Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CCDC71Q8IV32 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
CCDC71Q8IV32 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.79□□□□□ -1.48
CCDC71Q8IV32 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC71Q8IV32 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC71Q8IV32 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC71Q8IV32 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CCDC71Q8IV32 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CCDC71Q8IV32 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC71Q8IV32 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC71Q8IV32 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC5.78□□□□□ -1.48
CCDC71Q8IV32 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.78□□□□□ -1.48
CCDC71Q8IV32 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC71Q8IV32 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC71Q8IV32 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC71Q8IV32 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.78□□□□□ -1.48
CCDC71Q8IV32 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.78□□□□□ -1.48
CCDC71Q8IV32 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.78□□□□□ -1.48
CCDC71Q8IV32 RN7SKP151-201ENST00000410230 316 ntBASIC5.78□□□□□ -1.48
CCDC71Q8IV32 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.78□□□□□ -1.48
CCDC71Q8IV32 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.78□□□□□ -1.48
CCDC71Q8IV32 AC002127.1-201ENST00000421305 225 ntBASIC5.78□□□□□ -1.48
CCDC71Q8IV32 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.78□□□□□ -1.48
CCDC71Q8IV32 RPL7AP14-201ENST00000424041 802 ntBASIC5.78□□□□□ -1.48
CCDC71Q8IV32 AL354707.3-201ENST00000427308 331 ntBASIC5.78□□□□□ -1.48
CCDC71Q8IV32 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC71Q8IV32 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.78□□□□□ -1.48
CCDC71Q8IV32 DNAJA1P5-201ENST00000440278 943 ntBASIC5.78□□□□□ -1.48
CCDC71Q8IV32 RPL5P7-201ENST00000444235 813 ntBASIC5.78□□□□□ -1.48
CCDC71Q8IV32 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC5.78□□□□□ -1.48
CCDC71Q8IV32 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.78□□□□□ -1.48
CCDC71Q8IV32 AC018638.3-201ENST00000461273 132 ntBASIC5.78□□□□□ -1.48
CCDC71Q8IV32 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
CCDC71Q8IV32 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC71Q8IV32 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.78□□□□□ -1.48
CCDC71Q8IV32 AC009879.1-201ENST00000520029 839 ntBASIC5.78□□□□□ -1.48
CCDC71Q8IV32 AP004609.2-201ENST00000532177 190 ntBASIC5.78□□□□□ -1.48
CCDC71Q8IV32 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.78□□□□□ -1.48
CCDC71Q8IV32 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC5.78□□□□□ -1.48
CCDC71Q8IV32 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC5.78□□□□□ -1.48
CCDC71Q8IV32 AL138895.2-201ENST00000603019 178 ntBASIC5.78□□□□□ -1.48
CCDC71Q8IV32 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC5.78□□□□□ -1.48
CCDC71Q8IV32 AC093388.1-201ENST00000609166 430 ntBASIC5.78□□□□□ -1.48
CCDC71Q8IV32 AC073488.6-201ENST00000632293 754 ntBASIC5.78□□□□□ -1.48
CCDC71Q8IV32 LINC02495-203ENST00000636704 242 ntBASIC5.78□□□□□ -1.48
CCDC71Q8IV32 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC5.78□□□□□ -1.48
CCDC71Q8IV32 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC71Q8IV32 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
CCDC71Q8IV32 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
CCDC71Q8IV32 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
CCDC71Q8IV32 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
CCDC71Q8IV32 GTF2IP4-201ENST00000453092 2054 ntBASIC5.78□□□□□ -1.48
CCDC71Q8IV32 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.48
CCDC71Q8IV32 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.77□□□□□ -1.49
CCDC71Q8IV32 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.77□□□□□ -1.49
CCDC71Q8IV32 MSL3P1-202ENST00000440028 1468 ntBASIC5.77□□□□□ -1.49
CCDC71Q8IV32 AL121839.2-201ENST00000565058 6943 ntBASIC5.77□□□□□ -1.49
CCDC71Q8IV32 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC71Q8IV32 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC71Q8IV32 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.77□□□□□ -1.49
CCDC71Q8IV32 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC71Q8IV32 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC71Q8IV32 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.77□□□□□ -1.49
CCDC71Q8IV32 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.77□□□□□ -1.49
CCDC71Q8IV32 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
CCDC71Q8IV32 SMC4P1-201ENST00000414479 527 ntBASIC5.77□□□□□ -1.49
CCDC71Q8IV32 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.77□□□□□ -1.49
CCDC71Q8IV32 AC016027.5-201ENST00000427227 210 ntBASIC5.77□□□□□ -1.49
CCDC71Q8IV32 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.77□□□□□ -1.49
CCDC71Q8IV32 CXCR2P1-202ENST00000443392 1074 ntBASIC5.77□□□□□ -1.49
CCDC71Q8IV32 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.77□□□□□ -1.49
CCDC71Q8IV32 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.77□□□□□ -1.49
CCDC71Q8IV32 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.77□□□□□ -1.49
CCDC71Q8IV32 AC094085.1-201ENST00000468914 584 ntBASIC5.77□□□□□ -1.49
CCDC71Q8IV32 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.77□□□□□ -1.49
CCDC71Q8IV32 SNX18P25-201ENST00000510539 758 ntBASIC5.77□□□□□ -1.49
CCDC71Q8IV32 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.77□□□□□ -1.49
CCDC71Q8IV32 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC71Q8IV32 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.77□□□□□ -1.49
CCDC71Q8IV32 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.77□□□□□ -1.49
CCDC71Q8IV32 AC008055.1-201ENST00000547032 609 ntBASIC5.77□□□□□ -1.49
CCDC71Q8IV32 AC023968.1-201ENST00000560719 475 ntBASIC5.77□□□□□ -1.49
CCDC71Q8IV32 AC009120.3-201ENST00000563335 499 ntBASIC5.77□□□□□ -1.49
CCDC71Q8IV32 AC002519.2-203ENST00000567043 837 ntBASIC5.77□□□□□ -1.49
CCDC71Q8IV32 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.77□□□□□ -1.49
CCDC71Q8IV32 AC090616.1-201ENST00000583895 447 ntBASIC5.77□□□□□ -1.49
CCDC71Q8IV32 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.77□□□□□ -1.49
CCDC71Q8IV32 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.77□□□□□ -1.49
CCDC71Q8IV32 MIR6085-201ENST00000618314 110 ntBASIC5.77□□□□□ -1.49
CCDC71Q8IV32 MIR6811-201ENST00000620409 58 ntBASIC5.77□□□□□ -1.49
CCDC71Q8IV32 AP000550.3-201ENST00000637734 379 ntBASIC5.77□□□□□ -1.49
CCDC71Q8IV32 AP001153.1-201ENST00000641024 338 ntBASIC5.77□□□□□ -1.49
CCDC71Q8IV32 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC71Q8IV32 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC5.77□□□□□ -1.49
CCDC71Q8IV32 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC71Q8IV32 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC71Q8IV32 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC71Q8IV32 HDAC1P2-201ENST00000453661 1398 ntBASIC5.77□□□□□ -1.49
CCDC71Q8IV32 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.77□□□□□ -1.49
CCDC71Q8IV32 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms