Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CHMP4CQ96CF2 RN7SKP161-201ENST00000411110 305 ntBASIC7.59□□□□□ -1.19
CHMP4CQ96CF2 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC7.59□□□□□ -1.19
CHMP4CQ96CF2 EEF1B2P8-201ENST00000414101 671 ntBASIC7.59□□□□□ -1.19
CHMP4CQ96CF2 HMGA1P8-201ENST00000414130 321 ntBASIC7.59□□□□□ -1.19
CHMP4CQ96CF2 AC013470.3-201ENST00000420252 1194 ntBASIC7.59□□□□□ -1.19
CHMP4CQ96CF2 AC007568.1-201ENST00000422912 471 ntBASIC7.59□□□□□ -1.19
CHMP4CQ96CF2 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC7.59□□□□□ -1.19
CHMP4CQ96CF2 AC115283.1-201ENST00000427353 400 ntBASIC7.59□□□□□ -1.19
CHMP4CQ96CF2 RPL34P27-201ENST00000428810 349 ntBASIC7.59□□□□□ -1.19
CHMP4CQ96CF2 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC7.59□□□□□ -1.19
CHMP4CQ96CF2 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CHMP4CQ96CF2 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC7.59□□□□□ -1.19
CHMP4CQ96CF2 OR9N1P-201ENST00000491296 333 ntBASIC7.59□□□□□ -1.19
CHMP4CQ96CF2 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC7.59□□□□□ -1.19
CHMP4CQ96CF2 RNU6-760P-201ENST00000516078 97 ntBASIC7.59□□□□□ -1.19
CHMP4CQ96CF2 RNA5SP206-201ENST00000516703 121 ntBASIC7.59□□□□□ -1.19
CHMP4CQ96CF2 SUMO2P19-201ENST00000518920 295 ntBASIC7.59□□□□□ -1.19
CHMP4CQ96CF2 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC7.59□□□□□ -1.19
CHMP4CQ96CF2 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC7.59□□□□□ -1.19
CHMP4CQ96CF2 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC7.59□□□□□ -1.19
CHMP4CQ96CF2 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC7.59□□□□□ -1.19
CHMP4CQ96CF2 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC7.59□□□□□ -1.19
CHMP4CQ96CF2 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC7.59□□□□□ -1.19
CHMP4CQ96CF2 AC023968.1-201ENST00000560719 475 ntBASIC7.59□□□□□ -1.19
CHMP4CQ96CF2 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CHMP4CQ96CF2 MTND2P13-201ENST00000577438 1039 ntBASIC7.59□□□□□ -1.19
CHMP4CQ96CF2 GLYATL1P2-202ENST00000588046 902 ntBASIC7.59□□□□□ -1.19
CHMP4CQ96CF2 AC004805.3-201ENST00000603178 310 ntBASIC7.59□□□□□ -1.19
CHMP4CQ96CF2 RPSAP75-201ENST00000605848 301 ntBASIC7.59□□□□□ -1.19
CHMP4CQ96CF2 AC084036.1-201ENST00000609190 508 ntBASIC7.59□□□□□ -1.19
CHMP4CQ96CF2 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CHMP4CQ96CF2 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC7.59□□□□□ -1.19
CHMP4CQ96CF2 AC111152.1-202ENST00000635848 339 ntBASIC7.59□□□□□ -1.19
CHMP4CQ96CF2 LINC02495-203ENST00000636704 242 ntBASIC7.59□□□□□ -1.19
CHMP4CQ96CF2 AC119674.1-220ENST00000641502 1048 ntBASIC7.59□□□□□ -1.19
CHMP4CQ96CF2 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
CHMP4CQ96CF2 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC7.59□□□□□ -1.19
CHMP4CQ96CF2 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CHMP4CQ96CF2 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CHMP4CQ96CF2 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC7.59□□□□□ -1.19
CHMP4CQ96CF2 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CHMP4CQ96CF2 AC114876.1-201ENST00000490962 1366 ntBASIC7.59□□□□□ -1.2
CHMP4CQ96CF2 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC7.58□□□□□ -1.2
CHMP4CQ96CF2 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CHMP4CQ96CF2 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CHMP4CQ96CF2 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
CHMP4CQ96CF2 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
CHMP4CQ96CF2 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CHMP4CQ96CF2 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CHMP4CQ96CF2 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC7.58□□□□□ -1.2
CHMP4CQ96CF2 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CHMP4CQ96CF2 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
CHMP4CQ96CF2 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CHMP4CQ96CF2 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CHMP4CQ96CF2 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
CHMP4CQ96CF2 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CHMP4CQ96CF2 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CHMP4CQ96CF2 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC7.58□□□□□ -1.2
CHMP4CQ96CF2 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
CHMP4CQ96CF2 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC7.58□□□□□ -1.2
CHMP4CQ96CF2 CXADRP1-201ENST00000398098 1095 ntBASIC7.58□□□□□ -1.2
CHMP4CQ96CF2 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC7.58□□□□□ -1.2
CHMP4CQ96CF2 RN7SKP86-201ENST00000410454 332 ntBASIC7.58□□□□□ -1.2
CHMP4CQ96CF2 AL360013.1-201ENST00000419031 858 ntBASIC7.58□□□□□ -1.2
CHMP4CQ96CF2 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC7.58□□□□□ -1.2
CHMP4CQ96CF2 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC7.58□□□□□ -1.2
CHMP4CQ96CF2 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CHMP4CQ96CF2 RPS15AP29-201ENST00000445539 400 ntBASIC7.58□□□□□ -1.2
CHMP4CQ96CF2 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC7.58□□□□□ -1.2
CHMP4CQ96CF2 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC7.58□□□□□ -1.2
CHMP4CQ96CF2 RN7SL552P-201ENST00000462094 276 ntBASIC7.58□□□□□ -1.2
CHMP4CQ96CF2 AC135999.1-201ENST00000478962 479 ntBASIC7.58□□□□□ -1.2
CHMP4CQ96CF2 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC7.58□□□□□ -1.2
CHMP4CQ96CF2 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
CHMP4CQ96CF2 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC7.58□□□□□ -1.2
CHMP4CQ96CF2 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC7.58□□□□□ -1.2
CHMP4CQ96CF2 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC7.58□□□□□ -1.2
CHMP4CQ96CF2 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC7.58□□□□□ -1.2
CHMP4CQ96CF2 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC7.58□□□□□ -1.2
CHMP4CQ96CF2 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC7.58□□□□□ -1.2
CHMP4CQ96CF2 AC073111.2-201ENST00000605657 1075 ntBASIC7.58□□□□□ -1.2
CHMP4CQ96CF2 AL359091.2-201ENST00000609303 556 ntBASIC7.58□□□□□ -1.2
CHMP4CQ96CF2 CXADRP3-202ENST00000617265 1100 ntBASIC7.58□□□□□ -1.2
CHMP4CQ96CF2 AC026367.3-201ENST00000619032 590 ntBASIC7.58□□□□□ -1.2
CHMP4CQ96CF2 AL356490.1-201ENST00000623079 479 ntBASIC7.58□□□□□ -1.2
CHMP4CQ96CF2 AC020978.9-201ENST00000624380 1141 ntBASIC7.58□□□□□ -1.2
CHMP4CQ96CF2 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
CHMP4CQ96CF2 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
CHMP4CQ96CF2 AC011369.2-201ENST00000624423 1567 ntBASIC7.58□□□□□ -1.2
CHMP4CQ96CF2 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
CHMP4CQ96CF2 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC7.58□□□□□ -1.2
CHMP4CQ96CF2 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
CHMP4CQ96CF2 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC7.58□□□□□ -1.2
CHMP4CQ96CF2 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC7.58□□□□□ -1.2
CHMP4CQ96CF2 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CHMP4CQ96CF2 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC7.57□□□□□ -1.2
CHMP4CQ96CF2 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
CHMP4CQ96CF2 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
CHMP4CQ96CF2 SAGE3P-201ENST00000619800 1635 ntBASIC7.57□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms