Protein–RNA interactions for Protein: Q9P003

CNIH4, Protein cornichon homolog 4, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4Q9P003 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
CNIH4Q9P003 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CNIH4Q9P003 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CNIH4Q9P003 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CNIH4Q9P003 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
CNIH4Q9P003 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CNIH4Q9P003 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.81□□□□□ -1.48
CNIH4Q9P003 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CNIH4Q9P003 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CNIH4Q9P003 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CNIH4Q9P003 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CNIH4Q9P003 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CNIH4Q9P003 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.8□□□□□ -1.48
CNIH4Q9P003 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CNIH4Q9P003 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CNIH4Q9P003 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CNIH4Q9P003 AOX3P-204ENST00000491025 2107 ntBASIC5.8□□□□□ -1.48
CNIH4Q9P003 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
CNIH4Q9P003 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CNIH4Q9P003 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CNIH4Q9P003 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.8□□□□□ -1.48
CNIH4Q9P003 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CNIH4Q9P003 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CNIH4Q9P003 RNU1-65P-201ENST00000363919 148 ntBASIC5.8□□□□□ -1.48
CNIH4Q9P003 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC5.8□□□□□ -1.48
CNIH4Q9P003 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CNIH4Q9P003 VN1R12P-201ENST00000403778 876 ntBASIC5.8□□□□□ -1.48
CNIH4Q9P003 MIR1275-201ENST00000408770 80 ntBASIC5.8□□□□□ -1.48
CNIH4Q9P003 NME1P1-201ENST00000420914 382 ntBASIC5.8□□□□□ -1.48
CNIH4Q9P003 AC092865.3-201ENST00000425390 1026 ntBASIC5.8□□□□□ -1.48
CNIH4Q9P003 AC112492.2-201ENST00000432774 1030 ntBASIC5.8□□□□□ -1.48
CNIH4Q9P003 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.8□□□□□ -1.48
CNIH4Q9P003 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CNIH4Q9P003 AC094019.1-201ENST00000434678 472 ntBASIC5.8□□□□□ -1.48
CNIH4Q9P003 TPTE2P1-204ENST00000435256 593 ntBASIC5.8□□□□□ -1.48
CNIH4Q9P003 GAPDHP59-201ENST00000435908 267 ntBASIC5.8□□□□□ -1.48
CNIH4Q9P003 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.8□□□□□ -1.48
CNIH4Q9P003 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.8□□□□□ -1.48
CNIH4Q9P003 OR52E7P-201ENST00000452394 933 ntBASIC5.8□□□□□ -1.48
CNIH4Q9P003 RARRES2P3-201ENST00000457739 473 ntBASIC5.8□□□□□ -1.48
CNIH4Q9P003 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.8□□□□□ -1.48
CNIH4Q9P003 OR9A1P-202ENST00000484361 945 ntBASIC5.8□□□□□ -1.48
CNIH4Q9P003 AP002453.1-201ENST00000492327 668 ntBASIC5.8□□□□□ -1.48
CNIH4Q9P003 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CNIH4Q9P003 OR4D12P-201ENST00000509361 911 ntBASIC5.8□□□□□ -1.48
CNIH4Q9P003 AC018797.1-201ENST00000510791 255 ntBASIC5.8□□□□□ -1.48
CNIH4Q9P003 RN7SKP248-201ENST00000516278 305 ntBASIC5.8□□□□□ -1.48
CNIH4Q9P003 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC5.8□□□□□ -1.48
CNIH4Q9P003 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.8□□□□□ -1.48
CNIH4Q9P003 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
CNIH4Q9P003 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC5.8□□□□□ -1.48
CNIH4Q9P003 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.8□□□□□ -1.48
CNIH4Q9P003 RN7SL475P-201ENST00000583379 298 ntBASIC5.8□□□□□ -1.48
CNIH4Q9P003 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.8□□□□□ -1.48
CNIH4Q9P003 ZNF658B-201ENST00000602828 3408 ntBASIC5.8□□□□□ -1.48
CNIH4Q9P003 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.8□□□□□ -1.48
CNIH4Q9P003 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CNIH4Q9P003 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CNIH4Q9P003 GUCY1B2-204ENST00000531898 1979 ntBASIC5.8□□□□□ -1.48
CNIH4Q9P003 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CNIH4Q9P003 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CNIH4Q9P003 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CNIH4Q9P003 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CNIH4Q9P003 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CNIH4Q9P003 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CNIH4Q9P003 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CNIH4Q9P003 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
CNIH4Q9P003 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CNIH4Q9P003 PROS2P-201ENST00000474651 1951 ntBASIC5.79□□□□□ -1.48
CNIH4Q9P003 FUNDC2P3-201ENST00000334716 533 ntBASIC5.79□□□□□ -1.48
CNIH4Q9P003 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.79□□□□□ -1.48
CNIH4Q9P003 AC107977.1-201ENST00000355745 939 ntBASIC5.79□□□□□ -1.48
CNIH4Q9P003 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.79□□□□□ -1.48
CNIH4Q9P003 AL157702.1-201ENST00000398764 426 ntBASIC5.79□□□□□ -1.48
CNIH4Q9P003 RN7SKP144-201ENST00000411108 279 ntBASIC5.79□□□□□ -1.48
CNIH4Q9P003 HMGA1P8-201ENST00000414130 321 ntBASIC5.79□□□□□ -1.48
CNIH4Q9P003 RAB9AP4-201ENST00000415230 609 ntBASIC5.79□□□□□ -1.48
CNIH4Q9P003 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.79□□□□□ -1.48
CNIH4Q9P003 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.79□□□□□ -1.48
CNIH4Q9P003 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CNIH4Q9P003 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.79□□□□□ -1.48
CNIH4Q9P003 AL590399.4-201ENST00000436561 601 ntBASIC5.79□□□□□ -1.48
CNIH4Q9P003 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.79□□□□□ -1.48
CNIH4Q9P003 OR13K1P-201ENST00000444577 975 ntBASIC5.79□□□□□ -1.48
CNIH4Q9P003 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.79□□□□□ -1.48
CNIH4Q9P003 MORF4-201ENST00000447135 971 ntBASIC5.79□□□□□ -1.48
CNIH4Q9P003 HMGB1P7-201ENST00000450921 612 ntBASIC5.79□□□□□ -1.48
CNIH4Q9P003 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.79□□□□□ -1.48
CNIH4Q9P003 AL022319.1-201ENST00000458183 1167 ntBASIC5.79□□□□□ -1.48
CNIH4Q9P003 AC095052.1-201ENST00000509955 863 ntBASIC5.79□□□□□ -1.48
CNIH4Q9P003 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.79□□□□□ -1.48
CNIH4Q9P003 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.79□□□□□ -1.48
CNIH4Q9P003 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC5.79□□□□□ -1.48
CNIH4Q9P003 ZNF519P4-201ENST00000514008 125 ntBASIC5.79□□□□□ -1.48
CNIH4Q9P003 RNA5SP473-201ENST00000516402 125 ntBASIC5.79□□□□□ -1.48
CNIH4Q9P003 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.79□□□□□ -1.48
CNIH4Q9P003 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.79□□□□□ -1.48
CNIH4Q9P003 OR4A42P-201ENST00000531397 938 ntBASIC5.79□□□□□ -1.48
CNIH4Q9P003 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.79□□□□□ -1.48
CNIH4Q9P003 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms