Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
ECHDC3Q96DC8 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
ECHDC3Q96DC8 VN1R110P-201ENST00000438988 971 ntBASIC6.06□□□□□ -1.44
ECHDC3Q96DC8 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC6.06□□□□□ -1.44
ECHDC3Q96DC8 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
ECHDC3Q96DC8 AC023245.1-201ENST00000468501 517 ntBASIC6.06□□□□□ -1.44
ECHDC3Q96DC8 AC117394.1-201ENST00000477323 567 ntBASIC6.06□□□□□ -1.44
ECHDC3Q96DC8 RPL23AP40-201ENST00000487630 390 ntBASIC6.06□□□□□ -1.44
ECHDC3Q96DC8 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.06□□□□□ -1.44
ECHDC3Q96DC8 B4GALNT2P1-201ENST00000508857 307 ntBASIC6.06□□□□□ -1.44
ECHDC3Q96DC8 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.06□□□□□ -1.44
ECHDC3Q96DC8 AC008429.4-201ENST00000521201 182 ntBASIC6.06□□□□□ -1.44
ECHDC3Q96DC8 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.06□□□□□ -1.44
ECHDC3Q96DC8 ASB8-203ENST00000535988 679 ntTSL 2 BASIC6.06□□□□□ -1.44
ECHDC3Q96DC8 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC6.06□□□□□ -1.44
ECHDC3Q96DC8 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.06□□□□□ -1.44
ECHDC3Q96DC8 AC007494.1-201ENST00000562293 760 ntBASIC6.06□□□□□ -1.44
ECHDC3Q96DC8 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.06□□□□□ -1.44
ECHDC3Q96DC8 AC005726.4-201ENST00000582858 458 ntBASIC6.06□□□□□ -1.44
ECHDC3Q96DC8 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.06□□□□□ -1.44
ECHDC3Q96DC8 AC012254.3-201ENST00000591183 2117 ntBASIC6.06□□□□□ -1.44
ECHDC3Q96DC8 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC6.06□□□□□ -1.44
ECHDC3Q96DC8 AC018690.1-201ENST00000608144 626 ntBASIC6.06□□□□□ -1.44
ECHDC3Q96DC8 AL136097.3-201ENST00000611097 505 ntBASIC6.06□□□□□ -1.44
ECHDC3Q96DC8 MIR6793-201ENST00000612376 63 ntBASIC6.06□□□□□ -1.44
ECHDC3Q96DC8 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC6.06□□□□□ -1.44
ECHDC3Q96DC8 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
ECHDC3Q96DC8 BRAFP1-201ENST00000445336 2703 ntBASIC6.06□□□□□ -1.44
ECHDC3Q96DC8 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
ECHDC3Q96DC8 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.06□□□□□ -1.44
ECHDC3Q96DC8 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.06□□□□□ -1.44
ECHDC3Q96DC8 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.06□□□□□ -1.44
ECHDC3Q96DC8 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
ECHDC3Q96DC8 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.06□□□□□ -1.44
ECHDC3Q96DC8 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
ECHDC3Q96DC8 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
ECHDC3Q96DC8 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
ECHDC3Q96DC8 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.05□□□□□ -1.44
ECHDC3Q96DC8 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
ECHDC3Q96DC8 EEF1A1P21-201ENST00000512363 1344 ntBASIC6.05□□□□□ -1.44
ECHDC3Q96DC8 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
ECHDC3Q96DC8 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
ECHDC3Q96DC8 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
ECHDC3Q96DC8 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
ECHDC3Q96DC8 OR10R3P-201ENST00000361688 942 ntBASIC6.05□□□□□ -1.44
ECHDC3Q96DC8 RNA5SP273-201ENST00000362484 113 ntBASIC6.05□□□□□ -1.44
ECHDC3Q96DC8 RNA5SP477-201ENST00000362639 119 ntBASIC6.05□□□□□ -1.44
ECHDC3Q96DC8 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
ECHDC3Q96DC8 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC6.05□□□□□ -1.44
ECHDC3Q96DC8 AC066692.1-201ENST00000421721 457 ntBASIC6.05□□□□□ -1.44
ECHDC3Q96DC8 NMD3P2-201ENST00000421815 761 ntBASIC6.05□□□□□ -1.44
ECHDC3Q96DC8 KIF4CP-201ENST00000422742 1279 ntBASIC6.05□□□□□ -1.44
ECHDC3Q96DC8 AC245884.2-201ENST00000426257 404 ntBASIC6.05□□□□□ -1.44
ECHDC3Q96DC8 AC016027.5-201ENST00000427227 210 ntBASIC6.05□□□□□ -1.44
ECHDC3Q96DC8 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC6.05□□□□□ -1.44
ECHDC3Q96DC8 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC6.05□□□□□ -1.44
ECHDC3Q96DC8 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.05□□□□□ -1.44
ECHDC3Q96DC8 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC6.05□□□□□ -1.44
ECHDC3Q96DC8 NDUFA5P5-201ENST00000468361 342 ntBASIC6.05□□□□□ -1.44
ECHDC3Q96DC8 RN7SL193P-201ENST00000491708 276 ntBASIC6.05□□□□□ -1.44
ECHDC3Q96DC8 AC083795.1-201ENST00000491760 320 ntBASIC6.05□□□□□ -1.44
ECHDC3Q96DC8 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.05□□□□□ -1.44
ECHDC3Q96DC8 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.05□□□□□ -1.44
ECHDC3Q96DC8 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.05□□□□□ -1.44
ECHDC3Q96DC8 AC060775.1-201ENST00000518241 520 ntBASIC6.05□□□□□ -1.44
ECHDC3Q96DC8 NANOGNBP2-201ENST00000544753 553 ntBASIC6.05□□□□□ -1.44
ECHDC3Q96DC8 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
ECHDC3Q96DC8 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.05□□□□□ -1.44
ECHDC3Q96DC8 AC004890.3-201ENST00000605566 1095 ntBASIC6.05□□□□□ -1.44
ECHDC3Q96DC8 MIR6778-201ENST00000617912 73 ntBASIC6.05□□□□□ -1.44
ECHDC3Q96DC8 AL359742.1-201ENST00000622497 540 ntBASIC6.05□□□□□ -1.44
ECHDC3Q96DC8 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC6.05□□□□□ -1.44
ECHDC3Q96DC8 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC6.05□□□□□ -1.44
ECHDC3Q96DC8 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.05□□□□□ -1.44
ECHDC3Q96DC8 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
ECHDC3Q96DC8 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
ECHDC3Q96DC8 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
ECHDC3Q96DC8 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
ECHDC3Q96DC8 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
ECHDC3Q96DC8 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
ECHDC3Q96DC8 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.05□□□□□ -1.44
ECHDC3Q96DC8 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
ECHDC3Q96DC8 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
ECHDC3Q96DC8 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.04□□□□□ -1.44
ECHDC3Q96DC8 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.04□□□□□ -1.44
ECHDC3Q96DC8 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC6.04□□□□□ -1.44
ECHDC3Q96DC8 SLC9B1P1-201ENST00000331172 1337 ntBASIC6.04□□□□□ -1.44
ECHDC3Q96DC8 AL117378.2-201ENST00000622916 1337 ntBASIC6.04□□□□□ -1.44
ECHDC3Q96DC8 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.04□□□□□ -1.44
ECHDC3Q96DC8 BX284613.1-201ENST00000452221 1641 ntBASIC6.04□□□□□ -1.44
ECHDC3Q96DC8 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.04□□□□□ -1.44
ECHDC3Q96DC8 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
ECHDC3Q96DC8 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.04□□□□□ -1.44
ECHDC3Q96DC8 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
ECHDC3Q96DC8 SUGT1P2-201ENST00000379452 992 ntBASIC6.04□□□□□ -1.44
ECHDC3Q96DC8 AL354890.1-201ENST00000413730 346 ntBASIC6.04□□□□□ -1.44
ECHDC3Q96DC8 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.04□□□□□ -1.44
ECHDC3Q96DC8 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
ECHDC3Q96DC8 AC115283.1-201ENST00000427353 400 ntBASIC6.04□□□□□ -1.44
ECHDC3Q96DC8 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 150 ms