Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LRRC58Q96CX6 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
LRRC58Q96CX6 SNORD94-201ENST00000386037 137 ntBASIC5.7□□□□□ -1.5
LRRC58Q96CX6 GGA1-205ENST00000405147 575 ntTSL 4 BASIC5.7□□□□□ -1.5
LRRC58Q96CX6 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.7□□□□□ -1.5
LRRC58Q96CX6 BX276092.6-201ENST00000430476 250 ntBASIC5.7□□□□□ -1.5
LRRC58Q96CX6 HSPE1P27-201ENST00000430808 296 ntBASIC5.7□□□□□ -1.5
LRRC58Q96CX6 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
LRRC58Q96CX6 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.7□□□□□ -1.5
LRRC58Q96CX6 OR2L9P-201ENST00000444456 913 ntBASIC5.7□□□□□ -1.5
LRRC58Q96CX6 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC5.7□□□□□ -1.5
LRRC58Q96CX6 RPL12P39-201ENST00000455456 496 ntBASIC5.7□□□□□ -1.5
LRRC58Q96CX6 BX276092.8-201ENST00000455722 250 ntBASIC5.7□□□□□ -1.5
LRRC58Q96CX6 AC004890.1-201ENST00000461005 181 ntBASIC5.7□□□□□ -1.5
LRRC58Q96CX6 RN7SL83P-201ENST00000468131 297 ntBASIC5.7□□□□□ -1.5
LRRC58Q96CX6 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LRRC58Q96CX6 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC5.7□□□□□ -1.5
LRRC58Q96CX6 OR51A1P-201ENST00000511110 946 ntBASIC5.7□□□□□ -1.5
LRRC58Q96CX6 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LRRC58Q96CX6 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC5.7□□□□□ -1.5
LRRC58Q96CX6 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.7□□□□□ -1.5
LRRC58Q96CX6 OR8Q1P-201ENST00000526467 655 ntBASIC5.7□□□□□ -1.5
LRRC58Q96CX6 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.7□□□□□ -1.5
LRRC58Q96CX6 AC126615.2-201ENST00000553003 515 ntBASIC5.7□□□□□ -1.5
LRRC58Q96CX6 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.7□□□□□ -1.5
LRRC58Q96CX6 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.7□□□□□ -1.5
LRRC58Q96CX6 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.7□□□□□ -1.5
LRRC58Q96CX6 AL133481.2-203ENST00000607558 139 ntBASIC5.7□□□□□ -1.5
LRRC58Q96CX6 uc_338.26-201ENST00000612659 160 ntBASIC5.7□□□□□ -1.5
LRRC58Q96CX6 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC5.7□□□□□ -1.5
LRRC58Q96CX6 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.7□□□□□ -1.5
LRRC58Q96CX6 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC5.7□□□□□ -1.5
LRRC58Q96CX6 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC5.7□□□□□ -1.5
LRRC58Q96CX6 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.7□□□□□ -1.5
LRRC58Q96CX6 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC5.7□□□□□ -1.5
LRRC58Q96CX6 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LRRC58Q96CX6 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.7□□□□□ -1.5
LRRC58Q96CX6 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
LRRC58Q96CX6 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LRRC58Q96CX6 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
LRRC58Q96CX6 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC5.69□□□□□ -1.5
LRRC58Q96CX6 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.69□□□□□ -1.5
LRRC58Q96CX6 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LRRC58Q96CX6 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
LRRC58Q96CX6 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
LRRC58Q96CX6 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LRRC58Q96CX6 OFD1P17-201ENST00000437639 3018 ntBASIC5.69□□□□□ -1.5
LRRC58Q96CX6 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
LRRC58Q96CX6 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.69□□□□□ -1.5
LRRC58Q96CX6 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.69□□□□□ -1.5
LRRC58Q96CX6 GPN3P1-201ENST00000423883 535 ntBASIC5.69□□□□□ -1.5
LRRC58Q96CX6 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.69□□□□□ -1.5
LRRC58Q96CX6 RPL5P2-201ENST00000429598 854 ntBASIC5.69□□□□□ -1.5
LRRC58Q96CX6 AL445991.1-201ENST00000450381 475 ntBASIC5.69□□□□□ -1.5
LRRC58Q96CX6 AL034369.1-201ENST00000453808 477 ntBASIC5.69□□□□□ -1.5
LRRC58Q96CX6 RN7SL104P-201ENST00000498686 293 ntBASIC5.69□□□□□ -1.5
LRRC58Q96CX6 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.69□□□□□ -1.5
LRRC58Q96CX6 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC5.69□□□□□ -1.5
LRRC58Q96CX6 CYCSP25-201ENST00000525280 316 ntBASIC5.69□□□□□ -1.5
LRRC58Q96CX6 AC090424.1-201ENST00000535243 736 ntBASIC5.69□□□□□ -1.5
LRRC58Q96CX6 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC5.69□□□□□ -1.5
LRRC58Q96CX6 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC5.69□□□□□ -1.5
LRRC58Q96CX6 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC5.69□□□□□ -1.5
LRRC58Q96CX6 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC5.69□□□□□ -1.5
LRRC58Q96CX6 ZNF322P1-201ENST00000568013 1209 ntBASIC5.69□□□□□ -1.5
LRRC58Q96CX6 AL163952.1-202ENST00000569625 600 ntBASIC5.69□□□□□ -1.5
LRRC58Q96CX6 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.69□□□□□ -1.5
LRRC58Q96CX6 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.69□□□□□ -1.5
LRRC58Q96CX6 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC5.69□□□□□ -1.5
LRRC58Q96CX6 AC096708.4-201ENST00000620563 552 ntBASIC5.69□□□□□ -1.5
LRRC58Q96CX6 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.69□□□□□ -1.5
LRRC58Q96CX6 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LRRC58Q96CX6 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
LRRC58Q96CX6 CASC19-246ENST00000641625 1606 ntBASIC5.69□□□□□ -1.5
LRRC58Q96CX6 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
LRRC58Q96CX6 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LRRC58Q96CX6 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LRRC58Q96CX6 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
LRRC58Q96CX6 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
LRRC58Q96CX6 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
LRRC58Q96CX6 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.68□□□□□ -1.5
LRRC58Q96CX6 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
LRRC58Q96CX6 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
LRRC58Q96CX6 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LRRC58Q96CX6 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.68□□□□□ -1.5
LRRC58Q96CX6 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LRRC58Q96CX6 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
LRRC58Q96CX6 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.68□□□□□ -1.5
LRRC58Q96CX6 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LRRC58Q96CX6 OR10R3P-201ENST00000361688 942 ntBASIC5.68□□□□□ -1.5
LRRC58Q96CX6 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.68□□□□□ -1.5
LRRC58Q96CX6 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LRRC58Q96CX6 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC5.68□□□□□ -1.5
LRRC58Q96CX6 OSTCP4-201ENST00000424397 449 ntBASIC5.68□□□□□ -1.5
LRRC58Q96CX6 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC5.68□□□□□ -1.5
LRRC58Q96CX6 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.68□□□□□ -1.5
LRRC58Q96CX6 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LRRC58Q96CX6 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LRRC58Q96CX6 CXCR2P1-202ENST00000443392 1074 ntBASIC5.68□□□□□ -1.5
LRRC58Q96CX6 AC073072.2-201ENST00000447425 348 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms