Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AC005479.1-201ENST00000554629 451 ntBASIC6.45□□□□□ -1.38
SHISA3A0PJX4 TRIM69-210ENST00000561043 1017 ntTSL 3 BASIC6.45□□□□□ -1.38
SHISA3A0PJX4 AC027763.2-201ENST00000573755 539 ntTSL 4 BASIC6.45□□□□□ -1.38
SHISA3A0PJX4 AC090415.1-201ENST00000581877 847 ntBASIC6.45□□□□□ -1.38
SHISA3A0PJX4 AC138761.2-201ENST00000583878 343 ntBASIC6.45□□□□□ -1.38
SHISA3A0PJX4 AC090616.1-201ENST00000583895 447 ntBASIC6.45□□□□□ -1.38
SHISA3A0PJX4 OR4G1P-201ENST00000588632 938 ntBASIC6.45□□□□□ -1.38
SHISA3A0PJX4 OR7A18P-201ENST00000600416 277 ntBASIC6.45□□□□□ -1.38
SHISA3A0PJX4 AC091805.2-201ENST00000603848 235 ntBASIC6.45□□□□□ -1.38
SHISA3A0PJX4 AC069545.1-201ENST00000605671 358 ntBASIC6.45□□□□□ -1.38
SHISA3A0PJX4 AC073218.2-201ENST00000606468 295 ntTSL 5 BASIC6.45□□□□□ -1.38
SHISA3A0PJX4 AC009686.2-201ENST00000607017 577 ntBASIC6.45□□□□□ -1.38
SHISA3A0PJX4 AL391497.1-201ENST00000608671 547 ntBASIC6.45□□□□□ -1.38
SHISA3A0PJX4 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SHISA3A0PJX4 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC6.45□□□□□ -1.38
SHISA3A0PJX4 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC6.45□□□□□ -1.38
SHISA3A0PJX4 LINC01176-202ENST00000628121 716 ntTSL 3 BASIC6.45□□□□□ -1.38
SHISA3A0PJX4 FLII-230ENST00000628188 156 ntTSL 5 BASIC6.45□□□□□ -1.38
SHISA3A0PJX4 TMEM55A-206ENST00000630164 171 ntTSL 5 BASIC6.45□□□□□ -1.38
SHISA3A0PJX4 AL356289.1-201ENST00000635446 743 ntTSL 3 BASIC6.45□□□□□ -1.38
SHISA3A0PJX4 AC233280.20-201ENST00000637412 416 ntBASIC6.45□□□□□ -1.38
SHISA3A0PJX4 AC099654.12-201ENST00000639868 649 ntBASIC6.45□□□□□ -1.38
SHISA3A0PJX4 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
SHISA3A0PJX4 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC6.45□□□□□ -1.38
SHISA3A0PJX4 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SHISA3A0PJX4 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
SHISA3A0PJX4 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SHISA3A0PJX4 MGAT4A-202ENST00000393487 8382 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
SHISA3A0PJX4 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
SHISA3A0PJX4 SF3A3P1-201ENST00000446317 1477 ntBASIC6.45□□□□□ -1.38
SHISA3A0PJX4 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SHISA3A0PJX4 NPL-212ENST00000614468 2376 ntTSL 5 BASIC6.45□□□□□ -1.38
SHISA3A0PJX4 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SHISA3A0PJX4 EVI2A-203ENST00000462804 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
SHISA3A0PJX4 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC6.45□□□□□ -1.38
SHISA3A0PJX4 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SHISA3A0PJX4 AC090181.3-201ENST00000624777 1514 ntBASIC6.45□□□□□ -1.38
SHISA3A0PJX4 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SHISA3A0PJX4 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SHISA3A0PJX4 IARS-205ENST00000443024 4341 ntTSL 5 BASIC6.44□□□□□ -1.38
SHISA3A0PJX4 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SHISA3A0PJX4 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
SHISA3A0PJX4 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC6.44□□□□□ -1.38
SHISA3A0PJX4 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SHISA3A0PJX4 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SHISA3A0PJX4 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
SHISA3A0PJX4 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC6.44□□□□□ -1.38
SHISA3A0PJX4 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC6.44□□□□□ -1.38
SHISA3A0PJX4 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SHISA3A0PJX4 AC092979.1-201ENST00000488190 1414 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SHISA3A0PJX4 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SHISA3A0PJX4 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC6.44□□□□□ -1.38
SHISA3A0PJX4 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
SHISA3A0PJX4 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SHISA3A0PJX4 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
SHISA3A0PJX4 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SHISA3A0PJX4 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SHISA3A0PJX4 AL121657.1-201ENST00000327215 531 ntBASIC6.44□□□□□ -1.38
SHISA3A0PJX4 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
SHISA3A0PJX4 DYNLRB1-202ENST00000357156 675 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SHISA3A0PJX4 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SHISA3A0PJX4 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
SHISA3A0PJX4 CASP10-206ENST00000374650 1126 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SHISA3A0PJX4 AL139327.1-201ENST00000382988 348 ntBASIC6.44□□□□□ -1.38
SHISA3A0PJX4 RNU6-253P-201ENST00000384730 105 ntBASIC6.44□□□□□ -1.38
SHISA3A0PJX4 TRBV7-4-201ENST00000390369 347 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
SHISA3A0PJX4 TRBV7-7-201ENST00000390377 347 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
SHISA3A0PJX4 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC6.44□□□□□ -1.38
SHISA3A0PJX4 AL079341.1-201ENST00000404701 1207 ntBASIC6.44□□□□□ -1.38
SHISA3A0PJX4 OR4E2-201ENST00000408935 942 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
SHISA3A0PJX4 REG3G-203ENST00000409471 575 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SHISA3A0PJX4 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC6.44□□□□□ -1.38
SHISA3A0PJX4 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC6.44□□□□□ -1.38
SHISA3A0PJX4 RPA2P2-201ENST00000419698 796 ntBASIC6.44□□□□□ -1.38
SHISA3A0PJX4 PPIAP25-201ENST00000420177 540 ntBASIC6.44□□□□□ -1.38
SHISA3A0PJX4 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC6.44□□□□□ -1.38
SHISA3A0PJX4 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC6.44□□□□□ -1.38
SHISA3A0PJX4 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC6.44□□□□□ -1.38
SHISA3A0PJX4 Z68868.1-201ENST00000429048 544 ntBASIC6.44□□□□□ -1.38
SHISA3A0PJX4 MTRF1-204ENST00000430347 557 ntTSL 5 BASIC6.44□□□□□ -1.38
SHISA3A0PJX4 AC091390.2-201ENST00000432573 374 ntBASIC6.44□□□□□ -1.38
SHISA3A0PJX4 AL596276.1-201ENST00000434465 418 ntBASIC6.44□□□□□ -1.38
SHISA3A0PJX4 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC6.44□□□□□ -1.38
SHISA3A0PJX4 USP9YP29-201ENST00000445112 563 ntBASIC6.44□□□□□ -1.38
SHISA3A0PJX4 ZNF619P1-201ENST00000446539 752 ntBASIC6.44□□□□□ -1.38
SHISA3A0PJX4 AC022400.2-201ENST00000446730 866 ntTSL 2 BASIC6.44□□□□□ -1.38
SHISA3A0PJX4 OR2AI1P-201ENST00000448534 932 ntBASIC6.44□□□□□ -1.38
SHISA3A0PJX4 FGF7P6-202ENST00000451282 293 ntBASIC6.44□□□□□ -1.38
SHISA3A0PJX4 ELOCP23-201ENST00000452014 332 ntBASIC6.44□□□□□ -1.38
SHISA3A0PJX4 AL590490.1-201ENST00000455599 316 ntTSL 5 BASIC6.44□□□□□ -1.38
SHISA3A0PJX4 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC6.44□□□□□ -1.38
SHISA3A0PJX4 MTCO3P38-201ENST00000468910 766 ntBASIC6.44□□□□□ -1.38
SHISA3A0PJX4 RN7SL107P-201ENST00000478127 283 ntBASIC6.44□□□□□ -1.38
SHISA3A0PJX4 RN7SL332P-201ENST00000482163 254 ntBASIC6.44□□□□□ -1.38
SHISA3A0PJX4 AL355076.1-201ENST00000484315 270 ntBASIC6.44□□□□□ -1.38
SHISA3A0PJX4 AC009153.1-201ENST00000485799 496 ntBASIC6.44□□□□□ -1.38
SHISA3A0PJX4 MTND2P33-201ENST00000506452 1031 ntBASIC6.44□□□□□ -1.38
SHISA3A0PJX4 AC117473.1-201ENST00000508616 392 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SHISA3A0PJX4 AC109811.2-201ENST00000509609 452 ntBASIC6.44□□□□□ -1.38
SHISA3A0PJX4 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms