Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 RPL23AP77-201ENST00000588044 463 ntBASIC8.3□□□□□ -1.08
HLA-CQ95604 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC8.3□□□□□ -1.08
HLA-CQ95604 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC8.3□□□□□ -1.08
HLA-CQ95604 RNU6-88P-201ENST00000606801 100 ntBASIC8.3□□□□□ -1.08
HLA-CQ95604 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC8.3□□□□□ -1.08
HLA-CQ95604 AL365204.3-201ENST00000612448 685 ntBASIC8.3□□□□□ -1.08
HLA-CQ95604 XPNPEP3-206ENST00000614001 230 ntTSL 5 BASIC8.3□□□□□ -1.08
HLA-CQ95604 TUG1_3.1-201ENST00000616187 237 ntBASIC8.3□□□□□ -1.08
HLA-CQ95604 AC010205.1-201ENST00000616668 449 ntBASIC8.3□□□□□ -1.08
HLA-CQ95604 AL589666.2-201ENST00000624603 618 ntBASIC8.3□□□□□ -1.08
HLA-CQ95604 AC091953.4-201ENST00000625179 341 ntBASIC8.3□□□□□ -1.08
HLA-CQ95604 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
HLA-CQ95604 OTUB2-201ENST00000203664 3922 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
HLA-CQ95604 NEDD4L-201ENST00000256830 2920 ntTSL 5 BASIC8.3□□□□□ -1.08
HLA-CQ95604 ELP3-201ENST00000256398 3452 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
HLA-CQ95604 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC8.3□□□□□ -1.08
HLA-CQ95604 CSMD1-218ENST00000635120 11737 ntAPPRIS P2 TSL 5 BASIC8.3□□□□□ -1.08
HLA-CQ95604 EZH1-201ENST00000415827 4608 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
HLA-CQ95604 CDH17-202ENST00000441892 2204 ntTSL 2 BASIC8.3□□□□□ -1.08
HLA-CQ95604 KIAA0391-205ENST00000603544 2232 ntTSL 5 BASIC8.3□□□□□ -1.08
HLA-CQ95604 AC091940.1-204ENST00000507318 3091 ntTSL 2 BASIC8.3□□□□□ -1.08
HLA-CQ95604 POLR1B-204ENST00000417433 3836 ntTSL 2 BASIC8.3□□□□□ -1.08
HLA-CQ95604 EPB41L5-202ENST00000331393 1777 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
HLA-CQ95604 AC093297.3-201ENST00000607056 2517 ntBASIC8.3□□□□□ -1.08
HLA-CQ95604 KIF13A-204ENST00000378826 5747 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
HLA-CQ95604 GABRA1-219ENST00000638112 2818 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
HLA-CQ95604 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
HLA-CQ95604 TRIO-201ENST00000344135 4065 ntTSL 2 BASIC8.29□□□□□ -1.08
HLA-CQ95604 SAMD8-201ENST00000372687 6935 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
HLA-CQ95604 SYNE3-205ENST00000557275 13488 ntAPPRIS ALT1 TSL 2 BASIC8.29□□□□□ -1.08
HLA-CQ95604 EYA3-203ENST00000373871 6085 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
HLA-CQ95604 YAP1-203ENST00000524575 1638 ntTSL 2 BASIC8.29□□□□□ -1.08
HLA-CQ95604 LNP1-203ENST00000489752 1813 ntTSL 5 BASIC8.29□□□□□ -1.08
HLA-CQ95604 OR9M1P-202ENST00000641564 3163 ntBASIC8.29□□□□□ -1.08
HLA-CQ95604 ONECUT2-202ENST00000491143 16121 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
HLA-CQ95604 HGF-209ENST00000457544 2249 ntAPPRIS ALT1 TSL 1 (best) BASIC8.29□□□□□ -1.08
HLA-CQ95604 DNALI1-201ENST00000296218 2649 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
HLA-CQ95604 PDLIM5-222ENST00000615540 6219 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
HLA-CQ95604 FLJ31356-202ENST00000445878 3001 ntTSL 4 BASIC8.29□□□□□ -1.08
HLA-CQ95604 GABRB3-216ENST00000628124 5581 ntTSL 2 BASIC8.29□□□□□ -1.08
HLA-CQ95604 SYTL4-202ENST00000276141 3737 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
HLA-CQ95604 PAIP2B-201ENST00000244221 6279 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
HLA-CQ95604 RBMX2P2-201ENST00000257020 946 ntBASIC8.29□□□□□ -1.08
HLA-CQ95604 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
HLA-CQ95604 RNU5D-1-201ENST00000363299 116 ntBASIC8.29□□□□□ -1.08
HLA-CQ95604 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC8.29□□□□□ -1.08
HLA-CQ95604 RNU6-780P-201ENST00000391030 104 ntBASIC8.29□□□□□ -1.08
HLA-CQ95604 AL358942.1-201ENST00000418595 1178 ntBASIC8.29□□□□□ -1.08
HLA-CQ95604 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
HLA-CQ95604 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC8.29□□□□□ -1.08
HLA-CQ95604 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC8.29□□□□□ -1.08
HLA-CQ95604 AC002066.1-202ENST00000439070 699 ntTSL 3 BASIC8.29□□□□□ -1.08
HLA-CQ95604 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC8.29□□□□□ -1.08
HLA-CQ95604 HMGB3P9-201ENST00000441799 583 ntBASIC8.29□□□□□ -1.08
HLA-CQ95604 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC8.29□□□□□ -1.08
HLA-CQ95604 CALM1P2-201ENST00000452941 448 ntBASIC8.29□□□□□ -1.08
HLA-CQ95604 RANP1-206ENST00000455094 651 ntBASIC8.29□□□□□ -1.08
HLA-CQ95604 CBX5P1-201ENST00000468470 561 ntBASIC8.29□□□□□ -1.08
HLA-CQ95604 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC8.29□□□□□ -1.08
HLA-CQ95604 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC8.29□□□□□ -1.08
HLA-CQ95604 OR9A3P-202ENST00000485185 878 ntBASIC8.29□□□□□ -1.08
HLA-CQ95604 ZNF695-204ENST00000487338 826 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
HLA-CQ95604 AC096576.1-201ENST00000489014 359 ntBASIC8.29□□□□□ -1.08
HLA-CQ95604 ACTR3BP4-201ENST00000503033 1244 ntBASIC8.29□□□□□ -1.08
HLA-CQ95604 NAF1-205ENST00000509434 385 ntTSL 3 BASIC8.29□□□□□ -1.08
HLA-CQ95604 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC8.29□□□□□ -1.08
HLA-CQ95604 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC8.29□□□□□ -1.08
HLA-CQ95604 AC090835.1-201ENST00000515189 1024 ntBASIC8.29□□□□□ -1.08
HLA-CQ95604 HSPA8P13-201ENST00000523715 472 ntBASIC8.29□□□□□ -1.08
HLA-CQ95604 RBMS2P1-201ENST00000525031 1226 ntBASIC8.29□□□□□ -1.08
HLA-CQ95604 OR5M7P-201ENST00000526140 972 ntBASIC8.29□□□□□ -1.08
HLA-CQ95604 AL109628.1-201ENST00000556877 366 ntBASIC8.29□□□□□ -1.08
HLA-CQ95604 AC126335.1-201ENST00000568414 510 ntTSL 2 BASIC8.29□□□□□ -1.08
HLA-CQ95604 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC8.29□□□□□ -1.08
HLA-CQ95604 AC137800.2-201ENST00000574375 120 ntBASIC8.29□□□□□ -1.08
HLA-CQ95604 AC136618.2-201ENST00000575091 400 ntBASIC8.29□□□□□ -1.08
HLA-CQ95604 AC005154.1-225ENST00000581665 564 ntTSL 4 BASIC8.29□□□□□ -1.08
HLA-CQ95604 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC8.29□□□□□ -1.08
HLA-CQ95604 AC005262.1-201ENST00000588562 362 ntBASIC8.29□□□□□ -1.08
HLA-CQ95604 GMFG-204ENST00000595636 487 ntTSL 2 BASIC8.29□□□□□ -1.08
HLA-CQ95604 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC8.29□□□□□ -1.08
HLA-CQ95604 MLECP1-201ENST00000615893 709 ntBASIC8.29□□□□□ -1.08
HLA-CQ95604 AP001442.1-201ENST00000617755 659 ntTSL 5 BASIC8.29□□□□□ -1.08
HLA-CQ95604 AC073862.4-201ENST00000622982 854 ntBASIC8.29□□□□□ -1.08
HLA-CQ95604 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC8.29□□□□□ -1.08
HLA-CQ95604 SLC8A1-AS1-228ENST00000627210 225 ntTSL 5 BASIC8.29□□□□□ -1.08
HLA-CQ95604 PPP3R2-202ENST00000636434 1081 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
HLA-CQ95604 SLC11A2-202ENST00000262052 4132 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
HLA-CQ95604 HSPA8P17-201ENST00000427029 1382 ntBASIC8.29□□□□□ -1.08
HLA-CQ95604 Z83820.1-201ENST00000456978 1499 ntBASIC8.29□□□□□ -1.08
HLA-CQ95604 AC007923.2-201ENST00000584218 1591 ntBASIC8.29□□□□□ -1.08
HLA-CQ95604 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
HLA-CQ95604 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
HLA-CQ95604 NUP210L-202ENST00000368553 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
HLA-CQ95604 KIF2C-201ENST00000372217 2955 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
HLA-CQ95604 DLEU1-212ENST00000469754 2955 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
HLA-CQ95604 TFDP2-224ENST00000499676 9335 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
HLA-CQ95604 GRIK2-207ENST00000421544 4789 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
HLA-CQ95604 NLGN4Y-203ENST00000382868 5338 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
HLA-CQ95604 AC105760.1-201ENST00000244820 2231 ntTSL 2 BASIC8.29□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms