Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC4.8□□□□□ -1.64
UPK2O00526 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC4.8□□□□□ -1.64
UPK2O00526 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC4.8□□□□□ -1.64
UPK2O00526 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
UPK2O00526 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC4.8□□□□□ -1.64
UPK2O00526 AC119674.1-202ENST00000641333 1860 ntBASIC4.8□□□□□ -1.64
UPK2O00526 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
UPK2O00526 AC130360.2-201ENST00000533477 1556 ntBASIC4.8□□□□□ -1.64
UPK2O00526 AL132656.3-201ENST00000606384 1595 ntBASIC4.8□□□□□ -1.64
UPK2O00526 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC4.8□□□□□ -1.64
UPK2O00526 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
UPK2O00526 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
UPK2O00526 SNORA21-201ENST00000362423 132 ntBASIC4.8□□□□□ -1.64
UPK2O00526 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
UPK2O00526 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
UPK2O00526 AL132875.1-201ENST00000403623 949 ntBASIC4.8□□□□□ -1.64
UPK2O00526 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC4.8□□□□□ -1.64
UPK2O00526 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
UPK2O00526 NMD3P2-201ENST00000421815 761 ntBASIC4.8□□□□□ -1.64
UPK2O00526 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC4.8□□□□□ -1.64
UPK2O00526 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC4.8□□□□□ -1.64
UPK2O00526 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC4.8□□□□□ -1.64
UPK2O00526 UBQLN1P1-207ENST00000441056 1169 ntBASIC4.8□□□□□ -1.64
UPK2O00526 RSU1P1-201ENST00000453416 441 ntBASIC4.8□□□□□ -1.64
UPK2O00526 AC104164.1-201ENST00000460282 590 ntBASIC4.8□□□□□ -1.64
UPK2O00526 AL603882.1-201ENST00000463059 681 ntBASIC4.8□□□□□ -1.64
UPK2O00526 RPS7P10-201ENST00000464254 603 ntBASIC4.8□□□□□ -1.64
UPK2O00526 H3F3AP5-201ENST00000475267 429 ntBASIC4.8□□□□□ -1.64
UPK2O00526 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC4.8□□□□□ -1.64
UPK2O00526 ST13P12-201ENST00000508958 1094 ntBASIC4.8□□□□□ -1.64
UPK2O00526 AC138517.1-201ENST00000515724 568 ntBASIC4.8□□□□□ -1.64
UPK2O00526 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
UPK2O00526 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC4.8□□□□□ -1.64
UPK2O00526 RBM7-208ENST00000545678 867 ntTSL 3 BASIC4.8□□□□□ -1.64
UPK2O00526 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC4.8□□□□□ -1.64
UPK2O00526 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
UPK2O00526 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC4.8□□□□□ -1.64
UPK2O00526 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC4.8□□□□□ -1.64
UPK2O00526 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC4.8□□□□□ -1.64
UPK2O00526 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC4.8□□□□□ -1.64
UPK2O00526 OSTC-205ENST00000613215 876 ntTSL 2 BASIC4.8□□□□□ -1.64
UPK2O00526 RFPL4AP6-201ENST00000616792 846 ntBASIC4.8□□□□□ -1.64
UPK2O00526 AC241377.1-201ENST00000619797 406 ntBASIC4.8□□□□□ -1.64
UPK2O00526 AC000095.2-202ENST00000637415 154 ntBASIC4.8□□□□□ -1.64
UPK2O00526 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC4.8□□□□□ -1.64
UPK2O00526 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
UPK2O00526 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
UPK2O00526 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
UPK2O00526 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
UPK2O00526 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
UPK2O00526 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
UPK2O00526 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
UPK2O00526 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
UPK2O00526 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
UPK2O00526 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
UPK2O00526 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC4.79□□□□□ -1.64
UPK2O00526 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC4.79□□□□□ -1.64
UPK2O00526 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
UPK2O00526 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
UPK2O00526 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
UPK2O00526 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC4.79□□□□□ -1.64
UPK2O00526 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
UPK2O00526 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
UPK2O00526 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC4.79□□□□□ -1.64
UPK2O00526 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
UPK2O00526 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
UPK2O00526 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
UPK2O00526 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
UPK2O00526 RNA5SP211-201ENST00000365516 117 ntBASIC4.79□□□□□ -1.64
UPK2O00526 TRAV35-201ENST00000390462 330 ntBASIC4.79□□□□□ -1.64
UPK2O00526 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC4.79□□□□□ -1.64
UPK2O00526 NME1P1-201ENST00000420914 382 ntBASIC4.79□□□□□ -1.64
UPK2O00526 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
UPK2O00526 RPSAP40-201ENST00000442343 891 ntBASIC4.79□□□□□ -1.64
UPK2O00526 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC4.79□□□□□ -1.64
UPK2O00526 AC002553.3-201ENST00000453002 341 ntBASIC4.79□□□□□ -1.64
UPK2O00526 PFN1P6-201ENST00000476786 399 ntBASIC4.79□□□□□ -1.64
UPK2O00526 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC4.79□□□□□ -1.64
UPK2O00526 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC4.79□□□□□ -1.64
UPK2O00526 HMGN1P16-201ENST00000508308 283 ntBASIC4.79□□□□□ -1.64
UPK2O00526 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
UPK2O00526 ZNF519P4-201ENST00000514008 125 ntBASIC4.79□□□□□ -1.64
UPK2O00526 CR383658.1-201ENST00000514609 734 ntBASIC4.79□□□□□ -1.64
UPK2O00526 IGHVIII-47-1-201ENST00000518187 331 ntBASIC4.79□□□□□ -1.64
UPK2O00526 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
UPK2O00526 AC078899.1-201ENST00000521432 1185 ntBASIC4.79□□□□□ -1.64
UPK2O00526 OR7E158P-201ENST00000524483 910 ntBASIC4.79□□□□□ -1.64
UPK2O00526 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC4.79□□□□□ -1.64
UPK2O00526 OR4A42P-201ENST00000531397 938 ntBASIC4.79□□□□□ -1.64
UPK2O00526 NPIPB14P-203ENST00000532298 987 ntBASIC4.79□□□□□ -1.64
UPK2O00526 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC4.79□□□□□ -1.64
UPK2O00526 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC4.79□□□□□ -1.64
UPK2O00526 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC4.79□□□□□ -1.64
UPK2O00526 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC4.79□□□□□ -1.64
UPK2O00526 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC4.79□□□□□ -1.64
UPK2O00526 AP001357.1-201ENST00000586304 1053 ntBASIC4.79□□□□□ -1.64
UPK2O00526 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC4.79□□□□□ -1.64
UPK2O00526 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC4.79□□□□□ -1.64
UPK2O00526 AC010325.3-201ENST00000641084 394 ntBASIC4.79□□□□□ -1.64
UPK2O00526 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms