Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 Z95331.1-201ENST00000623075 23112 ntBASIC5.08□□□□□ -1.6
KCNIP3Q9Y2W7 RGS20-207ENST00000522225 1559 ntTSL 2 BASIC5.08□□□□□ -1.6
KCNIP3Q9Y2W7 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
KCNIP3Q9Y2W7 AL161756.3-201ENST00000641216 2071 ntBASIC5.08□□□□□ -1.6
KCNIP3Q9Y2W7 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.07□□□□□ -1.6
KCNIP3Q9Y2W7 AC133552.1-201ENST00000569988 4007 ntBASIC5.07□□□□□ -1.6
KCNIP3Q9Y2W7 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
KCNIP3Q9Y2W7 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.07□□□□□ -1.6
KCNIP3Q9Y2W7 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.07□□□□□ -1.6
KCNIP3Q9Y2W7 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
KCNIP3Q9Y2W7 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.07□□□□□ -1.6
KCNIP3Q9Y2W7 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
KCNIP3Q9Y2W7 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.07□□□□□ -1.6
KCNIP3Q9Y2W7 AC010132.4-201ENST00000569883 1368 ntBASIC5.07□□□□□ -1.6
KCNIP3Q9Y2W7 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.07□□□□□ -1.6
KCNIP3Q9Y2W7 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
KCNIP3Q9Y2W7 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
KCNIP3Q9Y2W7 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
KCNIP3Q9Y2W7 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
KCNIP3Q9Y2W7 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
KCNIP3Q9Y2W7 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
KCNIP3Q9Y2W7 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
KCNIP3Q9Y2W7 SNORA43.1-201ENST00000364863 140 ntBASIC5.07□□□□□ -1.6
KCNIP3Q9Y2W7 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.07□□□□□ -1.6
KCNIP3Q9Y2W7 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC5.07□□□□□ -1.6
KCNIP3Q9Y2W7 AL390866.1-201ENST00000425137 469 ntTSL 5 BASIC5.07□□□□□ -1.6
KCNIP3Q9Y2W7 AC009303.1-201ENST00000426307 352 ntBASIC5.07□□□□□ -1.6
KCNIP3Q9Y2W7 VN1R53P-201ENST00000429536 957 ntBASIC5.07□□□□□ -1.6
KCNIP3Q9Y2W7 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.07□□□□□ -1.6
KCNIP3Q9Y2W7 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.07□□□□□ -1.6
KCNIP3Q9Y2W7 AC078788.2-201ENST00000462300 382 ntTSL 3 BASIC5.07□□□□□ -1.6
KCNIP3Q9Y2W7 RN7SL223P-201ENST00000470401 294 ntBASIC5.07□□□□□ -1.6
KCNIP3Q9Y2W7 RN7SL643P-201ENST00000471845 291 ntBASIC5.07□□□□□ -1.6
KCNIP3Q9Y2W7 RPL5P22-201ENST00000480199 884 ntBASIC5.07□□□□□ -1.6
KCNIP3Q9Y2W7 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC5.07□□□□□ -1.6
KCNIP3Q9Y2W7 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.07□□□□□ -1.6
KCNIP3Q9Y2W7 AC005017.1-201ENST00000482002 490 ntBASIC5.07□□□□□ -1.6
KCNIP3Q9Y2W7 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC5.07□□□□□ -1.6
KCNIP3Q9Y2W7 OR2A3P-201ENST00000493774 953 ntBASIC5.07□□□□□ -1.6
KCNIP3Q9Y2W7 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.07□□□□□ -1.6
KCNIP3Q9Y2W7 AC138409.2-202ENST00000507274 458 ntBASIC5.07□□□□□ -1.6
KCNIP3Q9Y2W7 GLUD1P3-202ENST00000508551 200 ntBASIC5.07□□□□□ -1.6
KCNIP3Q9Y2W7 RPL7L1P7-201ENST00000509986 724 ntBASIC5.07□□□□□ -1.6
KCNIP3Q9Y2W7 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.07□□□□□ -1.6
KCNIP3Q9Y2W7 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC5.07□□□□□ -1.6
KCNIP3Q9Y2W7 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC5.07□□□□□ -1.6
KCNIP3Q9Y2W7 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
KCNIP3Q9Y2W7 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC5.07□□□□□ -1.6
KCNIP3Q9Y2W7 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC5.07□□□□□ -1.6
KCNIP3Q9Y2W7 AC116158.1-201ENST00000560231 2129 ntBASIC5.07□□□□□ -1.6
KCNIP3Q9Y2W7 AC010542.3-202ENST00000561728 701 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
KCNIP3Q9Y2W7 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.07□□□□□ -1.6
KCNIP3Q9Y2W7 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC5.07□□□□□ -1.6
KCNIP3Q9Y2W7 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.07□□□□□ -1.6
KCNIP3Q9Y2W7 AC103703.1-201ENST00000634783 663 ntBASIC5.07□□□□□ -1.6
KCNIP3Q9Y2W7 GOSR2-222ENST00000639031 885 ntTSL 3 BASIC5.07□□□□□ -1.6
KCNIP3Q9Y2W7 AC138627.1-204ENST00000641894 765 ntBASIC5.07□□□□□ -1.6
KCNIP3Q9Y2W7 AC003985.2-201ENST00000562268 1669 ntBASIC5.07□□□□□ -1.6
KCNIP3Q9Y2W7 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
KCNIP3Q9Y2W7 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
KCNIP3Q9Y2W7 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
KCNIP3Q9Y2W7 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
KCNIP3Q9Y2W7 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
KCNIP3Q9Y2W7 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
KCNIP3Q9Y2W7 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
KCNIP3Q9Y2W7 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC5.07□□□□□ -1.6
KCNIP3Q9Y2W7 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.07□□□□□ -1.6
KCNIP3Q9Y2W7 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC5.07□□□□□ -1.6
KCNIP3Q9Y2W7 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
KCNIP3Q9Y2W7 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
KCNIP3Q9Y2W7 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.06□□□□□ -1.6
KCNIP3Q9Y2W7 AC016583.1-201ENST00000624221 2431 ntBASIC5.06□□□□□ -1.6
KCNIP3Q9Y2W7 THAP12P9-201ENST00000503971 2360 ntBASIC5.06□□□□□ -1.6
KCNIP3Q9Y2W7 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
KCNIP3Q9Y2W7 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
KCNIP3Q9Y2W7 WFDC10B-202ENST00000335769 475 ntAPPRIS P4 TSL 1 (best) BASIC5.06□□□□□ -1.6
KCNIP3Q9Y2W7 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
KCNIP3Q9Y2W7 RPL11P3-201ENST00000395256 523 ntBASIC5.06□□□□□ -1.6
KCNIP3Q9Y2W7 RN7SKP166-201ENST00000410812 305 ntBASIC5.06□□□□□ -1.6
KCNIP3Q9Y2W7 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.06□□□□□ -1.6
KCNIP3Q9Y2W7 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.06□□□□□ -1.6
KCNIP3Q9Y2W7 FTLP19-201ENST00000433300 394 ntBASIC5.06□□□□□ -1.6
KCNIP3Q9Y2W7 CR391992.1-201ENST00000438601 394 ntBASIC5.06□□□□□ -1.6
KCNIP3Q9Y2W7 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
KCNIP3Q9Y2W7 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC5.06□□□□□ -1.6
KCNIP3Q9Y2W7 RN7SL326P-201ENST00000477493 296 ntBASIC5.06□□□□□ -1.6
KCNIP3Q9Y2W7 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.06□□□□□ -1.6
KCNIP3Q9Y2W7 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC5.06□□□□□ -1.6
KCNIP3Q9Y2W7 CCDC11P1-201ENST00000503137 1162 ntBASIC5.06□□□□□ -1.6
KCNIP3Q9Y2W7 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC5.06□□□□□ -1.6
KCNIP3Q9Y2W7 AC097460.2-201ENST00000511857 741 ntBASIC5.06□□□□□ -1.6
KCNIP3Q9Y2W7 RN7SKP242-201ENST00000515967 289 ntBASIC5.06□□□□□ -1.6
KCNIP3Q9Y2W7 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC5.06□□□□□ -1.6
KCNIP3Q9Y2W7 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
KCNIP3Q9Y2W7 AC026956.1-201ENST00000558741 396 ntBASIC5.06□□□□□ -1.6
KCNIP3Q9Y2W7 AC234775.3-201ENST00000564612 656 ntBASIC5.06□□□□□ -1.6
KCNIP3Q9Y2W7 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC5.06□□□□□ -1.6
KCNIP3Q9Y2W7 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.06□□□□□ -1.6
KCNIP3Q9Y2W7 AC126323.4-201ENST00000566935 234 ntBASIC5.06□□□□□ -1.6
KCNIP3Q9Y2W7 AL163952.1-202ENST00000569625 600 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 230.5 ms