Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
CNTN3Q9P232 ABCC4-201ENST00000376887 5839 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CNTN3Q9P232 AL356361.1-201ENST00000400943 1459 ntBASIC7.74□□□□□ -1.17
CNTN3Q9P232 NF1P8-201ENST00000415351 1461 ntBASIC7.74□□□□□ -1.17
CNTN3Q9P232 NCLP2-201ENST00000416078 1462 ntBASIC7.74□□□□□ -1.17
CNTN3Q9P232 AC079298.1-201ENST00000625026 1619 ntBASIC7.74□□□□□ -1.17
CNTN3Q9P232 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CNTN3Q9P232 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC7.74□□□□□ -1.17
CNTN3Q9P232 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC7.73□□□□□ -1.17
CNTN3Q9P232 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC7.73□□□□□ -1.17
CNTN3Q9P232 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CNTN3Q9P232 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CNTN3Q9P232 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC7.73□□□□□ -1.17
CNTN3Q9P232 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CNTN3Q9P232 LINC02347-201ENST00000397346 2458 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CNTN3Q9P232 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC7.73□□□□□ -1.17
CNTN3Q9P232 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CNTN3Q9P232 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
CNTN3Q9P232 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CNTN3Q9P232 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
CNTN3Q9P232 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CNTN3Q9P232 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CNTN3Q9P232 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CNTN3Q9P232 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
CNTN3Q9P232 FAR2-202ENST00000536681 3616 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CNTN3Q9P232 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC7.73□□□□□ -1.17
CNTN3Q9P232 Y_RNA.3-201ENST00000362331 103 ntBASIC7.73□□□□□ -1.17
CNTN3Q9P232 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
CNTN3Q9P232 RNU1-56P-201ENST00000391303 164 ntBASIC7.73□□□□□ -1.17
CNTN3Q9P232 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CNTN3Q9P232 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC7.73□□□□□ -1.17
CNTN3Q9P232 RN7SKP273-201ENST00000411392 314 ntBASIC7.73□□□□□ -1.17
CNTN3Q9P232 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC7.73□□□□□ -1.17
CNTN3Q9P232 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC7.73□□□□□ -1.17
CNTN3Q9P232 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CNTN3Q9P232 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC7.73□□□□□ -1.17
CNTN3Q9P232 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC7.73□□□□□ -1.17
CNTN3Q9P232 AC098592.1-201ENST00000419352 333 ntBASIC7.73□□□□□ -1.17
CNTN3Q9P232 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC7.73□□□□□ -1.17
CNTN3Q9P232 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC7.73□□□□□ -1.17
CNTN3Q9P232 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC7.73□□□□□ -1.17
CNTN3Q9P232 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC7.73□□□□□ -1.17
CNTN3Q9P232 HSD52-202ENST00000436225 772 ntTSL 3 BASIC7.73□□□□□ -1.17
CNTN3Q9P232 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC7.73□□□□□ -1.17
CNTN3Q9P232 RPS24P1-201ENST00000438550 371 ntBASIC7.73□□□□□ -1.17
CNTN3Q9P232 AC002486.2-201ENST00000447806 590 ntBASIC7.73□□□□□ -1.17
CNTN3Q9P232 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC7.73□□□□□ -1.17
CNTN3Q9P232 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC7.73□□□□□ -1.17
CNTN3Q9P232 OR51B8P-201ENST00000449892 769 ntBASIC7.73□□□□□ -1.17
CNTN3Q9P232 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC7.73□□□□□ -1.17
CNTN3Q9P232 EIF3LP2-201ENST00000457262 807 ntBASIC7.73□□□□□ -1.17
CNTN3Q9P232 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC7.73□□□□□ -1.17
CNTN3Q9P232 GLRXP3-201ENST00000470810 321 ntBASIC7.73□□□□□ -1.17
CNTN3Q9P232 RPL30P6-201ENST00000475925 342 ntBASIC7.73□□□□□ -1.17
CNTN3Q9P232 PFN2-209ENST00000481275 560 ntTSL 4 BASIC7.73□□□□□ -1.17
CNTN3Q9P232 AC092045.1-201ENST00000495716 1231 ntBASIC7.73□□□□□ -1.17
CNTN3Q9P232 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC7.73□□□□□ -1.17
CNTN3Q9P232 PGAM4P2-201ENST00000512491 721 ntBASIC7.73□□□□□ -1.17
CNTN3Q9P232 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC7.73□□□□□ -1.17
CNTN3Q9P232 AC027801.3-201ENST00000515049 698 ntBASIC7.73□□□□□ -1.17
CNTN3Q9P232 MTND4LP26-201ENST00000518144 282 ntBASIC7.73□□□□□ -1.17
CNTN3Q9P232 AC114550.1-201ENST00000518846 573 ntTSL 4 BASIC7.73□□□□□ -1.17
CNTN3Q9P232 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CNTN3Q9P232 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC7.73□□□□□ -1.17
CNTN3Q9P232 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC7.73□□□□□ -1.17
CNTN3Q9P232 AC104984.3-201ENST00000581946 546 ntTSL 5 BASIC7.73□□□□□ -1.17
CNTN3Q9P232 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC7.73□□□□□ -1.17
CNTN3Q9P232 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC7.73□□□□□ -1.17
CNTN3Q9P232 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC7.73□□□□□ -1.17
CNTN3Q9P232 AC073544.2-201ENST00000601155 540 ntBASIC7.73□□□□□ -1.17
CNTN3Q9P232 AF131215.7-201ENST00000602443 707 ntBASIC7.73□□□□□ -1.17
CNTN3Q9P232 AL583832.1-201ENST00000603227 784 ntBASIC7.73□□□□□ -1.17
CNTN3Q9P232 AL031775.1-201ENST00000607014 887 ntBASIC7.73□□□□□ -1.17
CNTN3Q9P232 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC7.73□□□□□ -1.17
CNTN3Q9P232 MIR7515HG-257ENST00000625915 852 ntTSL 5 BASIC7.73□□□□□ -1.17
CNTN3Q9P232 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC7.73□□□□□ -1.17
CNTN3Q9P232 TTTY15-202ENST00000440408 5284 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CNTN3Q9P232 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CNTN3Q9P232 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
CNTN3Q9P232 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC7.73□□□□□ -1.17
CNTN3Q9P232 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CNTN3Q9P232 KARSP2-201ENST00000415696 1639 ntBASIC7.73□□□□□ -1.17
CNTN3Q9P232 SEC23IP-208ENST00000543134 1461 ntTSL 5 BASIC7.73□□□□□ -1.17
CNTN3Q9P232 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC7.73□□□□□ -1.17
CNTN3Q9P232 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
CNTN3Q9P232 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
CNTN3Q9P232 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC7.73□□□□□ -1.17
CNTN3Q9P232 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC7.73□□□□□ -1.17
CNTN3Q9P232 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CNTN3Q9P232 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC7.73□□□□□ -1.17
CNTN3Q9P232 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CNTN3Q9P232 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CNTN3Q9P232 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
CNTN3Q9P232 BICC1-202ENST00000373886 5475 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CNTN3Q9P232 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CNTN3Q9P232 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC7.72□□□□□ -1.17
CNTN3Q9P232 AC027279.4-201ENST00000624371 2072 ntBASIC7.72□□□□□ -1.17
CNTN3Q9P232 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC7.72□□□□□ -1.17
CNTN3Q9P232 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC7.72□□□□□ -1.17
CNTN3Q9P232 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC7.72□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms