-201ENST00000556983 435 ntBASIC5.83□□□□□ -1.48
SNX3O60493 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.83□□□□□ -1.48
SNX3O60493 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.83□□□□□ -1.48
SNX3O60493 MIR4312-201ENST00000579909 76 ntBASIC5.83□□□□□ -1.48
SNX3O60493 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC5.83□□□□□ -1.48
SNX3O60493 AC018809.2-201ENST00000602436 3823 ntBASIC5.83□□□□□ -1.48
SNX3O60493 AC090953.1-201ENST00000604305 1092 ntBASIC5.83□□□□□ -1.48
SNX3O60493 AC092944.2-201ENST00000605443 889 ntBASIC5.83□□□□□ -1.48
SNX3O60493 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.83□□□□□ -1.48
SNX3O60493 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.83□□□□□ -1.48
SNX3O60493 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.83□□□□□ -1.48
SNX3O60493 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
SNX3O60493 MFSD8-239ENST00000641590 2479 ntBASIC5.83□□□□□ -1.48
SNX3O60493 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC5.83□□□□□ -1.48
SNX3O60493 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
SNX3O60493 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SNX3O60493 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.82□□□□□ -1.48
SNX3O60493 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.82□□□□□ -1.48
SNX3O60493 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SNX3O60493 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SNX3O60493 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.82□□□□□ -1.48
SNX3O60493 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.82□□□□□ -1.48
SNX3O60493 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.82□□□□□ -1.48
SNX3O60493 TCP11X1-202ENST00000622971 1372 ntBASIC5.82□□□□□ -1.48
SNX3O60493 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SNX3O60493 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.82□□□□□ -1.48
SNX3O60493 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SNX3O60493 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SNX3O60493 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SNX3O60493 RN7SKP78-201ENST00000364711 318 ntBASIC5.82□□□□□ -1.48
SNX3O60493 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
SNX3O60493 HHLA3-203ENST00000370940 775 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
SNX3O60493 HOPX-204ENST00000381260 1141 ntTSL 3 BASIC5.82□□□□□ -1.48
SNX3O60493 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.82□□□□□ -1.48
SNX3O60493 RNGTTP1-201ENST00000420965 728 ntBASIC5.82□□□□□ -1.48
SNX3O60493 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC5.82□□□□□ -1.48
SNX3O60493 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.82□□□□□ -1.48
SNX3O60493 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.82□□□□□ -1.48
SNX3O60493 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.82□□□□□ -1.48
SNX3O60493 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC5.82□□□□□ -1.48
SNX3O60493 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.82□□□□□ -1.48
SNX3O60493 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.82□□□□□ -1.48
SNX3O60493 CBX1P2-201ENST00000453841 458 ntBASIC5.82□□□□□ -1.48
SNX3O60493 AKR1D1P1-201ENST00000457236 936 ntBASIC5.82□□□□□ -1.48
SNX3O60493 RN7SKP198-201ENST00000459286 306 ntBASIC5.82□□□□□ -1.48
SNX3O60493 AC006539.1-201ENST00000481419 501 ntBASIC5.82□□□□□ -1.48
SNX3O60493 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC5.82□□□□□ -1.48
SNX3O60493 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.82□□□□□ -1.48
SNX3O60493 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC5.82□□□□□ -1.48
SNX3O60493 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC5.82□□□□□ -1.48
SNX3O60493 RNA5SP418-201ENST00000515951 117 ntBASIC5.82□□□□□ -1.48
SNX3O60493 MIR2117-201ENST00000516780 80 ntBASIC5.82□□□□□ -1.48
SNX3O60493 RN7SKP5-201ENST00000517045 272 ntBASIC5.82□□□□□ -1.48
SNX3O60493 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC5.82□□□□□ -1.48
SNX3O60493 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.82□□□□□ -1.48
SNX3O60493 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC5.82□□□□□ -1.48
SNX3O60493 AP005131.5-201ENST00000585817 498 ntTSL 3 BASIC5.82□□□□□ -1.48
SNX3O60493 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.82□□□□□ -1.48
SNX3O60493 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC5.82□□□□□ -1.48
SNX3O60493 SNORA74.4-201ENST00000607595 199 ntBASIC5.82□□□□□ -1.48
SNX3O60493 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC5.82□□□□□ -1.48
SNX3O60493 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
SNX3O60493 AC021766.1-201ENST00000624404 741 ntBASIC5.82□□□□□ -1.48
SNX3O60493 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.82□□□□□ -1.48
SNX3O60493 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.82□□□□□ -1.48
SNX3O60493 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SNX3O60493 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SNX3O60493 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
SNX3O60493 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SNX3O60493 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
SNX3O60493 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SNX3O60493 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SNX3O60493 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
SNX3O60493 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
SNX3O60493 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.81□□□□□ -1.48
SNX3O60493 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SNX3O60493 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
SNX3O60493 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SNX3O60493 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SNX3O60493 AC020656.2-201ENST00000613291 5309 ntBASIC5.81□□□□□ -1.48
SNX3O60493 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SNX3O60493 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SNX3O60493 OR10R3P-201ENST00000361688 942 ntBASIC5.81□□□□□ -1.48
SNX3O60493 U3.7-201ENST00000363668 216 ntBASIC5.81□□□□□ -1.48
SNX3O60493 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SNX3O60493 ZNF736P10Y-201ENST00000403990 1110 ntBASIC5.81□□□□□ -1.48
SNX3O60493 AL133482.1-201ENST00000415988 498 ntBASIC5.81□□□□□ -1.48
SNX3O60493 HYALP1-201ENST00000417674 1279 ntBASIC5.81□□□□□ -1.48
SNX3O60493 OR10T1P-201ENST00000424327 947 ntBASIC5.81□□□□□ -1.48
SNX3O60493 AL589794.1-201ENST00000424971 390 ntBASIC5.81□□□□□ -1.48
SNX3O60493 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.81□□□□□ -1.48
SNX3O60493 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC5.81□□□□□ -1.48
SNX3O60493 GAPDHP14-201ENST00000450472 937 ntBASIC5.81□□□□□ -1.48
SNX3O60493 FCF1P7-201ENST00000451185 558 ntBASIC5.81□□□□□ -1.48
SNX3O60493 AC139769.1-201ENST00000471224 1001 ntTSL 3 BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms