Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
FOXN3O00409 MTND6P8-201ENST00000503471 522 ntBASIC6.71□□□□□ -1.34
FOXN3O00409 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
FOXN3O00409 RNU6-491P-201ENST00000516099 110 ntBASIC6.71□□□□□ -1.34
FOXN3O00409 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC6.71□□□□□ -1.34
FOXN3O00409 AC019227.1-201ENST00000526902 510 ntBASIC6.71□□□□□ -1.34
FOXN3O00409 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC6.71□□□□□ -1.34
FOXN3O00409 AC008147.3-201ENST00000548666 354 ntBASIC6.71□□□□□ -1.34
FOXN3O00409 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC6.71□□□□□ -1.34
FOXN3O00409 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.71□□□□□ -1.34
FOXN3O00409 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC6.71□□□□□ -1.34
FOXN3O00409 AC092868.3-201ENST00000560515 784 ntBASIC6.71□□□□□ -1.34
FOXN3O00409 RN7SL66P-201ENST00000582099 264 ntBASIC6.71□□□□□ -1.34
FOXN3O00409 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.71□□□□□ -1.34
FOXN3O00409 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6.71□□□□□ -1.34
FOXN3O00409 BNIP3P19-201ENST00000605397 577 ntBASIC6.71□□□□□ -1.34
FOXN3O00409 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
FOXN3O00409 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC6.71□□□□□ -1.34
FOXN3O00409 MAPK10-350ENST00000641777 965 ntBASIC6.71□□□□□ -1.34
FOXN3O00409 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
FOXN3O00409 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.34
FOXN3O00409 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.34
FOXN3O00409 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
FOXN3O00409 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
FOXN3O00409 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.71□□□□□ -1.34
FOXN3O00409 AL133243.2-201ENST00000610331 1621 ntBASIC6.71□□□□□ -1.34
FOXN3O00409 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.71□□□□□ -1.34
FOXN3O00409 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
FOXN3O00409 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
FOXN3O00409 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
FOXN3O00409 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC6.71□□□□□ -1.34
FOXN3O00409 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
FOXN3O00409 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
FOXN3O00409 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.71□□□□□ -1.34
FOXN3O00409 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
FOXN3O00409 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
FOXN3O00409 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.71□□□□□ -1.34
FOXN3O00409 AC079753.1-201ENST00000623243 3868 ntBASIC6.71□□□□□ -1.34
FOXN3O00409 SHQ1P1-201ENST00000437111 1544 ntBASIC6.71□□□□□ -1.34
FOXN3O00409 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
FOXN3O00409 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
FOXN3O00409 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
FOXN3O00409 AC083899.2-201ENST00000423285 1376 ntBASIC6.7□□□□□ -1.34
FOXN3O00409 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
FOXN3O00409 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
FOXN3O00409 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.7□□□□□ -1.34
FOXN3O00409 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
FOXN3O00409 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.7□□□□□ -1.34
FOXN3O00409 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
FOXN3O00409 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
FOXN3O00409 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC6.7□□□□□ -1.34
FOXN3O00409 RNA5SP77-201ENST00000365394 120 ntBASIC6.7□□□□□ -1.34
FOXN3O00409 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
FOXN3O00409 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.7□□□□□ -1.34
FOXN3O00409 GGA1-205ENST00000405147 575 ntTSL 4 BASIC6.7□□□□□ -1.34
FOXN3O00409 AL451046.1-201ENST00000406097 534 ntBASIC6.7□□□□□ -1.34
FOXN3O00409 RNA5SP251-201ENST00000410614 137 ntBASIC6.7□□□□□ -1.34
FOXN3O00409 RN7SKP121-201ENST00000410842 305 ntBASIC6.7□□□□□ -1.34
FOXN3O00409 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC6.7□□□□□ -1.34
FOXN3O00409 HMGA1P8-201ENST00000414130 321 ntBASIC6.7□□□□□ -1.34
FOXN3O00409 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.7□□□□□ -1.34
FOXN3O00409 GAPDHP19-201ENST00000431768 1005 ntBASIC6.7□□□□□ -1.34
FOXN3O00409 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC6.7□□□□□ -1.34
FOXN3O00409 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.7□□□□□ -1.34
FOXN3O00409 MTND2P21-201ENST00000436242 1042 ntBASIC6.7□□□□□ -1.34
FOXN3O00409 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC6.7□□□□□ -1.34
FOXN3O00409 EMC3-AS1-205ENST00000438698 534 ntBASIC6.7□□□□□ -1.34
FOXN3O00409 AC016908.1-201ENST00000442571 1219 ntBASIC6.7□□□□□ -1.34
FOXN3O00409 AL161722.1-201ENST00000446972 1032 ntBASIC6.7□□□□□ -1.34
FOXN3O00409 RN7SL393P-201ENST00000463588 296 ntBASIC6.7□□□□□ -1.34
FOXN3O00409 RN7SL326P-201ENST00000477493 296 ntBASIC6.7□□□□□ -1.34
FOXN3O00409 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
FOXN3O00409 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC6.7□□□□□ -1.34
FOXN3O00409 AC108157.1-201ENST00000510511 539 ntBASIC6.7□□□□□ -1.34
FOXN3O00409 FABP5P6-201ENST00000510588 409 ntBASIC6.7□□□□□ -1.34
FOXN3O00409 RNA5SP400-201ENST00000517155 111 ntBASIC6.7□□□□□ -1.34
FOXN3O00409 RNU6-889P-201ENST00000517189 103 ntBASIC6.7□□□□□ -1.34
FOXN3O00409 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC6.7□□□□□ -1.34
FOXN3O00409 AC113191.1-201ENST00000517759 403 ntBASIC6.7□□□□□ -1.34
FOXN3O00409 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.7□□□□□ -1.34
FOXN3O00409 AC124891.1-201ENST00000536322 519 ntBASIC6.7□□□□□ -1.34
FOXN3O00409 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC6.7□□□□□ -1.34
FOXN3O00409 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC6.7□□□□□ -1.34
FOXN3O00409 AL133247.2-201ENST00000603236 482 ntBASIC6.7□□□□□ -1.34
FOXN3O00409 AL671309.1-201ENST00000603750 544 ntBASIC6.7□□□□□ -1.34
FOXN3O00409 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.7□□□□□ -1.34
FOXN3O00409 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC6.7□□□□□ -1.34
FOXN3O00409 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC6.7□□□□□ -1.34
FOXN3O00409 AC084824.5-201ENST00000612009 413 ntBASIC6.7□□□□□ -1.34
FOXN3O00409 AC089999.3-201ENST00000622440 577 ntBASIC6.7□□□□□ -1.34
FOXN3O00409 AC079298.2-201ENST00000623885 459 ntBASIC6.7□□□□□ -1.34
FOXN3O00409 AP003499.2-201ENST00000624100 483 ntBASIC6.7□□□□□ -1.34
FOXN3O00409 AC106858.1-201ENST00000637497 429 ntBASIC6.7□□□□□ -1.34
FOXN3O00409 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC6.7□□□□□ -1.34
FOXN3O00409 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.7□□□□□ -1.34
FOXN3O00409 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
FOXN3O00409 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
FOXN3O00409 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.7□□□□□ -1.34
FOXN3O00409 OR10AB1P-202ENST00000641219 1686 ntBASIC6.7□□□□□ -1.34
FOXN3O00409 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms