Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 AP001284.1-201ENST00000528393 2118 ntBASIC4.04□□□□□ -1.76
SND1-IT1Q9HBX3 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SND1-IT1Q9HBX3 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
SND1-IT1Q9HBX3 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SND1-IT1Q9HBX3 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
SND1-IT1Q9HBX3 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SND1-IT1Q9HBX3 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC4.04□□□□□ -1.76
SND1-IT1Q9HBX3 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
SND1-IT1Q9HBX3 SLC2A3P4-201ENST00000521259 1471 ntBASIC4.04□□□□□ -1.76
SND1-IT1Q9HBX3 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC4.04□□□□□ -1.76
SND1-IT1Q9HBX3 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC4.04□□□□□ -1.76
SND1-IT1Q9HBX3 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SND1-IT1Q9HBX3 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
SND1-IT1Q9HBX3 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SND1-IT1Q9HBX3 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.04□□□□□ -1.76
SND1-IT1Q9HBX3 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 AL034546.1-201ENST00000623740 3693 ntBASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 ALB-202ENST00000401494 1659 ntTSL 5 BASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 AL136984.1-201ENST00000607611 1893 ntBASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 TINAG-202ENST00000370864 692 ntTSL 2 BASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 U3.23-201ENST00000391132 200 ntBASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 NPM1P37-201ENST00000403105 874 ntBASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 AC234781.4-201ENST00000419384 244 ntBASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 FNDC3B-205ENST00000423424 408 ntTSL 3 BASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 RPL7AP14-201ENST00000424041 802 ntBASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 AC083862.1-201ENST00000427378 1242 ntBASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 TRBV29OR9-2-201ENST00000427589 333 ntBASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 OR52U1P-201ENST00000439752 923 ntBASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 CUBNP2-201ENST00000443534 1139 ntBASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 AL020997.1-201ENST00000446554 349 ntBASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 AKR1D1P1-201ENST00000457236 936 ntBASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 RN7SKP198-201ENST00000459286 306 ntBASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 TRBV8-1-201ENST00000481590 279 ntBASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 AC093870.1-201ENST00000506837 213 ntBASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 VDAC3-206ENST00000521158 949 ntAPPRIS ALT1 TSL 5 BASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 AC244502.2-201ENST00000543361 851 ntBASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 AC092865.1-201ENST00000544395 1023 ntBASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 AP000619.2-201ENST00000546014 969 ntBASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 AC005332.4-201ENST00000592752 579 ntBASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 QTRT1P1-201ENST00000604344 1078 ntBASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 LSM1P2-201ENST00000604911 322 ntBASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 AL137000.1-201ENST00000610528 1244 ntBASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 AL136097.3-201ENST00000611097 505 ntBASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 AC022325.1-201ENST00000502748 2199 ntBASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
SND1-IT1Q9HBX3 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC4.03□□□□□ -1.77
SND1-IT1Q9HBX3 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 AC005261.6-201ENST00000623072 1387 ntBASIC4.02□□□□□ -1.77
SND1-IT1Q9HBX3 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 134.4 ms