Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC7.75□□□□□ -1.17
CUEDC1Q9NWM3 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC7.75□□□□□ -1.17
CUEDC1Q9NWM3 LINC02345-202ENST00000558081 1147 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CUEDC1Q9NWM3 AC087477.6-201ENST00000559595 843 ntBASIC7.75□□□□□ -1.17
CUEDC1Q9NWM3 AC243312.1-201ENST00000570582 275 ntBASIC7.75□□□□□ -1.17
CUEDC1Q9NWM3 MIR3714-201ENST00000579507 65 ntBASIC7.75□□□□□ -1.17
CUEDC1Q9NWM3 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC7.75□□□□□ -1.17
CUEDC1Q9NWM3 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CUEDC1Q9NWM3 AC090774.2-201ENST00000584708 322 ntBASIC7.75□□□□□ -1.17
CUEDC1Q9NWM3 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC7.75□□□□□ -1.17
CUEDC1Q9NWM3 AC093503.1-202ENST00000598743 478 ntTSL 5 BASIC7.75□□□□□ -1.17
CUEDC1Q9NWM3 AC008536.2-201ENST00000607284 349 ntBASIC7.75□□□□□ -1.17
CUEDC1Q9NWM3 AC005303.1-201ENST00000607906 740 ntTSL 5 BASIC7.75□□□□□ -1.17
CUEDC1Q9NWM3 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC7.75□□□□□ -1.17
CUEDC1Q9NWM3 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC7.75□□□□□ -1.17
CUEDC1Q9NWM3 AC010338.1-201ENST00000621823 717 ntBASIC7.75□□□□□ -1.17
CUEDC1Q9NWM3 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC7.75□□□□□ -1.17
CUEDC1Q9NWM3 MIR3120-201ENST00000636555 81 ntBASIC7.75□□□□□ -1.17
CUEDC1Q9NWM3 OR13D1-202ENST00000641530 945 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
CUEDC1Q9NWM3 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
CUEDC1Q9NWM3 ANKS1B-215ENST00000549493 3328 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CUEDC1Q9NWM3 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CUEDC1Q9NWM3 RUNX1T1-249ENST00000613886 7401 ntAPPRIS ALT1 TSL 5 BASIC7.75□□□□□ -1.17
CUEDC1Q9NWM3 DNAJC5G-202ENST00000402462 1904 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CUEDC1Q9NWM3 TCF4-203ENST00000398339 2551 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CUEDC1Q9NWM3 REG4-203ENST00000369401 2327 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CUEDC1Q9NWM3 ZNF793-208ENST00000588578 4549 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CUEDC1Q9NWM3 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CUEDC1Q9NWM3 AL359715.4-201ENST00000606629 1436 ntBASIC7.75□□□□□ -1.17
CUEDC1Q9NWM3 CCDC39-201ENST00000442201 3279 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
CUEDC1Q9NWM3 CHD8-213ENST00000557364 8137 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
CUEDC1Q9NWM3 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
CUEDC1Q9NWM3 ZNF174-203ENST00000571936 1586 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
CUEDC1Q9NWM3 PTBP2-203ENST00000426398 3027 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
CUEDC1Q9NWM3 DLG2-202ENST00000330014 2789 ntTSL 2 BASIC7.75□□□□□ -1.17
CUEDC1Q9NWM3 AL133467.3-203ENST00000461160 3574 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CUEDC1Q9NWM3 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CUEDC1Q9NWM3 C15orf41-214ENST00000569302 1325 ntAPPRIS ALT1 TSL 5 BASIC7.75□□□□□ -1.17
CUEDC1Q9NWM3 UNC5D-206ENST00000453357 7002 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
CUEDC1Q9NWM3 SPRY1-202ENST00000394339 2504 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CUEDC1Q9NWM3 TNFAIP8-204ENST00000503646 2502 ntTSL 2 BASIC7.75□□□□□ -1.17
CUEDC1Q9NWM3 MAPK10-319ENST00000641459 2542 ntBASIC7.75□□□□□ -1.17
CUEDC1Q9NWM3 ABCA17P-204ENST00000494925 3478 ntBASIC7.75□□□□□ -1.17
CUEDC1Q9NWM3 AC079298.1-201ENST00000625026 1619 ntBASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 SLC2A14-215ENST00000542546 3120 ntTSL 5 BASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 ZNRD1ASP-211ENST00000376797 3270 ntTSL 2 BASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 SOX5-202ENST00000381381 3991 ntTSL 5 BASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 LRP12-201ENST00000276654 4112 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 SUPT20H-205ENST00000464744 2625 ntAPPRIS P3 TSL 2 BASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 AC245100.2-201ENST00000454544 1679 ntBASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 BDNF-206ENST00000395983 3776 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 RIOK2-201ENST00000283109 3922 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 OR51M1-203ENST00000642046 4092 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 GOSR2-238ENST00000640495 3395 ntTSL 5 BASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 LINC02209-201ENST00000521245 2651 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 PARP2-204ENST00000527915 1980 ntTSL 2 BASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 OR9G4-201ENST00000302957 984 ntBASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 PDXDC1-201ENST00000325823 1113 ntTSL 5 BASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 KLRG1-202ENST00000356986 1206 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 Y_RNA.372-201ENST00000365599 102 ntBASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 TAF9BP1-201ENST00000396646 746 ntBASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 RNA5SP231-201ENST00000410496 138 ntBASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 AC008758.2-201ENST00000420038 695 ntTSL 2 BASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 AL031963.2-201ENST00000433761 398 ntTSL 2 BASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 AL049646.2-201ENST00000436848 258 ntTSL 2 BASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 AC002066.1-202ENST00000439070 699 ntTSL 3 BASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 AC084809.2-201ENST00000444464 512 ntTSL 2 BASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 FANK1-AS1-201ENST00000445458 428 ntTSL 3 BASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 ARL2BPP7-201ENST00000446421 490 ntBASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 PSPHP1-201ENST00000450062 261 ntBASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 EIPR1-IT1-201ENST00000454977 718 ntTSL 2 BASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 VPS26AP1-201ENST00000483197 979 ntBASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 PDPN-205ENST00000487038 607 ntTSL 2 BASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 HMGN1P12-201ENST00000499125 195 ntBASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 RNF138P1-201ENST00000502765 546 ntBASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 AC008592.1-201ENST00000503091 665 ntTSL 3 BASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 AC098583.2-201ENST00000504151 372 ntBASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 AC023632.1-201ENST00000518463 375 ntBASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 IGHVIII-38-1-201ENST00000521454 282 ntBASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 AC091096.1-201ENST00000521955 614 ntTSL 3 BASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC7.74□□□□□ -1.17
CUEDC1Q9NWM3 AC005230.1-201ENST00000555418 285 ntBASIC7.74□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms