Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
AP1S3Q96PC3 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
AP1S3Q96PC3 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
AP1S3Q96PC3 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
AP1S3Q96PC3 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
AP1S3Q96PC3 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
AP1S3Q96PC3 SETP22-201ENST00000412243 957 ntBASIC4.52□□□□□ -1.69
AP1S3Q96PC3 AC079809.1-201ENST00000415468 276 ntBASIC4.52□□□□□ -1.69
AP1S3Q96PC3 YWHAZP5-201ENST00000419975 730 ntBASIC4.52□□□□□ -1.69
AP1S3Q96PC3 AL589794.1-201ENST00000424971 390 ntBASIC4.52□□□□□ -1.69
AP1S3Q96PC3 OR52S1P-201ENST00000427016 937 ntBASIC4.52□□□□□ -1.69
AP1S3Q96PC3 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.52□□□□□ -1.69
AP1S3Q96PC3 MGAT2P2-201ENST00000427194 797 ntBASIC4.52□□□□□ -1.69
AP1S3Q96PC3 VN1R53P-201ENST00000429536 957 ntBASIC4.52□□□□□ -1.69
AP1S3Q96PC3 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC4.52□□□□□ -1.69
AP1S3Q96PC3 RPL5P25-201ENST00000441148 775 ntBASIC4.52□□□□□ -1.69
AP1S3Q96PC3 AC239800.1-201ENST00000442049 719 ntBASIC4.52□□□□□ -1.69
AP1S3Q96PC3 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC4.52□□□□□ -1.69
AP1S3Q96PC3 AL139135.2-201ENST00000445040 433 ntBASIC4.52□□□□□ -1.69
AP1S3Q96PC3 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC4.52□□□□□ -1.69
AP1S3Q96PC3 AC022080.2-201ENST00000452932 533 ntBASIC4.52□□□□□ -1.69
AP1S3Q96PC3 RN7SL352P-201ENST00000466002 277 ntBASIC4.52□□□□□ -1.69
AP1S3Q96PC3 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
AP1S3Q96PC3 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC4.52□□□□□ -1.69
AP1S3Q96PC3 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC4.52□□□□□ -1.69
AP1S3Q96PC3 RN7SKP196-201ENST00000516267 345 ntBASIC4.52□□□□□ -1.69
AP1S3Q96PC3 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC4.52□□□□□ -1.69
AP1S3Q96PC3 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC4.52□□□□□ -1.69
AP1S3Q96PC3 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC4.52□□□□□ -1.69
AP1S3Q96PC3 AC005519.1-201ENST00000554490 601 ntBASIC4.52□□□□□ -1.69
AP1S3Q96PC3 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC4.52□□□□□ -1.69
AP1S3Q96PC3 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC4.52□□□□□ -1.69
AP1S3Q96PC3 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC4.52□□□□□ -1.69
AP1S3Q96PC3 AP005262.1-201ENST00000582646 997 ntBASIC4.52□□□□□ -1.69
AP1S3Q96PC3 NPIPB1P-202ENST00000588786 828 ntBASIC4.52□□□□□ -1.69
AP1S3Q96PC3 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC4.52□□□□□ -1.69
AP1S3Q96PC3 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC4.52□□□□□ -1.69
AP1S3Q96PC3 AC009283.1-201ENST00000615852 645 ntBASIC4.52□□□□□ -1.69
AP1S3Q96PC3 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
AP1S3Q96PC3 LINC02495-203ENST00000636704 242 ntBASIC4.52□□□□□ -1.69
AP1S3Q96PC3 AC099654.11-201ENST00000638857 294 ntBASIC4.52□□□□□ -1.69
AP1S3Q96PC3 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC4.52□□□□□ -1.69
AP1S3Q96PC3 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
AP1S3Q96PC3 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC4.52□□□□□ -1.69
AP1S3Q96PC3 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC4.52□□□□□ -1.69
AP1S3Q96PC3 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
AP1S3Q96PC3 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
AP1S3Q96PC3 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC4.52□□□□□ -1.69
AP1S3Q96PC3 EEF1A1P14-201ENST00000421195 1376 ntBASIC4.52□□□□□ -1.69
AP1S3Q96PC3 AC010132.4-201ENST00000569883 1368 ntBASIC4.52□□□□□ -1.69
AP1S3Q96PC3 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC4.52□□□□□ -1.69
AP1S3Q96PC3 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
AP1S3Q96PC3 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
AP1S3Q96PC3 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
AP1S3Q96PC3 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
AP1S3Q96PC3 SLC2A3P2-201ENST00000331747 1480 ntBASIC4.51□□□□□ -1.69
AP1S3Q96PC3 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
AP1S3Q96PC3 TCP1P3-201ENST00000414406 1498 ntBASIC4.51□□□□□ -1.69
AP1S3Q96PC3 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
AP1S3Q96PC3 AC116158.1-201ENST00000560231 2129 ntBASIC4.51□□□□□ -1.69
AP1S3Q96PC3 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
AP1S3Q96PC3 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC4.51□□□□□ -1.69
AP1S3Q96PC3 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
AP1S3Q96PC3 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
AP1S3Q96PC3 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
AP1S3Q96PC3 RGS5-202ENST00000367903 934 ntTSL 3 BASIC4.51□□□□□ -1.69
AP1S3Q96PC3 AL445213.1-201ENST00000412589 747 ntBASIC4.51□□□□□ -1.69
AP1S3Q96PC3 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC4.51□□□□□ -1.69
AP1S3Q96PC3 OR6C64P-201ENST00000419708 825 ntBASIC4.51□□□□□ -1.69
AP1S3Q96PC3 AP003385.1-201ENST00000426387 893 ntBASIC4.51□□□□□ -1.69
AP1S3Q96PC3 HSPE1P16-201ENST00000426640 348 ntBASIC4.51□□□□□ -1.69
AP1S3Q96PC3 AC138761.5-201ENST00000433967 325 ntBASIC4.51□□□□□ -1.69
AP1S3Q96PC3 AC073410.1-201ENST00000435125 589 ntBASIC4.51□□□□□ -1.69
AP1S3Q96PC3 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC4.51□□□□□ -1.69
AP1S3Q96PC3 KRT8P51-201ENST00000438938 274 ntBASIC4.51□□□□□ -1.69
AP1S3Q96PC3 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
AP1S3Q96PC3 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC4.51□□□□□ -1.69
AP1S3Q96PC3 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
AP1S3Q96PC3 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC4.51□□□□□ -1.69
AP1S3Q96PC3 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC4.51□□□□□ -1.69
AP1S3Q96PC3 AL133232.1-201ENST00000458293 483 ntTSL 5 BASIC4.51□□□□□ -1.69
AP1S3Q96PC3 RN7SKP198-201ENST00000459286 306 ntBASIC4.51□□□□□ -1.69
AP1S3Q96PC3 CBX5P1-201ENST00000468470 561 ntBASIC4.51□□□□□ -1.69
AP1S3Q96PC3 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC4.51□□□□□ -1.69
AP1S3Q96PC3 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC4.51□□□□□ -1.69
AP1S3Q96PC3 AC008945.1-201ENST00000505144 499 ntBASIC4.51□□□□□ -1.69
AP1S3Q96PC3 AC114940.1-201ENST00000512162 1265 ntBASIC4.51□□□□□ -1.69
AP1S3Q96PC3 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC4.51□□□□□ -1.69
AP1S3Q96PC3 AP004609.2-201ENST00000532177 190 ntBASIC4.51□□□□□ -1.69
AP1S3Q96PC3 VDAC2P2-201ENST00000544463 901 ntBASIC4.51□□□□□ -1.69
AP1S3Q96PC3 AC069234.3-201ENST00000544939 569 ntTSL 4 BASIC4.51□□□□□ -1.69
AP1S3Q96PC3 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC4.51□□□□□ -1.69
AP1S3Q96PC3 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
AP1S3Q96PC3 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC4.51□□□□□ -1.69
AP1S3Q96PC3 AL049779.3-201ENST00000557141 606 ntBASIC4.51□□□□□ -1.69
AP1S3Q96PC3 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC4.51□□□□□ -1.69
AP1S3Q96PC3 AC010287.1-201ENST00000566916 357 ntBASIC4.51□□□□□ -1.69
AP1S3Q96PC3 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC4.51□□□□□ -1.69
AP1S3Q96PC3 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC4.51□□□□□ -1.69
AP1S3Q96PC3 AC020916.2-201ENST00000591242 360 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms