Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 MIR138-2-201ENST00000384916 84 ntBASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 MIR27A-201ENST00000385073 78 ntBASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 AL589994.1-201ENST00000404962 340 ntBASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 ERMN-202ENST00000409216 746 ntTSL 4 BASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 RN7SKP137-201ENST00000411074 307 ntBASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 AC024937.2-201ENST00000411669 1242 ntBASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 AC245060.4-201ENST00000413293 1121 ntBASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 RAB9AP4-201ENST00000415230 609 ntBASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 MICG-208ENST00000416822 132 ntBASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 PTP4A1P5-201ENST00000420305 455 ntBASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 DEFB130D-201ENST00000426866 237 ntBASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 GAS5-211ENST00000432536 959 ntTSL 2 BASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 NMNAT1P2-201ENST00000435192 860 ntBASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 AL445567.1-201ENST00000439121 144 ntBASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 DNAJA1P5-201ENST00000440278 943 ntBASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 RPL31P20-201ENST00000449593 360 ntBASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 ST13P21-201ENST00000453250 1098 ntBASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 AP000805.1-201ENST00000471604 784 ntBASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 AC095057.1-201ENST00000507583 168 ntBASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 AC074087.1-201ENST00000512059 724 ntBASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 RNA5SP518-201ENST00000515957 119 ntBASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 SCARNA6-201ENST00000515982 265 ntBASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 RNA5SP116-201ENST00000516132 98 ntBASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 RNA5SP75-201ENST00000516841 111 ntBASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 OXR1-212ENST00000521592 993 ntTSL 5 BASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 NDUFA3P2-201ENST00000531434 232 ntBASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 MIR4800-201ENST00000537353 80 ntBASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 AC023080.1-201ENST00000551663 931 ntBASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 AC002069.2-201ENST00000603580 883 ntBASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 AC092960.1-201ENST00000604762 351 ntBASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 CYCSP1-201ENST00000604815 315 ntBASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 AC105129.3-201ENST00000605455 485 ntBASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 AC010245.2-201ENST00000606908 1167 ntBASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 AC104073.3-201ENST00000610942 955 ntBASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 AC073530.2-201ENST00000623987 261 ntBASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 AC005355.2-201ENST00000625064 484 ntBASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 KAT14-202ENST00000435364 3618 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 AC104837.1-201ENST00000444644 1587 ntBASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 TATDN2P3-201ENST00000452855 3665 ntBASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 AC125603.4-201ENST00000621942 2699 ntBASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SEC61A2Q9H9S3 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
SEC61A2Q9H9S3 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
SEC61A2Q9H9S3 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
SEC61A2Q9H9S3 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
SEC61A2Q9H9S3 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
SEC61A2Q9H9S3 AC084782.1-201ENST00000564401 2465 ntBASIC6.21□□□□□ -1.41
SEC61A2Q9H9S3 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SEC61A2Q9H9S3 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms