Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 AL035660.2-202ENST00000641233 242 ntBASIC10.06□□□□□ -0.8
RTN4Q9NQC3 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC10.06□□□□□ -0.8
RTN4Q9NQC3 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
RTN4Q9NQC3 AL445437.1-201ENST00000623157 3087 ntBASIC10.06□□□□□ -0.8
RTN4Q9NQC3 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
RTN4Q9NQC3 ZC3H6-202ENST00000409871 11542 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
RTN4Q9NQC3 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
RTN4Q9NQC3 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC10.06□□□□□ -0.8
RTN4Q9NQC3 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
RTN4Q9NQC3 TRIM55-202ENST00000315962 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
RTN4Q9NQC3 HDAC9-201ENST00000401921 3254 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
RTN4Q9NQC3 ZNF415-213ENST00000597503 2469 ntTSL 2 BASIC10.06□□□□□ -0.8
RTN4Q9NQC3 SLC36A2-201ENST00000335244 3421 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
RTN4Q9NQC3 AC009229.4-201ENST00000623854 1947 ntBASIC10.05□□□□□ -0.8
RTN4Q9NQC3 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
RTN4Q9NQC3 PARP1P1-201ENST00000413631 3026 ntBASIC10.05□□□□□ -0.8
RTN4Q9NQC3 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
RTN4Q9NQC3 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
RTN4Q9NQC3 RPL21-204ENST00000326092 641 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
RTN4Q9NQC3 OR7A17-201ENST00000327462 1127 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
RTN4Q9NQC3 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
RTN4Q9NQC3 UBE2D3-206ENST00000357194 660 ntTSL 2 BASIC10.05□□□□□ -0.8
RTN4Q9NQC3 RNU6-777P-201ENST00000364265 104 ntBASIC10.05□□□□□ -0.8
RTN4Q9NQC3 FCRLA-207ENST00000367950 823 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
RTN4Q9NQC3 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC10.05□□□□□ -0.8
RTN4Q9NQC3 TRBV7-6-201ENST00000390374 392 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
RTN4Q9NQC3 TRAV29DV5-201ENST00000390458 469 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
RTN4Q9NQC3 CEBPZOS-202ENST00000397064 568 ntAPPRIS P1 TSL 4 BASIC10.05□□□□□ -0.8
RTN4Q9NQC3 RNU4-55P-201ENST00000410731 137 ntBASIC10.05□□□□□ -0.8
RTN4Q9NQC3 RPS3AP9-201ENST00000417027 792 ntBASIC10.05□□□□□ -0.8
RTN4Q9NQC3 MED15P4-201ENST00000417579 393 ntBASIC10.05□□□□□ -0.8
RTN4Q9NQC3 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC10.05□□□□□ -0.8
RTN4Q9NQC3 AL139413.1-201ENST00000421309 217 ntBASIC10.05□□□□□ -0.8
RTN4Q9NQC3 AC104837.2-201ENST00000427236 424 ntBASIC10.05□□□□□ -0.8
RTN4Q9NQC3 FAM133B-202ENST00000427372 931 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
RTN4Q9NQC3 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC10.05□□□□□ -0.8
RTN4Q9NQC3 AL137793.1-201ENST00000433734 599 ntTSL 3 BASIC10.05□□□□□ -0.8
RTN4Q9NQC3 AC244098.1-201ENST00000436499 275 ntBASIC10.05□□□□□ -0.8
RTN4Q9NQC3 HMGB1P31-201ENST00000437242 427 ntBASIC10.05□□□□□ -0.8
RTN4Q9NQC3 PFN1P1-201ENST00000442087 423 ntBASIC10.05□□□□□ -0.8
RTN4Q9NQC3 AC243772.1-201ENST00000451620 410 ntBASIC10.05□□□□□ -0.8
RTN4Q9NQC3 RN7SL63P-201ENST00000468228 304 ntBASIC10.05□□□□□ -0.8
RTN4Q9NQC3 LINC00881-202ENST00000471719 791 ntTSL 2 BASIC10.05□□□□□ -0.8
RTN4Q9NQC3 LINC00518-202ENST00000479822 906 ntTSL 3 BASIC10.05□□□□□ -0.8
RTN4Q9NQC3 AC048341.1-201ENST00000480482 403 ntBASIC10.05□□□□□ -0.8
RTN4Q9NQC3 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC10.05□□□□□ -0.8
RTN4Q9NQC3 AC131210.1-201ENST00000491347 441 ntTSL 3 BASIC10.05□□□□□ -0.8
RTN4Q9NQC3 AC034222.1-201ENST00000494052 532 ntBASIC10.05□□□□□ -0.8
RTN4Q9NQC3 NUP210P3-201ENST00000506964 388 ntBASIC10.05□□□□□ -0.8
RTN4Q9NQC3 AC233724.16-201ENST00000510838 1201 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
RTN4Q9NQC3 AC104986.1-201ENST00000517978 436 ntBASIC10.05□□□□□ -0.8
RTN4Q9NQC3 AC136443.2-201ENST00000528546 258 ntBASIC10.05□□□□□ -0.8
RTN4Q9NQC3 CYCSP28-201ENST00000534284 321 ntBASIC10.05□□□□□ -0.8
RTN4Q9NQC3 AC020611.1-201ENST00000537101 254 ntBASIC10.05□□□□□ -0.8
RTN4Q9NQC3 RTN4IP1-204ENST00000539449 814 ntTSL 2 BASIC10.05□□□□□ -0.8
RTN4Q9NQC3 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC10.05□□□□□ -0.8
RTN4Q9NQC3 AL929601.1-202ENST00000551067 418 ntTSL 3 BASIC10.05□□□□□ -0.8
RTN4Q9NQC3 AC121758.1-202ENST00000556917 658 ntBASIC10.05□□□□□ -0.8
RTN4Q9NQC3 NR2F2-AS1-203ENST00000558929 574 ntTSL 5 BASIC10.05□□□□□ -0.8
RTN4Q9NQC3 HMGB1P33-201ENST00000563485 527 ntBASIC10.05□□□□□ -0.8
RTN4Q9NQC3 AC136619.1-201ENST00000564015 258 ntBASIC10.05□□□□□ -0.8
RTN4Q9NQC3 AL031722.1-201ENST00000570247 220 ntTSL 5 BASIC10.05□□□□□ -0.8
RTN4Q9NQC3 AC034268.2-201ENST00000571784 482 ntBASIC10.05□□□□□ -0.8
RTN4Q9NQC3 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
RTN4Q9NQC3 RN7SL509P-201ENST00000579670 297 ntBASIC10.05□□□□□ -0.8
RTN4Q9NQC3 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC10.05□□□□□ -0.8
RTN4Q9NQC3 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC10.05□□□□□ -0.8
RTN4Q9NQC3 AC008878.1-202ENST00000599312 382 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
RTN4Q9NQC3 AC011487.2-201ENST00000600193 1228 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
RTN4Q9NQC3 AC011468.4-201ENST00000603942 409 ntBASIC10.05□□□□□ -0.8
RTN4Q9NQC3 SUGT1P3-202ENST00000604259 383 ntBASIC10.05□□□□□ -0.8
RTN4Q9NQC3 AC008277.2-201ENST00000605196 797 ntBASIC10.05□□□□□ -0.8
RTN4Q9NQC3 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC10.05□□□□□ -0.8
RTN4Q9NQC3 DUXAP9-208ENST00000622815 614 ntBASIC10.05□□□□□ -0.8
RTN4Q9NQC3 RHOXF1P3-201ENST00000635058 502 ntBASIC10.05□□□□□ -0.8
RTN4Q9NQC3 SERPINB8-203ENST00000397985 3477 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
RTN4Q9NQC3 OR2F1-203ENST00000641412 4829 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
RTN4Q9NQC3 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC10.05□□□□□ -0.8
RTN4Q9NQC3 AC018647.1-202ENST00000449644 1651 ntTSL 5 BASIC10.05□□□□□ -0.8
RTN4Q9NQC3 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC10.05□□□□□ -0.8
RTN4Q9NQC3 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
RTN4Q9NQC3 AC019072.1-201ENST00000604535 1551 ntBASIC10.05□□□□□ -0.8
RTN4Q9NQC3 DIS3L-201ENST00000319194 3763 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
RTN4Q9NQC3 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC10.04□□□□□ -0.8
RTN4Q9NQC3 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC10.04□□□□□ -0.8
RTN4Q9NQC3 ANKRD20A21P-202ENST00000623715 3588 ntBASIC10.04□□□□□ -0.8
RTN4Q9NQC3 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
RTN4Q9NQC3 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
RTN4Q9NQC3 ZCCHC2-204ENST00000586834 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
RTN4Q9NQC3 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
RTN4Q9NQC3 ZNF225-204ENST00000590612 2404 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
RTN4Q9NQC3 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC10.04□□□□□ -0.8
RTN4Q9NQC3 PXYLP1-204ENST00000504264 1773 ntTSL 2 BASIC10.04□□□□□ -0.8
RTN4Q9NQC3 RIPOR2-205ENST00000510784 3381 ntTSL 2 BASIC10.04□□□□□ -0.8
RTN4Q9NQC3 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
RTN4Q9NQC3 FAR2P1-201ENST00000325390 3679 ntTSL 5 BASIC10.04□□□□□ -0.8
RTN4Q9NQC3 TM2D2-203ENST00000456845 3295 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
RTN4Q9NQC3 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
RTN4Q9NQC3 BTF3-201ENST00000335895 897 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
RTN4Q9NQC3 CSN2-201ENST00000353151 1066 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 161.8 ms