Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC7.23□□□□□ -1.25
SNED1Q8TER0 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
SNED1Q8TER0 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
SNED1Q8TER0 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
SNED1Q8TER0 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC7.23□□□□□ -1.25
SNED1Q8TER0 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC7.23□□□□□ -1.25
SNED1Q8TER0 LINC01963-201ENST00000562038 3148 ntBASIC7.23□□□□□ -1.25
SNED1Q8TER0 AL391261.1-201ENST00000555712 1479 ntBASIC7.23□□□□□ -1.25
SNED1Q8TER0 MRM2-202ENST00000407040 582 ntTSL 3 BASIC7.23□□□□□ -1.25
SNED1Q8TER0 RPS4XP5-201ENST00000419038 768 ntBASIC7.23□□□□□ -1.25
SNED1Q8TER0 TNPO1P1-201ENST00000423641 1138 ntBASIC7.23□□□□□ -1.25
SNED1Q8TER0 AC113412.1-201ENST00000425840 504 ntBASIC7.23□□□□□ -1.25
SNED1Q8TER0 NIPA2P1-201ENST00000426223 976 ntBASIC7.23□□□□□ -1.25
SNED1Q8TER0 SERPINA7P1-201ENST00000443077 631 ntBASIC7.23□□□□□ -1.25
SNED1Q8TER0 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC7.23□□□□□ -1.25
SNED1Q8TER0 BX510359.5-201ENST00000515651 304 ntBASIC7.23□□□□□ -1.25
SNED1Q8TER0 RNA5SP92-201ENST00000516437 110 ntBASIC7.23□□□□□ -1.25
SNED1Q8TER0 OR4A40P-201ENST00000533878 948 ntBASIC7.23□□□□□ -1.25
SNED1Q8TER0 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC7.23□□□□□ -1.25
SNED1Q8TER0 AL390726.5-202ENST00000564800 256 ntBASIC7.23□□□□□ -1.25
SNED1Q8TER0 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC7.23□□□□□ -1.25
SNED1Q8TER0 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC7.23□□□□□ -1.25
SNED1Q8TER0 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC7.23□□□□□ -1.25
SNED1Q8TER0 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC7.23□□□□□ -1.25
SNED1Q8TER0 FKBP1AP1-201ENST00000594588 318 ntBASIC7.23□□□□□ -1.25
SNED1Q8TER0 AL021368.3-201ENST00000607119 578 ntBASIC7.23□□□□□ -1.25
SNED1Q8TER0 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC7.23□□□□□ -1.25
SNED1Q8TER0 AC007683.2-201ENST00000624681 714 ntBASIC7.23□□□□□ -1.25
SNED1Q8TER0 PARP4P2-201ENST00000446672 3326 ntBASIC7.23□□□□□ -1.25
SNED1Q8TER0 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
SNED1Q8TER0 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
SNED1Q8TER0 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
SNED1Q8TER0 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
SNED1Q8TER0 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
SNED1Q8TER0 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC7.23□□□□□ -1.25
SNED1Q8TER0 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
SNED1Q8TER0 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
SNED1Q8TER0 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
SNED1Q8TER0 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
SNED1Q8TER0 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC7.23□□□□□ -1.25
SNED1Q8TER0 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
SNED1Q8TER0 PABPC1P8-201ENST00000452851 2086 ntBASIC7.22□□□□□ -1.25
SNED1Q8TER0 AC096921.2-201ENST00000561507 1916 ntBASIC7.22□□□□□ -1.25
SNED1Q8TER0 YES1P1-201ENST00000418510 1628 ntBASIC7.22□□□□□ -1.25
SNED1Q8TER0 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
SNED1Q8TER0 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
SNED1Q8TER0 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
SNED1Q8TER0 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
SNED1Q8TER0 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC7.22□□□□□ -1.25
SNED1Q8TER0 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC7.22□□□□□ -1.25
SNED1Q8TER0 SALL4P7-201ENST00000555779 3120 ntBASIC7.22□□□□□ -1.25
SNED1Q8TER0 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
SNED1Q8TER0 OR5W1P-201ENST00000423705 938 ntBASIC7.22□□□□□ -1.25
SNED1Q8TER0 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC7.22□□□□□ -1.25
SNED1Q8TER0 RANP1-206ENST00000455094 651 ntBASIC7.22□□□□□ -1.25
SNED1Q8TER0 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC7.22□□□□□ -1.25
SNED1Q8TER0 AC009120.1-201ENST00000493458 473 ntBASIC7.22□□□□□ -1.25
SNED1Q8TER0 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
SNED1Q8TER0 IGBP1P1-201ENST00000554337 1009 ntBASIC7.22□□□□□ -1.25
SNED1Q8TER0 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC7.22□□□□□ -1.25
SNED1Q8TER0 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
SNED1Q8TER0 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC7.22□□□□□ -1.25
SNED1Q8TER0 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC7.22□□□□□ -1.25
SNED1Q8TER0 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
SNED1Q8TER0 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC7.22□□□□□ -1.25
SNED1Q8TER0 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC7.22□□□□□ -1.25
SNED1Q8TER0 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC7.22□□□□□ -1.25
SNED1Q8TER0 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
SNED1Q8TER0 AL391262.1-201ENST00000556558 1992 ntBASIC7.22□□□□□ -1.25
SNED1Q8TER0 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
SNED1Q8TER0 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC7.22□□□□□ -1.25
SNED1Q8TER0 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
SNED1Q8TER0 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
SNED1Q8TER0 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
SNED1Q8TER0 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
SNED1Q8TER0 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
SNED1Q8TER0 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
SNED1Q8TER0 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
SNED1Q8TER0 SRRM1P3-201ENST00000426911 2678 ntBASIC7.22□□□□□ -1.25
SNED1Q8TER0 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC7.21□□□□□ -1.25
SNED1Q8TER0 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.25
SNED1Q8TER0 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
SNED1Q8TER0 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.25
SNED1Q8TER0 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.25
SNED1Q8TER0 AC011504.1-201ENST00000623331 4103 ntBASIC7.21□□□□□ -1.25
SNED1Q8TER0 EBLN2-201ENST00000533473 1679 ntAPPRIS P1 BASIC7.21□□□□□ -1.25
SNED1Q8TER0 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
SNED1Q8TER0 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
SNED1Q8TER0 AL645927.1-201ENST00000396783 406 ntBASIC7.21□□□□□ -1.25
SNED1Q8TER0 RN7SKP216-201ENST00000411050 312 ntBASIC7.21□□□□□ -1.25
SNED1Q8TER0 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC7.21□□□□□ -1.25
SNED1Q8TER0 EEF1B2P5-201ENST00000444820 548 ntBASIC7.21□□□□□ -1.25
SNED1Q8TER0 AC103563.5-201ENST00000455643 364 ntBASIC7.21□□□□□ -1.25
SNED1Q8TER0 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC7.21□□□□□ -1.25
SNED1Q8TER0 RN7SL860P-201ENST00000473738 223 ntBASIC7.21□□□□□ -1.25
SNED1Q8TER0 RN7SL222P-201ENST00000476452 299 ntBASIC7.21□□□□□ -1.25
SNED1Q8TER0 AC253576.1-201ENST00000511645 1156 ntBASIC7.21□□□□□ -1.25
SNED1Q8TER0 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC7.21□□□□□ -1.25
SNED1Q8TER0 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC7.21□□□□□ -1.25
SNED1Q8TER0 OR4H6P-201ENST00000563771 921 ntBASIC7.21□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms