Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
COL21A1Q96P44 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.75□□□□□ -1.49
COL21A1Q96P44 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
COL21A1Q96P44 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
COL21A1Q96P44 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.74□□□□□ -1.49
COL21A1Q96P44 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
COL21A1Q96P44 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
COL21A1Q96P44 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
COL21A1Q96P44 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
COL21A1Q96P44 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.74□□□□□ -1.49
COL21A1Q96P44 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
COL21A1Q96P44 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.74□□□□□ -1.49
COL21A1Q96P44 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
COL21A1Q96P44 SNORD1C-201ENST00000363315 78 ntBASIC5.74□□□□□ -1.49
COL21A1Q96P44 RNU1-49P-201ENST00000363468 159 ntBASIC5.74□□□□□ -1.49
COL21A1Q96P44 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
COL21A1Q96P44 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.74□□□□□ -1.49
COL21A1Q96P44 YWHAZP6-201ENST00000399764 738 ntBASIC5.74□□□□□ -1.49
COL21A1Q96P44 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.74□□□□□ -1.49
COL21A1Q96P44 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC5.74□□□□□ -1.49
COL21A1Q96P44 KATNBL1P2-201ENST00000433311 835 ntBASIC5.74□□□□□ -1.49
COL21A1Q96P44 GAPDHP59-201ENST00000435908 267 ntBASIC5.74□□□□□ -1.49
COL21A1Q96P44 PCNPP2-201ENST00000441651 455 ntBASIC5.74□□□□□ -1.49
COL21A1Q96P44 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.74□□□□□ -1.49
COL21A1Q96P44 GAPDHP23-201ENST00000444823 993 ntBASIC5.74□□□□□ -1.49
COL21A1Q96P44 EEF1B2P3-201ENST00000447718 678 ntBASIC5.74□□□□□ -1.49
COL21A1Q96P44 RPL12P30-201ENST00000488389 499 ntBASIC5.74□□□□□ -1.49
COL21A1Q96P44 AP002453.1-201ENST00000492327 668 ntBASIC5.74□□□□□ -1.49
COL21A1Q96P44 SNX18P24-201ENST00000505249 671 ntBASIC5.74□□□□□ -1.49
COL21A1Q96P44 AC112484.3-201ENST00000505910 329 ntBASIC5.74□□□□□ -1.49
COL21A1Q96P44 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC5.74□□□□□ -1.49
COL21A1Q96P44 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.74□□□□□ -1.49
COL21A1Q96P44 CYP4F27P-201ENST00000514557 494 ntBASIC5.74□□□□□ -1.49
COL21A1Q96P44 RN7SKP183-201ENST00000517169 324 ntBASIC5.74□□□□□ -1.49
COL21A1Q96P44 AP001858.2-201ENST00000536213 601 ntBASIC5.74□□□□□ -1.49
COL21A1Q96P44 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
COL21A1Q96P44 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.74□□□□□ -1.49
COL21A1Q96P44 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.74□□□□□ -1.49
COL21A1Q96P44 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.74□□□□□ -1.49
COL21A1Q96P44 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC5.74□□□□□ -1.49
COL21A1Q96P44 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.74□□□□□ -1.49
COL21A1Q96P44 MIR132-201ENST00000591554 101 ntBASIC5.74□□□□□ -1.49
COL21A1Q96P44 SMIM12P1-201ENST00000603004 274 ntBASIC5.74□□□□□ -1.49
COL21A1Q96P44 AL359091.2-201ENST00000609303 556 ntBASIC5.74□□□□□ -1.49
COL21A1Q96P44 uc_338.31-201ENST00000615595 186 ntBASIC5.74□□□□□ -1.49
COL21A1Q96P44 AL137067.2-201ENST00000621202 131 ntBASIC5.74□□□□□ -1.49
COL21A1Q96P44 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.74□□□□□ -1.49
COL21A1Q96P44 PPBPP2-201ENST00000513150 1362 ntBASIC5.74□□□□□ -1.49
COL21A1Q96P44 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
COL21A1Q96P44 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
COL21A1Q96P44 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
COL21A1Q96P44 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
COL21A1Q96P44 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
COL21A1Q96P44 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
COL21A1Q96P44 AC140134.1-201ENST00000511830 3544 ntBASIC5.74□□□□□ -1.49
COL21A1Q96P44 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
COL21A1Q96P44 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
COL21A1Q96P44 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
COL21A1Q96P44 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.74□□□□□ -1.49
COL21A1Q96P44 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.74□□□□□ -1.49
COL21A1Q96P44 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.74□□□□□ -1.49
COL21A1Q96P44 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.73□□□□□ -1.49
COL21A1Q96P44 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.73□□□□□ -1.49
COL21A1Q96P44 RNA5SP232-201ENST00000364144 119 ntBASIC5.73□□□□□ -1.49
COL21A1Q96P44 RN7SKP171-201ENST00000364417 303 ntBASIC5.73□□□□□ -1.49
COL21A1Q96P44 SNORA11.3-201ENST00000408471 128 ntBASIC5.73□□□□□ -1.49
COL21A1Q96P44 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.73□□□□□ -1.49
COL21A1Q96P44 AC092865.3-201ENST00000425390 1026 ntBASIC5.73□□□□□ -1.49
COL21A1Q96P44 AC108479.1-201ENST00000431142 427 ntBASIC5.73□□□□□ -1.49
COL21A1Q96P44 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.73□□□□□ -1.49
COL21A1Q96P44 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.73□□□□□ -1.49
COL21A1Q96P44 RAB28P2-201ENST00000454299 641 ntBASIC5.73□□□□□ -1.49
COL21A1Q96P44 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.73□□□□□ -1.49
COL21A1Q96P44 RN7SL254P-201ENST00000460609 284 ntBASIC5.73□□□□□ -1.49
COL21A1Q96P44 AC093719.1-201ENST00000480427 441 ntBASIC5.73□□□□□ -1.49
COL21A1Q96P44 RPL34P33-201ENST00000486062 334 ntBASIC5.73□□□□□ -1.49
COL21A1Q96P44 Y_RNA.710-201ENST00000516975 110 ntBASIC5.73□□□□□ -1.49
COL21A1Q96P44 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.73□□□□□ -1.49
COL21A1Q96P44 AC036111.2-201ENST00000533247 901 ntBASIC5.73□□□□□ -1.49
COL21A1Q96P44 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
COL21A1Q96P44 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.73□□□□□ -1.49
COL21A1Q96P44 NPM1P42-201ENST00000560329 862 ntBASIC5.73□□□□□ -1.49
COL21A1Q96P44 MIR3154-201ENST00000577829 84 ntBASIC5.73□□□□□ -1.49
COL21A1Q96P44 RNU4ATAC-201ENST00000580972 127 ntBASIC5.73□□□□□ -1.49
COL21A1Q96P44 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
COL21A1Q96P44 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.73□□□□□ -1.49
COL21A1Q96P44 OR7A8P-201ENST00000595427 913 ntBASIC5.73□□□□□ -1.49
COL21A1Q96P44 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC5.73□□□□□ -1.49
COL21A1Q96P44 AP001823.1-201ENST00000604056 1003 ntBASIC5.73□□□□□ -1.49
COL21A1Q96P44 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.73□□□□□ -1.49
COL21A1Q96P44 AC016590.3-201ENST00000611171 753 ntBASIC5.73□□□□□ -1.49
COL21A1Q96P44 MIR6721-201ENST00000617181 87 ntBASIC5.73□□□□□ -1.49
COL21A1Q96P44 SNORA11.6-201ENST00000619030 128 ntBASIC5.73□□□□□ -1.49
COL21A1Q96P44 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.73□□□□□ -1.49
COL21A1Q96P44 CASC19-274ENST00000642018 970 ntBASIC5.73□□□□□ -1.49
COL21A1Q96P44 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
COL21A1Q96P44 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
COL21A1Q96P44 AL133243.2-201ENST00000610331 1621 ntBASIC5.73□□□□□ -1.49
COL21A1Q96P44 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
COL21A1Q96P44 AC024651.2-201ENST00000562480 2098 ntBASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms