Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HIST1H1AQ02539 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HIST1H1AQ02539 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HIST1H1AQ02539 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HIST1H1AQ02539 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC4.69□□□□□ -1.66
HIST1H1AQ02539 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HIST1H1AQ02539 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC4.69□□□□□ -1.66
HIST1H1AQ02539 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC4.69□□□□□ -1.66
HIST1H1AQ02539 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
HIST1H1AQ02539 AL359955.1-201ENST00000455242 3275 ntBASIC4.69□□□□□ -1.66
HIST1H1AQ02539 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC4.69□□□□□ -1.66
HIST1H1AQ02539 RNA5SP485-201ENST00000365053 119 ntBASIC4.69□□□□□ -1.66
HIST1H1AQ02539 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC4.69□□□□□ -1.66
HIST1H1AQ02539 AL121977.1-201ENST00000401636 979 ntBASIC4.69□□□□□ -1.66
HIST1H1AQ02539 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC4.69□□□□□ -1.66
HIST1H1AQ02539 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC4.69□□□□□ -1.66
HIST1H1AQ02539 HMGN1P32-201ENST00000441744 256 ntBASIC4.69□□□□□ -1.66
HIST1H1AQ02539 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC4.69□□□□□ -1.66
HIST1H1AQ02539 GAPDHP37-201ENST00000442317 968 ntBASIC4.69□□□□□ -1.66
HIST1H1AQ02539 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC4.69□□□□□ -1.66
HIST1H1AQ02539 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC4.69□□□□□ -1.66
HIST1H1AQ02539 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HIST1H1AQ02539 RN7SL502P-201ENST00000481857 290 ntBASIC4.69□□□□□ -1.66
HIST1H1AQ02539 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC4.69□□□□□ -1.66
HIST1H1AQ02539 MORF4L2P1-201ENST00000503761 858 ntBASIC4.69□□□□□ -1.66
HIST1H1AQ02539 AC018645.1-201ENST00000505003 109 ntBASIC4.69□□□□□ -1.66
HIST1H1AQ02539 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC4.69□□□□□ -1.66
HIST1H1AQ02539 FTH1P11-201ENST00000517577 551 ntBASIC4.69□□□□□ -1.66
HIST1H1AQ02539 AL133399.1-201ENST00000527476 298 ntBASIC4.69□□□□□ -1.66
HIST1H1AQ02539 RPA2P3-201ENST00000533268 770 ntBASIC4.69□□□□□ -1.66
HIST1H1AQ02539 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC4.69□□□□□ -1.66
HIST1H1AQ02539 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
HIST1H1AQ02539 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC4.69□□□□□ -1.66
HIST1H1AQ02539 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC4.69□□□□□ -1.66
HIST1H1AQ02539 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC4.69□□□□□ -1.66
HIST1H1AQ02539 AC027334.1-201ENST00000603257 310 ntBASIC4.69□□□□□ -1.66
HIST1H1AQ02539 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC4.69□□□□□ -1.66
HIST1H1AQ02539 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC4.69□□□□□ -1.66
HIST1H1AQ02539 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC4.69□□□□□ -1.66
HIST1H1AQ02539 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC4.69□□□□□ -1.66
HIST1H1AQ02539 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
HIST1H1AQ02539 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
HIST1H1AQ02539 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.69□□□□□ -1.66
HIST1H1AQ02539 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
HIST1H1AQ02539 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.69□□□□□ -1.66
HIST1H1AQ02539 OR9K1P-202ENST00000641111 3217 ntBASIC4.69□□□□□ -1.66
HIST1H1AQ02539 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
HIST1H1AQ02539 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC4.69□□□□□ -1.66
HIST1H1AQ02539 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HIST1H1AQ02539 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HIST1H1AQ02539 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC4.69□□□□□ -1.66
HIST1H1AQ02539 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
HIST1H1AQ02539 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HIST1H1AQ02539 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HIST1H1AQ02539 EEF1A1P14-201ENST00000421195 1376 ntBASIC4.68□□□□□ -1.66
HIST1H1AQ02539 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
HIST1H1AQ02539 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HIST1H1AQ02539 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HIST1H1AQ02539 AC133552.1-201ENST00000569988 4007 ntBASIC4.68□□□□□ -1.66
HIST1H1AQ02539 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
HIST1H1AQ02539 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HIST1H1AQ02539 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HIST1H1AQ02539 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HIST1H1AQ02539 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HIST1H1AQ02539 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
HIST1H1AQ02539 RN7SKP257-201ENST00000364525 309 ntBASIC4.68□□□□□ -1.66
HIST1H1AQ02539 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HIST1H1AQ02539 RNA5SP187-201ENST00000384400 119 ntBASIC4.68□□□□□ -1.66
HIST1H1AQ02539 AC015977.1-201ENST00000418887 292 ntBASIC4.68□□□□□ -1.66
HIST1H1AQ02539 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.68□□□□□ -1.66
HIST1H1AQ02539 FTO-202ENST00000431610 707 ntTSL 3 BASIC4.68□□□□□ -1.66
HIST1H1AQ02539 GTF3AP6-201ENST00000432585 986 ntBASIC4.68□□□□□ -1.66
HIST1H1AQ02539 PSMD8P1-201ENST00000436275 769 ntBASIC4.68□□□□□ -1.66
HIST1H1AQ02539 EMC3-AS1-205ENST00000438698 534 ntBASIC4.68□□□□□ -1.66
HIST1H1AQ02539 GTF2IP14-201ENST00000441415 586 ntBASIC4.68□□□□□ -1.66
HIST1H1AQ02539 AC016908.1-201ENST00000442571 1219 ntBASIC4.68□□□□□ -1.66
HIST1H1AQ02539 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC4.68□□□□□ -1.66
HIST1H1AQ02539 PPIAP32-201ENST00000449940 472 ntBASIC4.68□□□□□ -1.66
HIST1H1AQ02539 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC4.68□□□□□ -1.66
HIST1H1AQ02539 UCK2-205ENST00000469256 753 ntTSL 3 BASIC4.68□□□□□ -1.66
HIST1H1AQ02539 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC4.68□□□□□ -1.66
HIST1H1AQ02539 AC015524.1-201ENST00000491585 472 ntBASIC4.68□□□□□ -1.66
HIST1H1AQ02539 AC018639.1-201ENST00000492994 442 ntBASIC4.68□□□□□ -1.66
HIST1H1AQ02539 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC4.68□□□□□ -1.66
HIST1H1AQ02539 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HIST1H1AQ02539 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC4.68□□□□□ -1.66
HIST1H1AQ02539 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC4.68□□□□□ -1.66
HIST1H1AQ02539 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC4.68□□□□□ -1.66
HIST1H1AQ02539 AC084851.2-201ENST00000530377 364 ntBASIC4.68□□□□□ -1.66
HIST1H1AQ02539 AC092865.1-201ENST00000544395 1023 ntBASIC4.68□□□□□ -1.66
HIST1H1AQ02539 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC4.68□□□□□ -1.66
HIST1H1AQ02539 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC4.68□□□□□ -1.66
HIST1H1AQ02539 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC4.68□□□□□ -1.66
HIST1H1AQ02539 NPM1P42-201ENST00000560329 862 ntBASIC4.68□□□□□ -1.66
HIST1H1AQ02539 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC4.68□□□□□ -1.66
HIST1H1AQ02539 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC4.68□□□□□ -1.66
HIST1H1AQ02539 NPIPB1P-202ENST00000588786 828 ntBASIC4.68□□□□□ -1.66
HIST1H1AQ02539 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC4.68□□□□□ -1.66
HIST1H1AQ02539 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC4.68□□□□□ -1.66
HIST1H1AQ02539 AC005332.4-201ENST00000592752 579 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms