Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC7.55□□□□□ -1.2
SOX1O00570 AC087752.2-201ENST00000521219 281 ntBASIC7.55□□□□□ -1.2
SOX1O00570 OR5F2P-201ENST00000532761 941 ntBASIC7.55□□□□□ -1.2
SOX1O00570 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC7.55□□□□□ -1.2
SOX1O00570 AC079598.4-201ENST00000549647 265 ntBASIC7.55□□□□□ -1.2
SOX1O00570 BLZF2P-201ENST00000553776 1130 ntBASIC7.55□□□□□ -1.2
SOX1O00570 TIMM9-205ENST00000555404 430 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SOX1O00570 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC7.55□□□□□ -1.2
SOX1O00570 AC105275.2-201ENST00000567907 711 ntBASIC7.55□□□□□ -1.2
SOX1O00570 OR7E18P-201ENST00000592589 702 ntBASIC7.55□□□□□ -1.2
SOX1O00570 IGKV1OR2-9-201ENST00000603957 287 ntBASIC7.55□□□□□ -1.2
SOX1O00570 IGKV1OR2-11-201ENST00000604120 287 ntBASIC7.55□□□□□ -1.2
SOX1O00570 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC7.55□□□□□ -1.2
SOX1O00570 AC069499.2-201ENST00000610665 382 ntBASIC7.55□□□□□ -1.2
SOX1O00570 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC7.55□□□□□ -1.2
SOX1O00570 MIR6730-201ENST00000622213 67 ntBASIC7.55□□□□□ -1.2
SOX1O00570 AL356266.1-201ENST00000623311 483 ntBASIC7.55□□□□□ -1.2
SOX1O00570 AC124312.6-202ENST00000623624 418 ntBASIC7.55□□□□□ -1.2
SOX1O00570 OR1S1-201ENST00000624470 978 ntBASIC7.55□□□□□ -1.2
SOX1O00570 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SOX1O00570 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
SOX1O00570 PPARGC1A-206ENST00000507380 2385 ntTSL 2 BASIC7.55□□□□□ -1.2
SOX1O00570 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
SOX1O00570 NELL2-217ENST00000551601 3148 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SOX1O00570 A2ML1-205ENST00000539547 3460 ntTSL 2 BASIC7.55□□□□□ -1.2
SOX1O00570 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC7.55□□□□□ -1.2
SOX1O00570 KIT-201ENST00000288135 5186 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
SOX1O00570 ETS1-202ENST00000392668 5139 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SOX1O00570 CTNNA1-210ENST00000518825 3536 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SOX1O00570 LGSN-202ENST00000370658 5213 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
SOX1O00570 AC105046.1-201ENST00000566457 4997 ntBASIC7.54□□□□□ -1.2
SOX1O00570 AC091305.2-201ENST00000624049 1576 ntBASIC7.54□□□□□ -1.2
SOX1O00570 AC092999.1-201ENST00000624004 1924 ntBASIC7.54□□□□□ -1.2
SOX1O00570 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
SOX1O00570 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC7.54□□□□□ -1.2
SOX1O00570 CR381670.1-201ENST00000624291 1693 ntBASIC7.54□□□□□ -1.2
SOX1O00570 AKAP3-201ENST00000228850 3339 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
SOX1O00570 AC073429.2-201ENST00000569694 1444 ntBASIC7.54□□□□□ -1.2
SOX1O00570 NRG3-206ENST00000545131 2713 ntTSL 5 BASIC7.54□□□□□ -1.2
SOX1O00570 ARPP21-221ENST00000444190 3182 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SOX1O00570 EPYC-201ENST00000261172 1539 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
SOX1O00570 MT-CO1-201ENST00000361624 1542 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
SOX1O00570 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SOX1O00570 AC102941.1-201ENST00000567616 1537 ntBASIC7.54□□□□□ -1.2
SOX1O00570 AP003471.1-202ENST00000319051 1988 ntBASIC7.54□□□□□ -1.2
SOX1O00570 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
SOX1O00570 CCRL2-204ENST00000400882 1642 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
SOX1O00570 FUNDC2P3-201ENST00000334716 533 ntBASIC7.54□□□□□ -1.2
SOX1O00570 RNU6-694P-201ENST00000364071 147 ntBASIC7.54□□□□□ -1.2
SOX1O00570 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
SOX1O00570 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SOX1O00570 SNORA70G-201ENST00000383923 142 ntBASIC7.54□□□□□ -1.2
SOX1O00570 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
SOX1O00570 RSL24D1P4-201ENST00000400938 484 ntBASIC7.54□□□□□ -1.2
SOX1O00570 MTCO1P56-201ENST00000401674 224 ntBASIC7.54□□□□□ -1.2
SOX1O00570 RN7SKP273-201ENST00000411392 314 ntBASIC7.54□□□□□ -1.2
SOX1O00570 AC105402.1-201ENST00000413336 545 ntBASIC7.54□□□□□ -1.2
SOX1O00570 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC7.54□□□□□ -1.2
SOX1O00570 AL022331.1-201ENST00000429025 477 ntBASIC7.54□□□□□ -1.2
SOX1O00570 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC7.54□□□□□ -1.2
SOX1O00570 HMGB2-202ENST00000438704 1032 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
SOX1O00570 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SOX1O00570 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC7.54□□□□□ -1.2
SOX1O00570 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC7.54□□□□□ -1.2
SOX1O00570 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC7.54□□□□□ -1.2
SOX1O00570 CCNB1IP1P3-201ENST00000454702 829 ntBASIC7.54□□□□□ -1.2
SOX1O00570 AL390026.1-201ENST00000456647 457 ntBASIC7.54□□□□□ -1.2
SOX1O00570 RPS26P11-201ENST00000463445 348 ntBASIC7.54□□□□□ -1.2
SOX1O00570 RPS26P6-201ENST00000475156 348 ntBASIC7.54□□□□□ -1.2
SOX1O00570 AC022336.1-201ENST00000475510 337 ntBASIC7.54□□□□□ -1.2
SOX1O00570 RPL7P40-201ENST00000481703 745 ntBASIC7.54□□□□□ -1.2
SOX1O00570 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC7.54□□□□□ -1.2
SOX1O00570 AC006499.4-201ENST00000510947 694 ntBASIC7.54□□□□□ -1.2
SOX1O00570 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC7.54□□□□□ -1.2
SOX1O00570 AC027544.3-201ENST00000535082 757 ntBASIC7.54□□□□□ -1.2
SOX1O00570 AL445383.1-201ENST00000554689 874 ntBASIC7.54□□□□□ -1.2
SOX1O00570 AL049830.4-201ENST00000555149 351 ntBASIC7.54□□□□□ -1.2
SOX1O00570 AC002519.2-203ENST00000567043 837 ntBASIC7.54□□□□□ -1.2
SOX1O00570 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC7.54□□□□□ -1.2
SOX1O00570 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC7.54□□□□□ -1.2
SOX1O00570 SLC14A1-214ENST00000589700 1022 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SOX1O00570 PRR13P5-201ENST00000596581 442 ntBASIC7.54□□□□□ -1.2
SOX1O00570 AC073544.2-201ENST00000601155 540 ntBASIC7.54□□□□□ -1.2
SOX1O00570 AP002906.1-201ENST00000603405 233 ntBASIC7.54□□□□□ -1.2
SOX1O00570 AC100767.2-201ENST00000604840 693 ntBASIC7.54□□□□□ -1.2
SOX1O00570 AL353621.2-201ENST00000605340 133 ntBASIC7.54□□□□□ -1.2
SOX1O00570 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC7.54□□□□□ -1.2
SOX1O00570 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC7.54□□□□□ -1.2
SOX1O00570 AL162574.1-201ENST00000615702 950 ntBASIC7.54□□□□□ -1.2
SOX1O00570 MIAT_exon5_1.1-201ENST00000618919 149 ntBASIC7.54□□□□□ -1.2
SOX1O00570 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC7.54□□□□□ -1.2
SOX1O00570 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC7.54□□□□□ -1.2
SOX1O00570 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC7.54□□□□□ -1.2
SOX1O00570 AC019080.5-201ENST00000624891 757 ntBASIC7.54□□□□□ -1.2
SOX1O00570 AC244258.1-201ENST00000637553 1071 ntBASIC7.54□□□□□ -1.2
SOX1O00570 ABCB4-203ENST00000359206 3923 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
SOX1O00570 PHF21A-201ENST00000323180 3675 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
SOX1O00570 OR14J1-203ENST00000641895 6443 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
SOX1O00570 PPARA-203ENST00000407236 9995 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
SOX1O00570 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms